RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 IL10P22301 178 aa17.24■□□□□ 0.35
VCX3A-203ENST00000612369 SKP1P63208 163 aa17.24■□□□□ 0.35
VCX3A-203ENST00000612369 MAT1AQ00266 395 aaKnown RBP17.24■□□□□ 0.35
VCX3A-203ENST00000612369 HERC3Q15034 1050 aa17.24■□□□□ 0.35
VCX3A-203ENST00000612369 RIPOR1Q6ZS17 1223 aa17.24■□□□□ 0.35
VCX3A-203ENST00000612369 CAPN12Q6ZSI9 719 aa17.24■□□□□ 0.35
VCX3A-203ENST00000612369 C3orf62Q6ZUJ4 267 aa17.24■□□□□ 0.35
VCX3A-203ENST00000612369 ZNF572Q7Z3I7 529 aaPredicted RBP17.24■□□□□ 0.35
VCX3A-203ENST00000612369 KCT2Q8NC54 265 aa17.24■□□□□ 0.35
VCX3A-203ENST00000612369 OR51Q1Q8NH59 317 aa17.24■□□□□ 0.35
VCX3A-203ENST00000612369 METTL21AQ8WXB1 218 aa17.24■□□□□ 0.35
VCX3A-203ENST00000612369 NEIL2Q969S2 332 aa17.24■□□□□ 0.35
VCX3A-203ENST00000612369 SNRNP40Q96DI7 357 aaKnown RBP17.24■□□□□ 0.35
VCX3A-203ENST00000612369 ZNF700Q9H0M5 742 aa17.24■□□□□ 0.35
VCX3A-203ENST00000612369 PELI2Q9HAT8 420 aa17.24■□□□□ 0.35
VCX3A-203ENST00000612369 CTNNAL1Q9UBT7 734 aa17.24■□□□□ 0.35
VCX3A-203ENST00000612369 IKZF3Q9UKT9 509 aa17.24■□□□□ 0.35
VCX3A-203ENST00000612369 DYRK1BQ9Y463 629 aa17.24■□□□□ 0.35
VCX3A-203ENST00000612369 KCNE2Q9Y6J6 123 aa17.24■□□□□ 0.35
VCX3A-203ENST00000612369 SHANK1Q9Y566 2161 aa17.23■□□□□ 0.35
VCX3A-203ENST00000612369 TCRBV9S1A1TA0A576 114 aa17.23■□□□□ 0.35
VCX3A-203ENST00000612369 STATHP02808 62 aa17.23■□□□□ 0.35
VCX3A-203ENST00000612369 C8orf89P0DMQ9 161 aa17.23■□□□□ 0.35
VCX3A-203ENST00000612369 IL1RNP18510 177 aa17.23■□□□□ 0.35
VCX3A-203ENST00000612369 AHRP35869 848 aa17.23■□□□□ 0.35
VCX3A-203ENST00000612369 PLTPP55058 493 aa17.23■□□□□ 0.35
VCX3A-203ENST00000612369 MFAP5Q13361 173 aa17.23■□□□□ 0.35
VCX3A-203ENST00000612369 ZNF460Q14592 562 aa17.23■□□□□ 0.35
VCX3A-203ENST00000612369 CRB2Q5IJ48 1285 aa17.23■□□□□ 0.35
VCX3A-203ENST00000612369 FRA10AC1Q70Z53 315 aa17.23■□□□□ 0.35
VCX3A-203ENST00000612369 THOC6Q86W42 341 aaKnown RBP17.23■□□□□ 0.35
VCX3A-203ENST00000612369 CEP97Q8IW35 865 aa17.23■□□□□ 0.35
VCX3A-203ENST00000612369 ANKRD49Q8WVL7 239 aa17.23■□□□□ 0.35
VCX3A-203ENST00000612369 EGFL8Q99944 293 aa17.23■□□□□ 0.35
VCX3A-203ENST00000612369 MACROD1Q9BQ69 325 aa17.23■□□□□ 0.35
VCX3A-203ENST00000612369 MESP1Q9BRJ9 268 aa17.23■□□□□ 0.35
VCX3A-203ENST00000612369 TUBB6Q9BUF5 446 aa17.23■□□□□ 0.35
VCX3A-203ENST00000612369 DERL2Q9GZP9 239 aa17.23■□□□□ 0.35
VCX3A-203ENST00000612369 MAP10Q9P2G4 905 aa17.23■□□□□ 0.35
VCX3A-203ENST00000612369 C19orf25Q9UFG5 118 aaPredicted RBP17.23■□□□□ 0.35
VCX3A-203ENST00000612369 ZFP69BQ9UJL9 534 aa17.23■□□□□ 0.35
VCX3A-203ENST00000612369 MTO1Q9Y2Z2 717 aaKnown RBP17.23■□□□□ 0.35
VCX3A-203ENST00000612369 LRRK2Q5S007 2527 aa17.23■□□□□ 0.35
VCX3A-203ENST00000612369 PTPN13Q12923 2485 aa17.23■□□□□ 0.35
VCX3A-203ENST00000612369 HECTD1Q9ULT8 2610 aa17.22■□□□□ 0.35
VCX3A-203ENST00000612369 NPEPPSL1A6NEC2 478 aa17.22■□□□□ 0.35
VCX3A-203ENST00000612369 FAM159BA6NKW6 160 aa17.22■□□□□ 0.35
VCX3A-203ENST00000612369 NDUFS4O43181 175 aa17.22■□□□□ 0.35
VCX3A-203ENST00000612369 PRR35P0CG20 571 aa17.22■□□□□ 0.35
VCX3A-203ENST00000612369 GNLYP22749 145 aa17.22■□□□□ 0.35
VCX3A-203ENST00000612369 GP5P40197 560 aa17.22■□□□□ 0.35
VCX3A-203ENST00000612369 XCR1P46094 333 aa17.22■□□□□ 0.35
VCX3A-203ENST00000612369 SCTRP47872 440 aa17.22■□□□□ 0.35
VCX3A-203ENST00000612369 SNRPNP63162 240 aaKnown RBP17.22■□□□□ 0.35
VCX3A-203ENST00000612369 EEF1A2Q05639 463 aaKnown RBP17.22■□□□□ 0.35
VCX3A-203ENST00000612369 RGS1Q08116 209 aa17.22■□□□□ 0.35
VCX3A-203ENST00000612369 PRR30Q53SZ7 412 aaPredicted RBP17.22■□□□□ 0.35
VCX3A-203ENST00000612369 CATSPEREQ5SY80 951 aa17.22■□□□□ 0.35
VCX3A-203ENST00000612369 B3GNTL1Q67FW5 361 aaPredicted RBP17.22■□□□□ 0.35
VCX3A-203ENST00000612369 FAAH2Q6GMR7 532 aa17.22■□□□□ 0.35
VCX3A-203ENST00000612369 PRSS41Q7RTY9 318 aa17.22■□□□□ 0.35
VCX3A-203ENST00000612369 CUZD1Q86UP6 607 aa17.22■□□□□ 0.35
VCX3A-203ENST00000612369 KLHDC8AQ8IYD2 350 aa17.22■□□□□ 0.35
VCX3A-203ENST00000612369 C17orf53Q8N3J3 647 aaPredicted RBP17.22■□□□□ 0.35
VCX3A-203ENST00000612369 AFAP1L2Q8N4X5 818 aa17.22■□□□□ 0.35
VCX3A-203ENST00000612369 ZCCHC10Q8TBK6 192 aa17.22■□□□□ 0.35
VCX3A-203ENST00000612369 DNAJB14Q8TBM8 379 aa17.22■□□□□ 0.35
VCX3A-203ENST00000612369 NT5CQ8TCD5 201 aa17.22■□□□□ 0.35
VCX3A-203ENST00000612369 CYTH2Q99418 400 aa17.22■□□□□ 0.35
VCX3A-203ENST00000612369 GPR22Q99680 433 aa17.22■□□□□ 0.35
VCX3A-203ENST00000612369 RBBP8Q99708 897 aa17.22■□□□□ 0.35
VCX3A-203ENST00000612369 AIF1LQ9BQI0 150 aa17.22■□□□□ 0.35
VCX3A-203ENST00000612369 VN1R1Q9GZP7 353 aa17.22■□□□□ 0.35
VCX3A-203ENST00000612369 CLK4Q9HAZ1 481 aaKnown RBP17.22■□□□□ 0.35
VCX3A-203ENST00000612369 SLC22A14Q9Y267 594 aa17.22■□□□□ 0.35
VCX3A-203ENST00000612369 PCDHGA10Q9Y5H3 936 aa17.22■□□□□ 0.35
VCX3A-203ENST00000612369 COPG1Q9Y678 874 aaKnown RBP17.22■□□□□ 0.35
VCX3A-203ENST00000612369 COL12A1Q99715 3063 aa17.22■□□□□ 0.35
VCX3A-203ENST00000612369 URADA6NGE7 173 aa17.21■□□□□ 0.35
VCX3A-203ENST00000612369 CXorf49A8MYA2 514 aaPredicted RBP17.21■□□□□ 0.35
VCX3A-203ENST00000612369 TCP11X1B4DZS4 312 aa17.21■□□□□ 0.35
VCX3A-203ENST00000612369 SGK494L7N484 410 aa17.21■□□□□ 0.35
VCX3A-203ENST00000612369 KLHL18O94889 574 aa17.21■□□□□ 0.35
VCX3A-203ENST00000612369 WISP3O95389 354 aaPredicted RBP17.21■□□□□ 0.35
VCX3A-203ENST00000612369 ALOX12P18054 663 aa17.21■□□□□ 0.35
VCX3A-203ENST00000612369 UQCRFS1P47985 274 aa17.21■□□□□ 0.35
VCX3A-203ENST00000612369 GLRBP48167 497 aa17.21■□□□□ 0.35
VCX3A-203ENST00000612369 AGTR2P50052 363 aa17.21■□□□□ 0.35
VCX3A-203ENST00000612369 MEF2AQ02078 507 aaPredicted RBP17.21■□□□□ 0.35
VCX3A-203ENST00000612369 CKAP4Q07065 602 aaKnown RBP17.21■□□□□ 0.35
VCX3A-203ENST00000612369 SRSF1Q07955 248 aaKnown RBP eCLIP17.21■□□□□ 0.35
VCX3A-203ENST00000612369 USP10Q14694 798 aaKnown RBP17.21■□□□□ 0.35
VCX3A-203ENST00000612369 PCOLCEQ15113 449 aa17.21■□□□□ 0.35
VCX3A-203ENST00000612369 TLR1Q15399 786 aa17.21■□□□□ 0.35
VCX3A-203ENST00000612369 TSNQ15631 228 aaKnown RBP17.21■□□□□ 0.35
VCX3A-203ENST00000612369 MINDY4Q4G0A6 757 aa17.21■□□□□ 0.35
VCX3A-203ENST00000612369 CDKL4Q5MAI5 379 aa17.21■□□□□ 0.35
VCX3A-203ENST00000612369 FHL5Q5TD97 284 aa17.21■□□□□ 0.35
VCX3A-203ENST00000612369 NXPE4Q6UWF7 544 aa17.21■□□□□ 0.35
VCX3A-203ENST00000612369 PDSS2Q86YH6 399 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms