RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 GRK4P32298 578 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 PRAMEF17Q5VTA0 474 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 SLC30A6Q6NXT4 461 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 RAB42Q8N4Z0 105 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 MRPL45Q9BRJ2 306 aaKnown RBP4.81□□□□□ -1.64
VPS13D-213ENST00000613099 ACOXLQ9NUZ1 547 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 CSNK1G3Q9Y6M4 447 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 PTPRJQ12913 1337 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 DLEC1Q9Y238 1755 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 F5H6K3 240 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 LILRB5O75023 590 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 PPP3CBP16298 524 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 KLRC2P26717 231 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 RPL3P39023 403 aaKnown RBP4.81□□□□□ -1.64
VPS13D-213ENST00000613099 ALDH3B1P43353 468 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 LUMP51884 338 aaPredicted RBP4.81□□□□□ -1.64
VPS13D-213ENST00000613099 DDX53Q86TM3 631 aaKnown RBP4.81□□□□□ -1.64
VPS13D-213ENST00000613099 FAM83FQ8NEG4 500 aaPredicted RBP4.81□□□□□ -1.64
VPS13D-213ENST00000613099 OR6B3Q8NGW1 331 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 NT5C1AQ9BXI3 368 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 OR51M1Q9H341 326 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 MIOXQ9UGB7 285 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 A0A0G2JLW4 131 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 A6NL46 340 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 HSBP1L1C9JCN9 74 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 IL3P08700 152 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 SFTPCP11686 197 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 GLP1RP43220 463 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 TLE4Q04727 773 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 AFMIDQ63HM1 303 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 ARHGAP11AQ6P4F7 1023 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 GAREM2Q75VX8 874 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 NAA40Q86UY6 237 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 PHF13Q86YI8 300 aaPredicted RBP4.81□□□□□ -1.64
VPS13D-213ENST00000613099 TMEM192Q8IY95 271 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 OR56B4Q8NH76 319 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 COPS5Q92905 334 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 CHFRQ96EP1 664 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 ZNF778Q96MU6 729 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 ATG5Q9H1Y0 275 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 SEC14L3Q9UDX4 400 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 A0A1W2PP18 115 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 SLC31A2O15432 143 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 MAGEB4O15481 346 aaPredicted RBP4.81□□□□□ -1.64
VPS13D-213ENST00000613099 TLR5O60602 858 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 CYP2A6P11509 494 aaPredicted RBP4.81□□□□□ -1.64
VPS13D-213ENST00000613099 DSG3P32926 999 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 PKIAP61925 76 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 TAP2Q03519 686 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 PDZK1IP1Q13113 114 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 NHSL2Q5HYW2 709 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 OR10K2Q6IF99 312 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 FAM220AQ7Z4H9 259 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 SAMD12Q8N8I0 201 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 TANKQ92844 425 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 PARK7Q99497 189 aaKnown RBP4.81□□□□□ -1.64
VPS13D-213ENST00000613099 ASF1BQ9NVP2 202 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 PXDNQ92626 1479 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 KDM4FA0A1W2PPD8 638 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 LEUTXA8MZ59 168 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 GKP32189 559 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 ZNF460Q14592 562 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 HYIQ5T013 277 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 DNAJC22Q8N4W6 341 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 OR52L1Q8NGH7 329 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 FCAMRQ8WWV6 532 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 CBWD1Q9BRT8 395 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 TBC1D17Q9HA65 648 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 ZNFX1Q9P2E3 1918 aaKnown RBP4.81□□□□□ -1.64
VPS13D-213ENST00000613099 SEC14L5O43304 696 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 SCO2O43819 266 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 ZBTB14O43829 449 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 KIAA1024LP59773 190 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 MXD1Q05195 221 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 MAP4K2Q12851 820 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 PLEKHN1Q494U1 663 aaPredicted RBP4.81□□□□□ -1.64
VPS13D-213ENST00000613099 GTF2IRD2BQ6EKJ0 949 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 SCARA5Q6ZMJ2 495 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 HIST2H3AQ71DI3 136 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 GTF2IRD2Q86UP8 949 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 ENTHD1Q8IYW4 607 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 KCNJ9Q92806 393 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 AHSPQ9NZD4 102 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 FBXO5Q9UKT4 447 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 SPIN1Q9Y657 262 aaPredicted RBP4.81□□□□□ -1.64
VPS13D-213ENST00000613099 RPN2P04844 631 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 IDUAP35475 653 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 E2F1Q01094 437 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 PDSS1Q5T2R2 415 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 GPR153Q6NV75 609 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 CHST15Q7LFX5 561 aaPredicted RBP4.81□□□□□ -1.64
VPS13D-213ENST00000613099 TMEM200AQ86VY9 491 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 PXT1Q8NFP0 134 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 SCARB1Q8WTV0 552 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 FAM84BQ96KN1 310 aaPredicted RBP4.81□□□□□ -1.64
VPS13D-213ENST00000613099 DPEP2Q9H4A9 486 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 MYNNQ9NPC7 610 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 FABP7O15540 132 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 CKMT1AP12532 417 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 RFC2P35250 354 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms