RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 HNF4AP41235 474 aa21.58■■□□□ 1.05
SHANK2-220ENST00000608988 ASMTP46597 345 aa21.58■■□□□ 1.05
SHANK2-220ENST00000608988 ZFP69Q49AA0 526 aa21.58■■□□□ 1.05
SHANK2-220ENST00000608988 ADGRF1Q5T601 910 aa21.58■■□□□ 1.05
SHANK2-220ENST00000608988 ERAP2Q6P179 960 aa21.58■■□□□ 1.05
SHANK2-220ENST00000608988 MBOAT1Q6ZNC8 495 aa21.58■■□□□ 1.05
SHANK2-220ENST00000608988 GALNT10Q86SR1 603 aa21.58■■□□□ 1.05
SHANK2-220ENST00000608988 RAB43Q86YS6 212 aa21.58■■□□□ 1.05
SHANK2-220ENST00000608988 NLGN4XQ8N0W4 816 aa21.58■■□□□ 1.05
SHANK2-220ENST00000608988 CYP4Z2PQ8N1L4 340 aa21.58■■□□□ 1.05
SHANK2-220ENST00000608988 B3GALT6Q96L58 329 aa21.58■■□□□ 1.05
SHANK2-220ENST00000608988 MAPKAP1Q9BPZ7 522 aa21.58■■□□□ 1.05
SHANK2-220ENST00000608988 ZNF556Q9HAH1 456 aa21.58■■□□□ 1.05
SHANK2-220ENST00000608988 ASAH2Q9NR71 780 aa21.58■■□□□ 1.05
SHANK2-220ENST00000608988 NDUFAF4Q9P032 175 aa21.58■■□□□ 1.05
SHANK2-220ENST00000608988 RNF181Q9P0P0 153 aa21.58■■□□□ 1.05
SHANK2-220ENST00000608988 FZD4Q9ULV1 537 aa21.58■■□□□ 1.05
SHANK2-220ENST00000608988 DUSP12Q9UNI6 340 aa21.58■■□□□ 1.05
SHANK2-220ENST00000608988 CENPXA8MT69 81 aa21.58■■□□□ 1.04
SHANK2-220ENST00000608988 AGAP14A8MT82 685 aa21.58■■□□□ 1.04
SHANK2-220ENST00000608988 TSPAN3O60637 253 aa21.58■■□□□ 1.04
SHANK2-220ENST00000608988 HIST1H2AGP0C0S8 130 aaPredicted RBP21.58■■□□□ 1.04
SHANK2-220ENST00000608988 HIST1H2ADP20671 130 aa21.58■■□□□ 1.04
SHANK2-220ENST00000608988 MAPK8P45983 427 aa21.58■■□□□ 1.04
SHANK2-220ENST00000608988 CDK10Q15131 360 aa21.58■■□□□ 1.04
SHANK2-220ENST00000608988 LRRC26Q2I0M4 334 aa21.58■■□□□ 1.04
SHANK2-220ENST00000608988 HIST1H2AHQ96KK5 128 aa21.58■■□□□ 1.04
SHANK2-220ENST00000608988 WDFY2Q96P53 400 aa21.58■■□□□ 1.04
SHANK2-220ENST00000608988 FAM193BQ96PV7 902 aaPredicted RBP21.58■■□□□ 1.04
SHANK2-220ENST00000608988 OR2A14Q96R47 310 aa21.58■■□□□ 1.04
SHANK2-220ENST00000608988 HIST1H2AJQ99878 128 aa21.58■■□□□ 1.04
SHANK2-220ENST00000608988 DPH2Q9BQC3 489 aaPredicted RBP21.58■■□□□ 1.04
SHANK2-220ENST00000608988 H2AFJQ9BTM1 129 aa21.58■■□□□ 1.04
SHANK2-220ENST00000608988 SMURF1Q9HCE7 757 aa21.58■■□□□ 1.04
SHANK2-220ENST00000608988 RAD18Q9NS91 495 aa21.58■■□□□ 1.04
SHANK2-220ENST00000608988 PRG3Q9Y2Y8 225 aaPredicted RBP21.58■■□□□ 1.04
SHANK2-220ENST00000608988 SCN8AQ9UQD0 1980 aa21.58■■□□□ 1.04
SHANK2-220ENST00000608988 FRMPD3Q5JV73 1810 aa21.57■■□□□ 1.04
SHANK2-220ENST00000608988 SLC35F4A4IF30 521 aa21.57■■□□□ 1.04
SHANK2-220ENST00000608988 HMX3A6NHT5 357 aa21.57■■□□□ 1.04
SHANK2-220ENST00000608988 H3BQ06 376 aaPredicted RBP21.57■■□□□ 1.04
SHANK2-220ENST00000608988 CPSF4O95639 269 aaKnown RBP21.57■■□□□ 1.04
SHANK2-220ENST00000608988 TRBC1P01850 177 aa21.57■■□□□ 1.04
SHANK2-220ENST00000608988 ALPIP09923 528 aa21.57■■□□□ 1.04
SHANK2-220ENST00000608988 HSD3B1P14060 373 aa21.57■■□□□ 1.04
SHANK2-220ENST00000608988 HSD3B2P26439 372 aa21.57■■□□□ 1.04
SHANK2-220ENST00000608988 AOAHP28039 575 aa21.57■■□□□ 1.04
SHANK2-220ENST00000608988 CDC42P60953 191 aa21.57■■□□□ 1.04
SHANK2-220ENST00000608988 NKX3-2P78367 333 aa21.57■■□□□ 1.04
SHANK2-220ENST00000608988 IFI44LQ53G44 452 aa21.57■■□□□ 1.04
SHANK2-220ENST00000608988 CLLU1OSQ5K130 101 aa21.57■■□□□ 1.04
SHANK2-220ENST00000608988 LIPJQ5W064 366 aa21.57■■□□□ 1.04
SHANK2-220ENST00000608988 ZNF517Q6ZMY9 492 aaPredicted RBP21.57■■□□□ 1.04
SHANK2-220ENST00000608988 UBE2R2Q712K3 238 aaPredicted RBP21.57■■□□□ 1.04
SHANK2-220ENST00000608988 ATCAYQ86WG3 371 aa21.57■■□□□ 1.04
SHANK2-220ENST00000608988 TRIM69Q86WT6 500 aa21.57■■□□□ 1.04
SHANK2-220ENST00000608988 MGLLQ99685 303 aa21.57■■□□□ 1.04
SHANK2-220ENST00000608988 PTPN18Q99952 460 aa21.57■■□□□ 1.04
SHANK2-220ENST00000608988 DUSP26Q9BV47 211 aa21.57■■□□□ 1.04
SHANK2-220ENST00000608988 ZDHHC3Q9NYG2 299 aa21.57■■□□□ 1.04
SHANK2-220ENST00000608988 TBC1D24Q9ULP9 559 aa21.57■■□□□ 1.04
SHANK2-220ENST00000608988 CAB39Q9Y376 341 aaPredicted RBP21.57■■□□□ 1.04
SHANK2-220ENST00000608988 A0A0U1RQS6 177 aa21.56■■□□□ 1.04
SHANK2-220ENST00000608988 C1orf226A1L170 272 aa21.56■■□□□ 1.04
SHANK2-220ENST00000608988 ARRDC5A6NEK1 342 aa21.56■■□□□ 1.04
SHANK2-220ENST00000608988 GFRA2O00451 464 aa21.56■■□□□ 1.04
SHANK2-220ENST00000608988 CXCR2P25025 360 aa21.56■■□□□ 1.04
SHANK2-220ENST00000608988 CORO1AP31146 461 aaKnown RBP21.56■■□□□ 1.04
SHANK2-220ENST00000608988 SGSHP51688 502 aa21.56■■□□□ 1.04
SHANK2-220ENST00000608988 CRYBA2P53672 197 aa21.56■■□□□ 1.04
SHANK2-220ENST00000608988 RGNQ15493 299 aa21.56■■□□□ 1.04
SHANK2-220ENST00000608988 CHRNA6Q15825 494 aa21.56■■□□□ 1.04
SHANK2-220ENST00000608988 CDKN3Q16667 212 aa21.56■■□□□ 1.04
SHANK2-220ENST00000608988 VN1R5Q7Z5H4 357 aa21.56■■□□□ 1.04
SHANK2-220ENST00000608988 TSEN54Q7Z6J9 526 aaKnown RBP21.56■■□□□ 1.04
SHANK2-220ENST00000608988 SLC44A2Q8IWA5 706 aaPredicted RBP21.56■■□□□ 1.04
SHANK2-220ENST00000608988 TAPBPLQ9BX59 468 aa21.56■■□□□ 1.04
SHANK2-220ENST00000608988 SLA2Q9H6Q3 261 aa21.56■■□□□ 1.04
SHANK2-220ENST00000608988 TAS2R9Q9NYW1 312 aa21.56■■□□□ 1.04
SHANK2-220ENST00000608988 ZNF282Q9UDV7 671 aaPredicted RBP21.56■■□□□ 1.04
SHANK2-220ENST00000608988 VPS4AQ9UN37 437 aa21.56■■□□□ 1.04
SHANK2-220ENST00000608988 TMEM229AB2RXF0 380 aa21.56■■□□□ 1.04
SHANK2-220ENST00000608988 SCAMP2O15127 329 aaKnown RBP21.56■■□□□ 1.04
SHANK2-220ENST00000608988 SOCS5O75159 536 aa21.56■■□□□ 1.04
SHANK2-220ENST00000608988 VNN2O95498 520 aa21.56■■□□□ 1.04
SHANK2-220ENST00000608988 BPIP17213 487 aa21.56■■□□□ 1.04
SHANK2-220ENST00000608988 MAGP20916 626 aa21.56■■□□□ 1.04
SHANK2-220ENST00000608988 ENDOUP21128 410 aaKnown RBP21.56■■□□□ 1.04
SHANK2-220ENST00000608988 CSNK1DP48730 415 aa21.56■■□□□ 1.04
SHANK2-220ENST00000608988 IDH2P48735 452 aaKnown RBP21.56■■□□□ 1.04
SHANK2-220ENST00000608988 AP1S2P56377 157 aa21.56■■□□□ 1.04
SHANK2-220ENST00000608988 RBBP4Q09028 425 aa21.56■■□□□ 1.04
SHANK2-220ENST00000608988 BCL7AQ4VC05 210 aa21.56■■□□□ 1.04
SHANK2-220ENST00000608988 HECTD3Q5T447 861 aa21.56■■□□□ 1.04
SHANK2-220ENST00000608988 LINGO4Q6UY18 593 aa21.56■■□□□ 1.04
SHANK2-220ENST00000608988 Q6ZPB1 254 aaPredicted RBP21.56■■□□□ 1.04
SHANK2-220ENST00000608988 LGI4Q8N135 537 aa21.56■■□□□ 1.04
SHANK2-220ENST00000608988 TTC16Q8NEE8 873 aa21.56■■□□□ 1.04
SHANK2-220ENST00000608988 SOCS4Q8WXH5 440 aa21.56■■□□□ 1.04
SHANK2-220ENST00000608988 CCM2Q9BSQ5 444 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms