RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 PEPDP12955 493 aa13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 ZNF14P17017 642 aaPredicted RBP13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 HOXB8P17481 243 aaPredicted RBP13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 CXCR4P61073 352 aa13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 ZNF169Q14929 603 aaPredicted RBP13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 TBCEQ15813 527 aaPredicted RBP13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 VN1R5Q7Z5H4 357 aa13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 ZNF655Q8N720 491 aaPredicted RBP13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 POP5Q969H6 163 aaKnown RBP13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 OR2A14Q96R47 310 aa13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 NUSAP1Q9BXS6 441 aaKnown RBP13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 RBFOX1Q9NWB1 397 aaKnown RBP13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 OR6C2Q9NZP2 312 aa13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 UTS2RQ9UKP6 389 aa13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 A0A0X1KG70 313 aa13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 CDC7O00311 574 aa13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 KPNA3O00505 521 aaPredicted RBP13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 ZNF197O14709 1029 aa13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 SLC9A3R1O14745 358 aaPredicted RBP13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 SHOXO15266 292 aa13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 RAF1P04049 648 aa13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 ALPIP09923 528 aa13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 CHMP24386 653 aa13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 ACSM2AQ08AH3 577 aa13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 ACSM2BQ68CK6 577 aa13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 SHQ1Q6PI26 577 aaKnown RBP13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 TMEM17Q86X19 198 aa13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 RPLP0P6Q8NHW5 317 aa13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 ATG4CQ96DT6 458 aa13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 SPATA33Q96N06 139 aa13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 CRB3Q9BUF7 120 aa13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 PLAC1Q9HBJ0 212 aa13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 UXTQ9UBK9 157 aaPredicted RBP13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 TMX2Q9Y320 296 aa13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 RGPD8O14715 1765 aaPredicted RBP13.14□□□□□ -0.31
PPP4R3B-205ENST00000616288 CLDN5O00501 218 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 DEFA6Q01524 100 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 GHRHRQ02643 423 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 ABRQ12979 859 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 TRIM40Q6P9F5 258 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 TEX261Q6UWH6 196 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 NIPA1Q7RTP0 329 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 GPALPP1Q8IXQ4 340 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 SAMD12Q8N8I0 201 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 GGHQ92820 318 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 OR5M11Q96RB7 305 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 COPS8Q99627 209 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 PRDM9Q9NQV7 894 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 PPP2R3BQ9Y5P8 575 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 U3KQ87 197 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 CLIC1O00299 241 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 MPZL2O60487 215 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 ECI2O75521 394 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 GADD45GO95257 159 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 ARIH2O95376 493 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 MATN4O95460 622 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 MAOBP27338 520 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 CD6P30203 668 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 CLCN4P51793 760 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 KEAP1Q14145 624 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 PARP15Q460N3 678 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 KLHL22Q53GT1 634 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 KIAA0930Q6ICG6 404 aaPredicted RBP13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 ZNF425Q6IV72 752 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 FAM196AQ6ZSG2 479 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 PELOQ9BRX2 385 aaKnown RBP13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 MS4A7Q9GZW8 240 aaPredicted RBP13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 CDT1Q9H211 546 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 SLC28A3Q9HAS3 691 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 NMRK2Q9NPI5 230 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 RPL36Q9Y3U8 105 aaKnown RBP13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 SLC28A1O00337 649 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 OR1I1O60431 355 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 HCN1O60741 890 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 C1QAP02745 245 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 EPB42P16452 691 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 PTPRAP18433 802 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 GRIK2Q13002 908 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 PYCR3Q53H96 274 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 ZNF789Q5FWF6 425 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 ATAT1Q5SQI0 421 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 FAM182BQ5T319 152 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 CLEC14AQ86T13 490 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 TMEM80Q96HE8 168 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 SPNS1Q9H2V7 528 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 ARNT2Q9HBZ2 717 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 SMPD4Q9NXE4 827 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 MRPL15Q9P015 296 aaKnown RBP13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 RHCGQ9UBD6 479 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 STUB1Q9UNE7 303 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 POFUT2Q9Y2G5 429 aa13.13□□□□□ -0.31
PPP4R3B-205ENST00000616288 ARHGAP33O14559 1287 aa13.12□□□□□ -0.31
PPP4R3B-205ENST00000616288 TPST2O60704 377 aa13.12□□□□□ -0.31
PPP4R3B-205ENST00000616288 TRIM3O75382 744 aaPredicted RBP13.12□□□□□ -0.31
PPP4R3B-205ENST00000616288 PRKCGP05129 697 aa13.12□□□□□ -0.31
PPP4R3B-205ENST00000616288 ZNF3P17036 446 aa13.12□□□□□ -0.31
PPP4R3B-205ENST00000616288 RPS19P39019 145 aaKnown RBP13.12□□□□□ -0.31
PPP4R3B-205ENST00000616288 EPHA5P54756 1037 aa13.12□□□□□ -0.31
PPP4R3B-205ENST00000616288 RCAN2Q14206 197 aa13.12□□□□□ -0.31
PPP4R3B-205ENST00000616288 ATXN7L3Q14CW9 347 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms