RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 THAP11Q96EK4 314 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 DTD2Q96FN9 168 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 IL1RAPQ9NPH3 570 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 TBC1D14Q9P2M4 693 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 C3orf18Q9UK00 162 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 MYO15AQ9UKN7 3530 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 TSPAN11A1L157 253 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 TMEM229AB2RXF0 380 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 H0YIV9 168 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 J3QRK9 145 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 KIAA0355O15063 1070 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 LILRB5O75023 590 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 KLHL18O94889 574 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 C6orf47O95873 294 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 FABP3P05413 133 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 WASP42768 502 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 CRATP43155 626 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 MAGEA2P43356 314 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 DGKEP52429 567 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 CYP4F2P78329 520 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 SRSF11Q05519 484 aaKnown RBP13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 CDK5R2Q13319 367 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 NEK10Q6ZWH5 1172 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 PIWIL3Q7Z3Z3 882 aaKnown RBP13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 CCDC71Q8IV32 467 aaPredicted RBP13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 MMAAQ8IVH4 418 aaKnown RBP13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 OR8J2Q8NGG1 315 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 ABTB1Q969K4 478 aaPredicted RBP13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 MAGIXQ9H6Y5 334 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 RHBDL2Q9NX52 303 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 SAMD4AQ9UPU9 718 aaKnown RBP13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 PCDHB11Q9Y5F2 797 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 RTCAO00442 366 aaKnown RBP13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 SCAMP1O15126 338 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 HTR1BP28222 390 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 HOXA9P31269 272 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 TRPC1P48995 793 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 ST8SIA6P61647 398 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 NFATC3Q12968 1075 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 SHQ1Q6PI26 577 aaKnown RBP13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 CCDC81Q6ZN84 652 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 GPR155Q7Z3F1 870 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 COMMD6Q7Z4G1 85 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 TSEN54Q7Z6J9 526 aaKnown RBP13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 B3GNT8Q7Z7M8 397 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 HORMAD1Q86X24 394 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 OR52E4Q8NGH9 312 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 OR5AR1Q8NGP9 310 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 TBC1D15Q8TC07 691 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 CHTF18Q8WVB6 975 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 HDAC2Q92769 488 aaKnown RBP13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 COQ10AQ96MF6 247 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 C5AR2Q9P296 337 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 FAF1Q9UNN5 650 aaPredicted RBP13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 TDRKHQ9Y2W6 561 aaKnown RBP13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 TESMINQ9Y4I5 508 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 IRAK3Q9Y616 596 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 KCNE2Q9Y6J6 123 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 PRUNE2Q8WUY3 3088 aa13.55□□□□□ -0.24
PCDHGA3-202ENST00000612467 C1orf226A1L170 272 aa13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 LZTS3O60299 673 aaPredicted RBP13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 POP7O75817 140 aaKnown RBP13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 SEC14L2O76054 403 aa13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 STATHP02808 62 aa13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 DMC1Q14565 340 aa13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 SPCS2Q15005 226 aa13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 C9orf64Q5T6V5 341 aa13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 GTF2IRD2BQ6EKJ0 949 aa13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 GTF2IRD2Q86UP8 949 aa13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 NPAS3Q8IXF0 933 aa13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 PIK3C3Q8NEB9 887 aa13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 ABCG4Q9H172 646 aa13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 SLC23A2Q9UGH3 650 aa13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 PIPSLA2A3N6 862 aa13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 HEPACAM2A8MVW5 462 aa13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 M0R129 80 aa13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 LATO43561 262 aa13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 MYO1DO94832 1006 aa13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 KLK1P06870 262 aa13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 TIA1P31483 386 aaKnown RBP eCLIP13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 HNF4AP41235 474 aa13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 GP2P55259 537 aaKnown RBP13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 SH3BGRP55822 239 aaPredicted RBP13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 TAP2Q03519 686 aa13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 RGNQ15493 299 aa13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 ZNF658BQ4V348 819 aaPredicted RBP13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 FAM109BQ6ICB4 259 aaPredicted RBP13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 DUS1LQ6P1R4 473 aaKnown RBP13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 MED27Q6P2C8 311 aa13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 HIPK1Q86Z02 1210 aa13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 SYNPOQ8N3V7 929 aa13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 ATG16L2Q8NAA4 619 aa13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 ZFP90Q8TF47 636 aa13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 TIFAQ96CG3 184 aa13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 NUS1Q96E22 293 aa13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 FOPNLQ96NB1 174 aa13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 VPS35Q96QK1 796 aa13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 DOK1Q99704 481 aa13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 FUNDC2Q9BWH2 189 aa13.54□□□□□ -0.24
PCDHGA3-202ENST00000612467 AMBNQ9NP70 447 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms