RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 SLC1A2P43004 574 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 IDH2P48735 452 aaKnown RBP12.16□□□□□ -0.46
CTCFL-218ENST00000608440 DEFA5Q01523 94 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 HSF2Q03933 536 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 USP39Q53GS9 565 aaKnown RBP12.16□□□□□ -0.46
CTCFL-218ENST00000608440 RUNDC3AQ59EK9 446 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 C5orf46Q6UWT4 87 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 HTR3DQ70Z44 454 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 PAQR7Q86WK9 346 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 FAM126BQ8IXS8 530 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 Q8N402 240 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 GPR152Q8TDT2 470 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 COL21A1Q96P44 957 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 KCNC2Q96PR1 638 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 PARK7Q99497 189 aaKnown RBP12.16□□□□□ -0.46
CTCFL-218ENST00000608440 GORASP2Q9H8Y8 452 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 LYARQ9NX58 379 aaKnown RBP12.16□□□□□ -0.46
CTCFL-218ENST00000608440 ADAMTS5Q9UNA0 930 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 COMMD10Q9Y6G5 202 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 A0A087X1B8 175 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 A0A0G2JLL6 359 aaPredicted RBP12.16□□□□□ -0.46
CTCFL-218ENST00000608440 M0R233 179 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 MUSKO15146 869 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 CHRM5P08912 532 aaPredicted RBP12.16□□□□□ -0.46
CTCFL-218ENST00000608440 CPB1P15086 417 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 CXCL3P19876 107 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 INPP1P49441 399 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 VSX2P58304 361 aaPredicted RBP12.16□□□□□ -0.46
CTCFL-218ENST00000608440 SSTP61278 116 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 RPS7P62081 194 aaKnown RBP12.16□□□□□ -0.46
CTCFL-218ENST00000608440 SSX1Q16384 188 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 MICAQ29983 383 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 TIMM50Q3ZCQ8 353 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 GPR33Q49SQ1 333 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 KLHL22Q53GT1 634 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 PAN3Q58A45 887 aaKnown RBP12.16□□□□□ -0.46
CTCFL-218ENST00000608440 ZNF789Q5FWF6 425 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 PKN3Q6P5Z2 889 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 PRRT2Q7Z6L0 340 aaPredicted RBP12.16□□□□□ -0.46
CTCFL-218ENST00000608440 ATCAYQ86WG3 371 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 ZDHHC21Q8IVQ6 265 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 PHACTR4Q8IZ21 702 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 DNAJC22Q8N4W6 341 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 BTN2A2Q8WVV5 523 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 MARVELD1Q9BSK0 173 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 IKZF5Q9H5V7 419 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 SLC22A11Q9NSA0 550 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 VAPAQ9P0L0 249 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 DTX4Q9Y2E6 619 aa12.16□□□□□ -0.46
CTCFL-218ENST00000608440 COL11A1P12107 1806 aaPredicted RBP12.15□□□□□ -0.46
CTCFL-218ENST00000608440 MDM4O15151 490 aa12.15□□□□□ -0.46
CTCFL-218ENST00000608440 TREHO43280 583 aa12.15□□□□□ -0.46
CTCFL-218ENST00000608440 SIGLEC6O43699 453 aa12.15□□□□□ -0.46
CTCFL-218ENST00000608440 SLC43A1O75387 559 aa12.15□□□□□ -0.46
CTCFL-218ENST00000608440 MYCLP12524 364 aaPredicted RBP12.15□□□□□ -0.46
CTCFL-218ENST00000608440 HLA-FP30511 346 aa12.15□□□□□ -0.46
CTCFL-218ENST00000608440 ARFIP1P53367 373 aa12.15□□□□□ -0.46
CTCFL-218ENST00000608440 NPRL3Q12980 569 aa12.15□□□□□ -0.46
CTCFL-218ENST00000608440 C10orf62Q5T681 223 aaPredicted RBP12.15□□□□□ -0.46
CTCFL-218ENST00000608440 ESRP1Q6NXG1 681 aaKnown RBP12.15□□□□□ -0.46
CTCFL-218ENST00000608440 OVCH2Q7RTZ1 564 aa12.15□□□□□ -0.46
CTCFL-218ENST00000608440 LUZP2Q86TE4 346 aa12.15□□□□□ -0.46
CTCFL-218ENST00000608440 CRISPLD1Q9H336 500 aa12.15□□□□□ -0.46
CTCFL-218ENST00000608440 SLC28A3Q9HAS3 691 aa12.15□□□□□ -0.46
CTCFL-218ENST00000608440 TMPRSS4Q9NRS4 437 aa12.15□□□□□ -0.46
CTCFL-218ENST00000608440 AIG1Q9NVV5 245 aa12.15□□□□□ -0.46
CTCFL-218ENST00000608440 TRPM5Q9NZQ8 1165 aa12.15□□□□□ -0.46
CTCFL-218ENST00000608440 TO15178 435 aa12.15□□□□□ -0.47
CTCFL-218ENST00000608440 ZBTB24O43167 697 aaPredicted RBP12.15□□□□□ -0.47
CTCFL-218ENST00000608440 AP2A2O94973 939 aa12.15□□□□□ -0.47
CTCFL-218ENST00000608440 CDRT1O95170 752 aa12.15□□□□□ -0.47
CTCFL-218ENST00000608440 ZNF682O95780 498 aa12.15□□□□□ -0.47
CTCFL-218ENST00000608440 LTA4HP09960 611 aaKnown RBP12.15□□□□□ -0.47
CTCFL-218ENST00000608440 SDHBP21912 280 aa12.15□□□□□ -0.47
CTCFL-218ENST00000608440 OAZ1P54368 228 aa12.15□□□□□ -0.47
CTCFL-218ENST00000608440 SP4Q02446 784 aa12.15□□□□□ -0.47
CTCFL-218ENST00000608440 ZNF57Q68EA5 555 aaPredicted RBP12.15□□□□□ -0.47
CTCFL-218ENST00000608440 SLC22A9Q8IVM8 553 aa12.15□□□□□ -0.47
CTCFL-218ENST00000608440 PTGR2Q8N8N7 351 aaPredicted RBP12.15□□□□□ -0.47
CTCFL-218ENST00000608440 DUSP18Q8NEJ0 188 aa12.15□□□□□ -0.47
CTCFL-218ENST00000608440 COQ8AQ8NI60 647 aa12.15□□□□□ -0.47
CTCFL-218ENST00000608440 NETO1Q8TDF5 533 aa12.15□□□□□ -0.47
CTCFL-218ENST00000608440 C2CD4CQ8TF44 421 aa12.15□□□□□ -0.47
CTCFL-218ENST00000608440 WDFY2Q96P53 400 aa12.15□□□□□ -0.47
CTCFL-218ENST00000608440 TMEM175Q9BSA9 504 aa12.15□□□□□ -0.47
CTCFL-218ENST00000608440 POLR3FQ9H1D9 316 aaPredicted RBP12.15□□□□□ -0.47
CTCFL-218ENST00000608440 RRAGCQ9HB90 399 aa12.15□□□□□ -0.47
CTCFL-218ENST00000608440 SLC2A6Q9UGQ3 507 aa12.15□□□□□ -0.47
CTCFL-218ENST00000608440 ERVW-1Q9UQF0 538 aa12.15□□□□□ -0.47
CTCFL-218ENST00000608440 ZNF451Q9Y4E5 1061 aa12.15□□□□□ -0.47
CTCFL-218ENST00000608440 PCDHGA6Q9Y5G7 932 aa12.15□□□□□ -0.47
CTCFL-218ENST00000608440 ELOVL7A1L3X0 281 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 LCHNA4D1U4 455 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 GFRA2O00451 464 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 ABCD4O14678 606 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 PDCD5O14737 125 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 SNAPINO95295 136 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 LPLP06858 475 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 RAB13P51153 203 aa12.14□□□□□ -0.47
CTCFL-218ENST00000608440 AGFG1P52594 562 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms