RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 PEX11GQ96HA9 241 aa12.6□□□□□ -0.39
HMGB1P24-201ENST00000611897 ZNF354BQ96LW1 612 aa12.6□□□□□ -0.39
HMGB1P24-201ENST00000611897 UTP23Q9BRU9 249 aaKnown RBP12.6□□□□□ -0.39
HMGB1P24-201ENST00000611897 ATG10Q9H0Y0 220 aa12.6□□□□□ -0.39
HMGB1P24-201ENST00000611897 CHST11Q9NPF2 352 aa12.6□□□□□ -0.39
HMGB1P24-201ENST00000611897 C20orf96Q9NUD7 363 aaPredicted RBP12.6□□□□□ -0.39
HMGB1P24-201ENST00000611897 TMEM184CQ9NVA4 438 aa12.6□□□□□ -0.39
HMGB1P24-201ENST00000611897 NCOA6Q14686 2063 aaPredicted RBP12.6□□□□□ -0.39
HMGB1P24-201ENST00000611897 GABRR3A8MPY1 467 aa12.59□□□□□ -0.39
HMGB1P24-201ENST00000611897 H0YIG0 161 aa12.59□□□□□ -0.39
HMGB1P24-201ENST00000611897 MAN1A2O60476 641 aa12.59□□□□□ -0.39
HMGB1P24-201ENST00000611897 KRT14P02533 472 aa12.59□□□□□ -0.39
HMGB1P24-201ENST00000611897 SERPIND1P05546 499 aa12.59□□□□□ -0.39
HMGB1P24-201ENST00000611897 CDH1P12830 882 aa12.59□□□□□ -0.39
HMGB1P24-201ENST00000611897 ABOP16442 354 aa12.59□□□□□ -0.39
HMGB1P24-201ENST00000611897 BCL6P41182 706 aa12.59□□□□□ -0.39
HMGB1P24-201ENST00000611897 AGTR2P50052 363 aa12.59□□□□□ -0.39
HMGB1P24-201ENST00000611897 SMSP52788 366 aa12.59□□□□□ -0.39
HMGB1P24-201ENST00000611897 CSNK1G2P78368 415 aa12.59□□□□□ -0.39
HMGB1P24-201ENST00000611897 HSF1Q00613 529 aa12.59□□□□□ -0.39
HMGB1P24-201ENST00000611897 PTK6Q13882 451 aa12.59□□□□□ -0.39
HMGB1P24-201ENST00000611897 NSDHLQ15738 373 aa12.59□□□□□ -0.39
HMGB1P24-201ENST00000611897 ZNF630Q2M218 657 aaPredicted RBP12.59□□□□□ -0.39
HMGB1P24-201ENST00000611897 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.59□□□□□ -0.39
HMGB1P24-201ENST00000611897 C3P1Q6ZMU1 363 aa12.59□□□□□ -0.39
HMGB1P24-201ENST00000611897 GALNTL5Q7Z4T8 443 aa12.59□□□□□ -0.39
HMGB1P24-201ENST00000611897 ASPGQ86U10 573 aa12.59□□□□□ -0.39
HMGB1P24-201ENST00000611897 C17orf64Q86WR6 236 aa12.59□□□□□ -0.39
HMGB1P24-201ENST00000611897 CYP4X1Q8N118 509 aa12.59□□□□□ -0.39
HMGB1P24-201ENST00000611897 CAMKVQ8NCB2 501 aa12.59□□□□□ -0.39
HMGB1P24-201ENST00000611897 KCNJ9Q92806 393 aa12.59□□□□□ -0.39
HMGB1P24-201ENST00000611897 LURAP1Q96LR2 239 aa12.59□□□□□ -0.39
HMGB1P24-201ENST00000611897 CCDC138Q96M89 665 aa12.59□□□□□ -0.39
HMGB1P24-201ENST00000611897 NDNQ99608 321 aa12.59□□□□□ -0.39
HMGB1P24-201ENST00000611897 TRMT6Q9UJA5 497 aaKnown RBP12.59□□□□□ -0.39
HMGB1P24-201ENST00000611897 MED16Q9Y2X0 877 aa12.59□□□□□ -0.39
HMGB1P24-201ENST00000611897 DHRS7Q9Y394 339 aa12.59□□□□□ -0.39
HMGB1P24-201ENST00000611897 CSMD2Q7Z408 3487 aa12.59□□□□□ -0.39
HMGB1P24-201ENST00000611897 PDZD2O15018 2839 aa12.59□□□□□ -0.39
HMGB1P24-201ENST00000611897 MLYCDO95822 493 aa12.58□□□□□ -0.4
HMGB1P24-201ENST00000611897 SLC35G6P0C7Q6 338 aa12.58□□□□□ -0.4
HMGB1P24-201ENST00000611897 CD46P15529 392 aa12.58□□□□□ -0.4
HMGB1P24-201ENST00000611897 PTGER4P35408 488 aa12.58□□□□□ -0.4
HMGB1P24-201ENST00000611897 CD96P40200 585 aa12.58□□□□□ -0.4
HMGB1P24-201ENST00000611897 OR4D2P58180 307 aa12.58□□□□□ -0.4
HMGB1P24-201ENST00000611897 TAS2R50P59544 299 aa12.58□□□□□ -0.4
HMGB1P24-201ENST00000611897 OLR1P78380 273 aa12.58□□□□□ -0.4
HMGB1P24-201ENST00000611897 MEF2AQ02078 507 aaPredicted RBP12.58□□□□□ -0.4
HMGB1P24-201ENST00000611897 NAE1Q13564 534 aa12.58□□□□□ -0.4
HMGB1P24-201ENST00000611897 EXT1Q16394 746 aa12.58□□□□□ -0.4
HMGB1P24-201ENST00000611897 MAPKAPK3Q16644 382 aa12.58□□□□□ -0.4
HMGB1P24-201ENST00000611897 MEP1AQ16819 746 aa12.58□□□□□ -0.4
HMGB1P24-201ENST00000611897 SPINK14Q6IE38 97 aa12.58□□□□□ -0.4
HMGB1P24-201ENST00000611897 TMEM214Q6NUQ4 689 aaKnown RBP12.58□□□□□ -0.4
HMGB1P24-201ENST00000611897 XKRXQ6PP77 449 aa12.58□□□□□ -0.4
HMGB1P24-201ENST00000611897 CAND1Q86VP6 1230 aaKnown RBP12.58□□□□□ -0.4
HMGB1P24-201ENST00000611897 SLC26A11Q86WA9 606 aa12.58□□□□□ -0.4
HMGB1P24-201ENST00000611897 GAS2L3Q86XJ1 694 aa12.58□□□□□ -0.4
HMGB1P24-201ENST00000611897 PDSS2Q86YH6 399 aa12.58□□□□□ -0.4
HMGB1P24-201ENST00000611897 PALM2Q8IXS6 379 aa12.58□□□□□ -0.4
HMGB1P24-201ENST00000611897 LRRC56Q8IYG6 542 aaPredicted RBP12.58□□□□□ -0.4
HMGB1P24-201ENST00000611897 SLC5A8Q8N695 610 aa12.58□□□□□ -0.4
HMGB1P24-201ENST00000611897 TMEM178AQ8NBL3 297 aa12.58□□□□□ -0.4
HMGB1P24-201ENST00000611897 FAM98AQ8NCA5 519 aaKnown RBP12.58□□□□□ -0.4
HMGB1P24-201ENST00000611897 FBXO15Q8NCQ5 510 aaPredicted RBP12.58□□□□□ -0.4
HMGB1P24-201ENST00000611897 MDS2Q8NDY4 140 aa12.58□□□□□ -0.4
HMGB1P24-201ENST00000611897 OR5T3Q8NGG3 340 aa12.58□□□□□ -0.4
HMGB1P24-201ENST00000611897 SLC13A3Q8WWT9 602 aa12.58□□□□□ -0.4
HMGB1P24-201ENST00000611897 GPR137Q96N19 417 aa12.58□□□□□ -0.4
HMGB1P24-201ENST00000611897 LPAR4Q99677 370 aa12.58□□□□□ -0.4
HMGB1P24-201ENST00000611897 ADAMTS6Q9UKP5 1117 aa12.58□□□□□ -0.4
HMGB1P24-201ENST00000611897 ZKSCAN5Q9Y2L8 839 aa12.58□□□□□ -0.4
HMGB1P24-201ENST00000611897 NAALAD2Q9Y3Q0 740 aa12.58□□□□□ -0.4
HMGB1P24-201ENST00000611897 FAM237BA0A1B0GVD1 139 aa12.57□□□□□ -0.4
HMGB1P24-201ENST00000611897 PABPN1LA6NDY0 278 aaKnown RBP12.57□□□□□ -0.4
HMGB1P24-201ENST00000611897 SDR42E2A6NKP2 422 aa12.57□□□□□ -0.4
HMGB1P24-201ENST00000611897 C19orf84I3L1E1 186 aa12.57□□□□□ -0.4
HMGB1P24-201ENST00000611897 GFYI3L273 518 aa12.57□□□□□ -0.4
HMGB1P24-201ENST00000611897 NDC80O14777 642 aa12.57□□□□□ -0.4
HMGB1P24-201ENST00000611897 NDUFS4O43181 175 aa12.57□□□□□ -0.4
HMGB1P24-201ENST00000611897 B3GALT4O96024 378 aa12.57□□□□□ -0.4
HMGB1P24-201ENST00000611897 GRK3P35626 688 aa12.57□□□□□ -0.4
HMGB1P24-201ENST00000611897 SKIV2L2P42285 1042 aaKnown RBP12.57□□□□□ -0.4
HMGB1P24-201ENST00000611897 RELAQ04206 551 aa12.57□□□□□ -0.4
HMGB1P24-201ENST00000611897 CDSNQ15517 529 aa12.57□□□□□ -0.4
HMGB1P24-201ENST00000611897 CAPN13Q6MZZ7 669 aaPredicted RBP12.57□□□□□ -0.4
HMGB1P24-201ENST00000611897 AGTRAPQ6RW13 159 aa12.57□□□□□ -0.4
HMGB1P24-201ENST00000611897 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.57□□□□□ -0.4
HMGB1P24-201ENST00000611897 KIF2BQ8N4N8 673 aa12.57□□□□□ -0.4
HMGB1P24-201ENST00000611897 FRMD6Q96NE9 622 aa12.57□□□□□ -0.4
HMGB1P24-201ENST00000611897 NPAS2Q99743 824 aa12.57□□□□□ -0.4
HMGB1P24-201ENST00000611897 TRIM8Q9BZR9 551 aa12.57□□□□□ -0.4
HMGB1P24-201ENST00000611897 CDCP1Q9H5V8 836 aa12.57□□□□□ -0.4
HMGB1P24-201ENST00000611897 IARS2Q9NSE4 1012 aaKnown RBP12.57□□□□□ -0.4
HMGB1P24-201ENST00000611897 FBXO5Q9UKT4 447 aa12.57□□□□□ -0.4
HMGB1P24-201ENST00000611897 PDE10AQ9Y233 779 aa12.57□□□□□ -0.4
HMGB1P24-201ENST00000611897 ZCWPW2A0A1B0GU75 182 aa12.56□□□□□ -0.4
HMGB1P24-201ENST00000611897 LCMT2O60294 686 aaKnown RBP12.56□□□□□ -0.4
HMGB1P24-201ENST00000611897 B4GALT2O60909 372 aa12.56□□□□□ -0.4
HMGB1P24-201ENST00000611897 HAUS5O94927 633 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms