RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 FAM13CQ8NE31 585 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 RP9Q8TA86 221 aaKnown RBP13.18□□□□□ -0.3
TMEM254-213ENST00000613758 ZDHHC12Q96GR4 267 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 SARGQ9BW04 601 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 LRTM1Q9HBL6 345 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 DMRT3Q9NQL9 472 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 FAM86C1Q9NVL1 165 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 VPS29Q9UBQ0 182 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 EPHA6Q9UF33 1036 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 GOLGA4Q13439 2230 aaKnown RBP13.18□□□□□ -0.3
TMEM254-213ENST00000613758 DUX1O43812 170 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 SH3BGRLO75368 114 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 SEC22BO75396 215 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 RSL1D1O76021 490 aaKnown RBP13.18□□□□□ -0.3
TMEM254-213ENST00000613758 TGFB1P01137 390 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 THRAP10827 490 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 CKMT1AP12532 417 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 HOXB3P14651 431 aaPredicted RBP13.18□□□□□ -0.3
TMEM254-213ENST00000613758 CD1CP29017 333 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 SERPINB1P30740 379 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 GRK6P43250 576 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 ATP4BP51164 291 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 CYP4F2P78329 520 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 SLC25A3Q00325 362 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 PROX2Q3B8N5 592 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 PERM1Q5SV97 790 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 OGFOD2Q6N063 350 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 FBXO42Q6P3S6 717 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 FAM92BQ6ZTR7 304 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 SPATA19Q7Z5L4 167 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 SPRED1Q7Z699 444 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 FNDC5Q8NAU1 212 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 MFSD9Q8NBP5 474 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 TTLQ8NG68 377 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 BAHD1Q8TBE0 780 aaPredicted RBP13.18□□□□□ -0.3
TMEM254-213ENST00000613758 NAT6Q93015 286 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 CMTM7Q96FZ5 175 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 TGM7Q96PF1 710 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 MAP3K3Q99759 626 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 RTKNQ9BST9 563 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 SEMA4GQ9NTN9 838 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 C1orf109Q9NX04 203 aa13.18□□□□□ -0.3
TMEM254-213ENST00000613758 SLC9B1P1A6NJY1 282 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 CDX4O14627 284 aaPredicted RBP13.17□□□□□ -0.3
TMEM254-213ENST00000613758 KIF1CO43896 1103 aaKnown RBP13.17□□□□□ -0.3
TMEM254-213ENST00000613758 PRAMEF10O60809 474 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 ETHE1O95571 254 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 LMNAP02545 664 aaKnown RBP13.17□□□□□ -0.3
TMEM254-213ENST00000613758 ST6GAL1P15907 406 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 ITGAXP20702 1163 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 PRPH2P23942 346 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 PTX3P26022 381 aaPredicted RBP13.17□□□□□ -0.3
TMEM254-213ENST00000613758 AHRP35869 848 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 DUSP3P51452 185 aaPredicted RBP13.17□□□□□ -0.3
TMEM254-213ENST00000613758 MNAT1P51948 309 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 GFERP55789 205 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 ERVK-8P63133 956 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 DAB2P98082 770 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 EMX2Q04743 252 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 ZIC1Q15915 447 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 INAVAQ3KP66 663 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 RFTN2Q52LD8 501 aaPredicted RBP13.17□□□□□ -0.3
TMEM254-213ENST00000613758 USP53Q70EK8 1073 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 ZFAND4Q86XD8 727 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 TRAPPC9Q96Q05 1148 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 ZMYND15Q9H091 742 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 C1GALT1Q9NS00 363 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 NMRK1Q9NWW6 199 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 NCDNQ9UBB6 729 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 AP1M2Q9Y6Q5 423 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 HEATR5BQ9P2D3 2071 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 NPIPB8E9PQR5 432 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 CTSVO60911 334 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 EZRP15311 586 aaKnown RBP13.17□□□□□ -0.3
TMEM254-213ENST00000613758 NBL1P41271 181 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 RPS15AP62244 130 aaKnown RBP13.17□□□□□ -0.3
TMEM254-213ENST00000613758 CFHR1Q03591 330 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 RELAQ04206 551 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 CYP4F3Q08477 520 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 SMU1Q2TAY7 513 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 PRR23CQ6ZRP0 262 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 GK5Q6ZS86 529 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 PLXDC1Q8IUK5 500 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 SERPINI1Q99574 410 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 C1orf50Q9BV19 199 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 OR51B5Q9H339 312 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 RXFP3Q9NSD7 469 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 PILRAQ9UKJ1 303 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 PPT2Q9UMR5 302 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 PCDHGA4Q9Y5G9 962 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 DNAH14Q0VDD8 3507 aa13.17□□□□□ -0.3
TMEM254-213ENST00000613758 SNRNP200O75643 2136 aaKnown RBP13.17□□□□□ -0.3
TMEM254-213ENST00000613758 RALGAPA1Q6GYQ0 2036 aa13.16□□□□□ -0.3
TMEM254-213ENST00000613758 FLRT2O43155 660 aa13.16□□□□□ -0.3
TMEM254-213ENST00000613758 CLEC3AO75596 197 aa13.16□□□□□ -0.3
TMEM254-213ENST00000613758 SERPIND1P05546 499 aa13.16□□□□□ -0.3
TMEM254-213ENST00000613758 GPX3P22352 226 aa13.16□□□□□ -0.3
TMEM254-213ENST00000613758 GSTM2P28161 218 aa13.16□□□□□ -0.3
TMEM254-213ENST00000613758 PGM1P36871 562 aa13.16□□□□□ -0.3
TMEM254-213ENST00000613758 RPL38P63173 70 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms