RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 TIGARQ9NQ88 270 aa19.7■□□□□ 0.74
SSBP3-216ENST00000610401 RPS6KA6Q9UK32 745 aa19.7■□□□□ 0.74
SSBP3-216ENST00000610401 RAB23Q9ULC3 237 aa19.7■□□□□ 0.74
SSBP3-216ENST00000610401 CHD5Q8TDI0 1954 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 GABRR3A8MPY1 467 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 M0QX08 132 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 ANXA4P09525 319 aaPredicted RBP19.69■□□□□ 0.74
SSBP3-216ENST00000610401 HLA-EP13747 358 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 MRPL19P49406 292 aaKnown RBP19.69■□□□□ 0.74
SSBP3-216ENST00000610401 DGKKQ5KSL6 1271 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 LGI4Q8N135 537 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 AMER2Q8N7J2 671 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 OR4A15Q8NGL6 344 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 DUSP26Q9BV47 211 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 CTPS2Q9NRF8 586 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 SPASTQ9UBP0 616 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 MGAT4DA6NG13 374 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 KIAA0513O60268 411 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 C9P02748 559 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 AOAHP28039 575 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 SPAM1P38567 509 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 PRIM2P49643 509 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 MMP21Q8N119 569 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 ZNF366Q8N895 744 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 UPF1Q92900 1129 aaKnown RBP eCLIP19.69■□□□□ 0.745e-9■■■□□ 15.1
SSBP3-216ENST00000610401 PDLIM5Q96HC4 596 aaKnown RBP19.69■□□□□ 0.74
SSBP3-216ENST00000610401 NECTIN4Q96NY8 510 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 PKP4Q99569 1192 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 NEK6Q9HC98 313 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 MYOFQ9NZM1 2061 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 PDZK1P1A8MUH7 402 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 SH3BP5O60239 455 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 KRT8P05787 483 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 CYBAP13498 195 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 JUNDP17535 347 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 CYP4F8P98187 520 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 PPIGQ13427 754 aaKnown RBP eCLIP19.69■□□□□ 0.744e-9■■□□□ 14.2
SSBP3-216ENST00000610401 SPANXN2Q5MJ10 180 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 LRIF1Q5T3J3 769 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 DEPDC1Q5TB30 811 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 CST9Q5W186 159 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 CELF5Q8N6W0 485 aaKnown RBP19.69■□□□□ 0.74
SSBP3-216ENST00000610401 WDR36Q8NI36 951 aaKnown RBP19.69■□□□□ 0.74
SSBP3-216ENST00000610401 NFKBIDQ8NI38 313 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 TTYH2Q9BSA4 534 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 MTG2Q9H4K7 406 aa19.69■□□□□ 0.74
SSBP3-216ENST00000610401 GRXCR2A6NFK2 248 aa19.68■□□□□ 0.74
SSBP3-216ENST00000610401 OR6C75A6NL08 312 aa19.68■□□□□ 0.74
SSBP3-216ENST00000610401 PRRG1O14668 218 aa19.68■□□□□ 0.74
SSBP3-216ENST00000610401 ADORA3P0DMS8 318 aa19.68■□□□□ 0.74
SSBP3-216ENST00000610401 PIK3CBP42338 1070 aa19.68■□□□□ 0.74
SSBP3-216ENST00000610401 KEAP1Q14145 624 aa19.68■□□□□ 0.74
SSBP3-216ENST00000610401 CRTC1Q6UUV9 634 aa19.68■□□□□ 0.74
SSBP3-216ENST00000610401 OTUB1Q96FW1 271 aaPredicted RBP19.68■□□□□ 0.74
SSBP3-216ENST00000610401 ZFYVE19Q96K21 471 aa19.68■□□□□ 0.74
SSBP3-216ENST00000610401 RRAGCQ9HB90 399 aa19.68■□□□□ 0.74
SSBP3-216ENST00000610401 MYO10Q9HD67 2058 aa19.68■□□□□ 0.74
SSBP3-216ENST00000610401 METTL15A6NJ78 407 aa19.68■□□□□ 0.74
SSBP3-216ENST00000610401 SYN3O14994 580 aa19.68■□□□□ 0.74
SSBP3-216ENST00000610401 CSF2P04141 144 aa19.68■□□□□ 0.74
SSBP3-216ENST00000610401 CKMP06732 381 aa19.68■□□□□ 0.74
SSBP3-216ENST00000610401 ZNF24P17028 368 aa19.68■□□□□ 0.74
SSBP3-216ENST00000610401 SSTR4P31391 388 aa19.68■□□□□ 0.74
SSBP3-216ENST00000610401 CD70P32970 193 aa19.68■□□□□ 0.74
SSBP3-216ENST00000610401 PTGER1P34995 402 aa19.68■□□□□ 0.74
SSBP3-216ENST00000610401 BCL7AQ4VC05 210 aa19.68■□□□□ 0.74
SSBP3-216ENST00000610401 OTOP2Q7RTS6 562 aa19.68■□□□□ 0.74
SSBP3-216ENST00000610401 FAM124AQ86V42 546 aa19.68■□□□□ 0.74
SSBP3-216ENST00000610401 ST13P5Q8NFI4 369 aaPredicted RBP19.68■□□□□ 0.74
SSBP3-216ENST00000610401 B3GNT7Q8NFL0 401 aa19.68■□□□□ 0.74
SSBP3-216ENST00000610401 ACAT2Q9BWD1 397 aa19.68■□□□□ 0.74
SSBP3-216ENST00000610401 SGK2Q9HBY8 427 aa19.68■□□□□ 0.74
SSBP3-216ENST00000610401 SNTG1Q9NSN8 517 aa19.68■□□□□ 0.74
SSBP3-216ENST00000610401 NOX1Q9Y5S8 564 aa19.68■□□□□ 0.74
SSBP3-216ENST00000610401 SZT2Q5T011 3432 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 BDKRB1P46663 353 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 WNT3P56703 355 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 ELP6Q0PNE2 266 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 IL18R1Q13478 541 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 CPTPQ5TA50 214 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 C7orf57Q8NEG2 295 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 ITPKCQ96DU7 683 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 SCLYQ96I15 445 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 LINC00597Q9H2U6 94 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 Q9Y3F1 56 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 H7C0S8 307 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 ADAMTS4O75173 837 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 TGFB1P01137 390 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 RPLP0P05388 317 aaKnown RBP19.67■□□□□ 0.74
SSBP3-216ENST00000610401 BMPR1AP36894 532 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 MAGEA2P43356 314 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 GJA8P48165 433 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 CAP1Q01518 475 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 EIF3MQ7L2H7 374 aaKnown RBP19.67■□□□□ 0.74
SSBP3-216ENST00000610401 BBS7Q8IWZ6 715 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 ADPRHL2Q9NX46 363 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 VPS29Q9UBQ0 182 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 PCDHGA3Q9Y5H0 932 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 TTC36A6NLP5 189 aa19.67■□□□□ 0.74
SSBP3-216ENST00000610401 PRPS2P11908 318 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms