RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 IP6K3Q96PC2 410 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 HDHD5Q9BXW7 423 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 SLC46A2Q9BY10 475 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 SLC6A14Q9UN76 642 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 FOXE1O00358 373 aaPredicted RBP9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 SEC24AO95486 1093 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 TGFB1P01137 390 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 MATN1P21941 496 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 P2RY2P41231 377 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 IDH2P48735 452 aaKnown RBP9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 SEC23BQ15437 767 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 MZT2BQ6NZ67 158 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 IZUMO2Q6UXV1 221 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 LRRC25Q8N386 305 aaPredicted RBP9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 PAAF1Q9BRP4 392 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 CWH43Q9H720 699 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 TIMMDC1Q9NPL8 285 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 HEBP1Q9NRV9 189 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 IKZF2Q9UKS7 526 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 WNK3Q9BYP7 1800 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 H0YJX3 145 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 EMC8O43402 210 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 SNX3O60493 162 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 CDK9P50750 372 aaKnown RBP9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 KLF10Q13118 480 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 SNAPC1Q16533 368 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 PNCKQ6P2M8 343 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 SPESP1Q6UW49 350 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 C1orf52Q8N6N3 182 aaKnown RBP9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 POU5F2Q8N7G0 328 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 SNX33Q8WV41 574 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 MYLIPQ8WY64 445 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 DTD2Q96FN9 168 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 ZNF831Q5JPB2 1677 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 PRSS38A1L453 326 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 NPIPA2E9PIF3 369 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 NPIPA3F8WFD2 350 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 HOXC11O43248 304 aaPredicted RBP9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 HCRTO43612 131 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 CACNG3O60359 315 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 PRAMEF2O60811 474 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 KRT36O76013 467 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 ZNF37AP17032 561 aaPredicted RBP9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 ERVFC1P60507 584 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 TRAP1Q12931 704 aaKnown RBP9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 MELKQ14680 651 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 MAPK11Q15759 364 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 ARL13AQ5H913 290 aaPredicted RBP9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 TICAM1Q8IUC6 712 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 OR8K5Q8NH50 307 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 WDR60Q8WVS4 1066 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 TANKQ92844 425 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 DDIT4LQ96D03 193 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 MRGPRX2Q96LB1 330 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 LENG8Q96PV6 779 aaPredicted RBP9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 ZNF382Q96SR6 550 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 REEP4Q9H6H4 257 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 IRAK3Q9Y616 596 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 CXorf51AA0A1B0GTR3 108 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 A8MVJ9 347 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 CCL22O00626 93 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 AQP9O43315 295 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 MTX2O75431 263 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 PPM1BO75688 479 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 CD2P06729 351 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 OTX2P32243 289 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 CAPGP40121 348 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 CCR5P51681 352 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 USP46P62068 366 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 MZT1Q08AG7 82 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 ST3GAL3Q11203 375 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 CAMK1Q14012 370 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 OR4C11Q6IEV9 310 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 LSMEM2Q8N112 164 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 UBE2J2Q8N2K1 259 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 PNLDC1Q8NA58 520 aaKnown RBP9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 HPF1Q9NWY4 346 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 MAU2Q9Y6X3 613 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 CXCR6O00574 342 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 AREL1O15033 823 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 SERPINA1P01009 418 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 ASGR2P07307 311 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 CHRM1P11229 460 aaPredicted RBP9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 HSD11B1P28845 292 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 HOXD13P35453 343 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 RPS9P46781 194 aaKnown RBP9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 KIAA1024LP59773 190 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 MYBPC3Q14896 1274 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 C6orf120Q7Z4R8 191 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 YTHDF3Q7Z739 585 aaKnown RBP9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 FAM86B1Q8N7N1 296 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 ZNF334Q9HCZ1 680 aaPredicted RBP9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 ZNF624Q9P2J8 865 aaPredicted RBP9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 PPM1HQ9ULR3 514 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 MED31Q9Y3C7 131 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 USP3Q9Y6I4 520 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 A0A1W2PPM1 405 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 PCDHGA12O60330 932 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 BEST1O76090 585 aa9.41□□□□□ -0.9
TNFRSF9-204ENST00000615230 GADD45GO95257 159 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms