RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 ADNP2Q6IQ32 1131 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 PRR23BQ6ZRT6 265 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 AMIGO1Q86WK6 493 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 DPP10Q8N608 796 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 DEFB119Q8N690 84 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 STMN2Q93045 179 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 PRAP1Q96NZ9 151 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 SPNS1Q9H2V7 528 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 TCEAL2Q9H3H9 227 aaPredicted RBP8.56□□□□□ -1.04
CCDC47-207ENST00000612558 DCLRE1BQ9H816 532 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 SIRT5Q9NXA8 310 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 TAAR2Q9P1P5 351 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 TMEM181Q9P2C4 612 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 KLF15Q9UIH9 416 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 INVSQ9Y283 1065 aa8.56□□□□□ -1.04
CCDC47-207ENST00000612558 TDRD6O60522 2096 aaKnown RBP8.56□□□□□ -1.04
CCDC47-207ENST00000612558 CACNA1IQ9P0X4 2223 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 CROCCQ5TZA2 2017 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 PLXND1Q9Y4D7 1925 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 TRBV23OR9-2A0A075B6M9 112 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 KIR2DS5A0A0G2JLQ3 304 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 A0A0G2JNG1 304 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 A0A1W2PR77 199 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 ANKDD1BA6NHY2 528 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 KIR2DS3K7RE56 304 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 TRIM38O00635 465 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 SORBS2O94875 1100 aaKnown RBP8.55□□□□□ -1.04
CCDC47-207ENST00000612558 CCNDBP1O95273 360 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 TGFB1P01137 390 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 PGRP06401 933 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 PRPS1L1P21108 318 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 TACR1P25103 407 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 DGKQP52824 942 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 KIR2DS5Q14953 304 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 FAM174BQ3ZCQ3 159 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 SPATS1Q496A3 300 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 ZNF542PQ5EBM4 170 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 SAMD4BQ5PRF9 694 aaKnown RBP8.55□□□□□ -1.04
CCDC47-207ENST00000612558 GALNT18Q6P9A2 607 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 TAF8Q7Z7C8 310 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 SYT12Q8IV01 421 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 TRIM48Q8IWZ4 208 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 KRTCAP2Q8N6L1 136 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 C1orf52Q8N6N3 182 aaKnown RBP8.55□□□□□ -1.04
CCDC47-207ENST00000612558 KDF1Q8NAX2 398 aaPredicted RBP8.55□□□□□ -1.04
CCDC47-207ENST00000612558 ZNF740Q8NDX6 193 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 OR4E2Q8NGC2 313 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 CLHC1Q8NHS4 586 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 SLC13A3Q8WWT9 602 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 SLC22A18Q96BI1 424 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 TESCQ96BS2 214 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 CCDC124Q96CT7 223 aaKnown RBP8.55□□□□□ -1.04
CCDC47-207ENST00000612558 TMEM74Q96NL1 305 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 TSSK3Q96PN8 268 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 RNPEPL1Q9HAU8 725 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 IL1RL2Q9HB29 575 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 MRPS30Q9NP92 439 aaKnown RBP8.55□□□□□ -1.04
CCDC47-207ENST00000612558 TMEM184CQ9NVA4 438 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 BCAP29Q9UHQ4 241 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 MAPRE3Q9UPY8 281 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 SLCO1B1Q9Y6L6 691 aa8.55□□□□□ -1.04
CCDC47-207ENST00000612558 CEP192Q8TEP8 1941 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 FXYD1O00168 92 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 TLR4O00206 839 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 MEN1O00255 615 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 SH3BGRLO75368 114 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 VIPP01282 170 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 CSF2P04141 144 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 WNT1P04628 370 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 CHRM5P08912 532 aaPredicted RBP8.54□□□□□ -1.04
CCDC47-207ENST00000612558 ANXA4P09525 319 aaPredicted RBP8.54□□□□□ -1.04
CCDC47-207ENST00000612558 SLC6A2P23975 617 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 MAOBP27338 520 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 CMPK1P30085 196 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 HOXA6P31267 233 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 TIA1P31483 386 aaKnown RBP eCLIP8.54□□□□□ -1.04
CCDC47-207ENST00000612558 GRK3P35626 688 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 ASMTP46597 345 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 SLC7A2P52569 658 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 C21orf58P58505 322 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 CSNK1G2P78368 415 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 RAE1P78406 368 aaKnown RBP8.54□□□□□ -1.04
CCDC47-207ENST00000612558 ZXDAP98168 799 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 KIR2DS3Q14952 304 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 SF1Q15637 639 aaKnown RBP8.54□□□□□ -1.04
CCDC47-207ENST00000612558 MAPKAPK3Q16644 382 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 DPY19L1Q2PZI1 675 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 SPANXN4Q5MJ08 99 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 SLC2A7Q6PXP3 512 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 VN1R5Q7Z5H4 357 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 DHDDSQ86SQ9 333 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 RIMKLAQ8IXN7 391 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 SLC15A3Q8IY34 581 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.54□□□□□ -1.045e-6■■■■■ 55.7
CCDC47-207ENST00000612558 METTL4Q8N3J2 472 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 ENDOVQ8N8Q3 282 aaKnown RBP8.54□□□□□ -1.04
CCDC47-207ENST00000612558 GPR156Q8NFN8 814 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 TTLQ8NG68 377 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 OR2L3Q8NG85 312 aa8.54□□□□□ -1.04
CCDC47-207ENST00000612558 DNAJB8Q8NHS0 232 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms