RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 ZBED6CLQ96FA7 236 aaPredicted RBP13.38□□□□□ -0.27
CHD1-212ENST00000614616 C10orf90Q96M02 699 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 MGLLQ99685 303 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 BRINP2Q9C0B6 783 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.38□□□□□ -0.275e-9■■■■■ 28.8
CHD1-212ENST00000614616 DNAJC27Q9NZQ0 273 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 C10orf71Q711Q0 1435 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 TIAM2Q8IVF5 1701 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 TLX2O43763 284 aaPredicted RBP13.38□□□□□ -0.27
CHD1-212ENST00000614616 CD48P09326 243 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 CYCSP99999 105 aaKnown RBP13.38□□□□□ -0.27
CHD1-212ENST00000614616 LCN8Q6JVE9 175 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 ZBTB2Q8N680 514 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 DNASE1L2Q92874 299 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 GPR21Q99679 349 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 ULBP1Q9BZM6 244 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 SNX10Q9Y5X0 201 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 HSBP1L1C9JCN9 74 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 LRG1P02750 347 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 DBIP07108 87 aaKnown RBP13.37□□□□□ -0.27
CHD1-212ENST00000614616 PKMP14618 531 aaKnown RBP13.37□□□□□ -0.27
CHD1-212ENST00000614616 CCND3P30281 292 aaPredicted RBP13.37□□□□□ -0.27
CHD1-212ENST00000614616 AFF3P51826 1226 aaKnown RBP13.37□□□□□ -0.27
CHD1-212ENST00000614616 MRPS5P82675 430 aaKnown RBP13.37□□□□□ -0.27
CHD1-212ENST00000614616 ZDHHC20Q5W0Z9 365 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 STK35Q8TDR2 534 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 NR4A3Q92570 626 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 HSH2DQ96JZ2 352 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 SLC38A1Q9H2H9 487 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 OR51J1Q9H342 316 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.37□□□□□ -0.27
CHD1-212ENST00000614616 RBBP9O75884 186 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 NFKB2Q00653 900 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 TMEM132BQ14DG7 1078 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 NANOGP8Q6NSW7 305 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 CERS6Q6ZMG9 384 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 POGLUT1Q8NBL1 392 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 ARMC5Q96C12 935 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 ELMOD3Q96FG2 381 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 SLC39A13Q96H72 371 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 NANOGQ9H9S0 305 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 E7EQ34 232 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 GOSR2O14653 212 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 C22orf31O95567 290 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 UNGP13051 313 aaPredicted RBP13.37□□□□□ -0.27
CHD1-212ENST00000614616 PRKCAP17252 672 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 CACNG1Q06432 222 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 PARP16Q8N5Y8 322 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 ADAMTS15Q8TE58 950 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 C2orf49Q9BVC5 232 aaPredicted RBP13.37□□□□□ -0.27
CHD1-212ENST00000614616 OR51E2Q9H255 320 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 MARCH2Q9P0N8 246 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 VLDLRP98155 873 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 CHIT1Q13231 466 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 ATXN7L3Q14CW9 347 aaPredicted RBP13.37□□□□□ -0.27
CHD1-212ENST00000614616 ADGRG2Q8IZP9 1017 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 PCSK9Q8NBP7 692 aaKnown RBP13.37□□□□□ -0.27
CHD1-212ENST00000614616 MYO19Q96H55 970 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 DUSP26Q9BV47 211 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 RIC1Q4ADV7 1423 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 PRORSD1PA6NEY8 169 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 ADAM12O43184 909 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 TPT1P13693 172 aaKnown RBP13.37□□□□□ -0.27
CHD1-212ENST00000614616 RPIAP49247 311 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 SPHARQ15513 63 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 C9orf64Q5T6V5 341 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 PPP1R26Q5T8A7 1209 aaPredicted RBP13.37□□□□□ -0.27
CHD1-212ENST00000614616 CAPN13Q6MZZ7 669 aaPredicted RBP13.37□□□□□ -0.27
CHD1-212ENST00000614616 OR4Q3Q8NH05 313 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 C1QTNF7Q9BXJ2 289 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 RGPD5Q99666 1765 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 SBK2P0C263 348 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 FGF3P11487 239 aaPredicted RBP13.37□□□□□ -0.27
CHD1-212ENST00000614616 PARP15Q460N3 678 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 SPIN4Q56A73 249 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 COQ5Q5HYK3 327 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 SLC27A1Q6PCB7 646 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 GDPGP1Q6ZNW5 385 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 YIPF7Q8N8F6 280 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 PAPD5Q8NDF8 572 aaKnown RBP13.37□□□□□ -0.27
CHD1-212ENST00000614616 OR10H5Q8NGA6 315 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 SPPL2BQ8TCT7 592 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 SCGB1C1Q8TD33 95 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 TFAP2CQ92754 450 aa13.37□□□□□ -0.27
CHD1-212ENST00000614616 SMIM30A4D0T7 59 aa13.36□□□□□ -0.27
CHD1-212ENST00000614616 ZNF705GA8MUZ8 300 aaPredicted RBP13.36□□□□□ -0.27
CHD1-212ENST00000614616 ZNF208O43345 1280 aa13.36□□□□□ -0.27
CHD1-212ENST00000614616 SPATA31C1P0DKV0 1188 aa13.36□□□□□ -0.27
CHD1-212ENST00000614616 DLSTP36957 453 aa13.36□□□□□ -0.27
CHD1-212ENST00000614616 CDH11P55287 796 aa13.36□□□□□ -0.27
CHD1-212ENST00000614616 AVPI1Q5T686 147 aa13.36□□□□□ -0.27
CHD1-212ENST00000614616 OR8S1Q8NH09 359 aa13.36□□□□□ -0.27
CHD1-212ENST00000614616 ACO2Q99798 780 aaKnown RBP13.36□□□□□ -0.27
CHD1-212ENST00000614616 OR10H1Q9Y4A9 318 aa13.36□□□□□ -0.27
CHD1-212ENST00000614616 RGPD1P0DJD0 1748 aa13.36□□□□□ -0.27
CHD1-212ENST00000614616 DDX60Q8IY21 1712 aaKnown RBP13.36□□□□□ -0.27
CHD1-212ENST00000614616 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.36□□□□□ -0.27
CHD1-212ENST00000614616 MEN1O00255 615 aa13.36□□□□□ -0.27
CHD1-212ENST00000614616 NDST3O95803 873 aa13.36□□□□□ -0.27
CHD1-212ENST00000614616 PRKCHP24723 683 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms