RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 IGHV5-51A0A0C4DH38 117 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 A0A0J9YVX5 310 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 SERTM1A2A2V5 107 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 SLC28A1O00337 649 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 FOXE1O00358 373 aaPredicted RBP10.66□□□□□ -0.7
CTCFL-214ENST00000608108 NDUFS4O43181 175 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 VPS4BO75351 444 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 SH3BGRLO75368 114 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 ZBTB11O95625 1053 aaPredicted RBP10.66□□□□□ -0.7
CTCFL-214ENST00000608108 HSD3B1P14060 373 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 HSD3B2P26439 372 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 GSTM2P28161 218 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 AHRP35869 848 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 RPS13P62277 151 aaKnown RBP10.66□□□□□ -0.7
CTCFL-214ENST00000608108 NHLH1Q02575 133 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 SQSTM1Q13501 440 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 TERF2Q15554 542 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 GALNTL6Q49A17 601 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 ATP6AP1LQ52LC2 224 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 SNAP47Q5SQN1 464 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 STPG1Q5TH74 334 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 TMEM71Q6P5X7 295 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 Q6ZSR9 355 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 RNF44Q7L0R7 432 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 ASCL5Q7RTU5 278 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 TMPRSS9Q7Z410 1059 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 PRSS42Q7Z5A4 293 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 CACNA2D3Q8IZS8 1091 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 ANKS4BQ8N8V4 417 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 ACTRT2Q8TDY3 377 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 STON2Q8WXE9 905 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 SEC16BQ96JE7 1060 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 GFM1Q96RP9 751 aaKnown RBP10.66□□□□□ -0.7
CTCFL-214ENST00000608108 ZFYVE21Q9BQ24 234 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 AKTIPQ9H8T0 292 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 SYNPO2LQ9H987 977 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 SOHLH2Q9NX45 425 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 GIMAP2Q9UG22 337 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 PILRAQ9UKJ1 303 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 ARL2BPQ9Y2Y0 163 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 CCL27Q9Y4X3 112 aa10.66□□□□□ -0.7
CTCFL-214ENST00000608108 A8MU76 341 aa10.65□□□□□ -0.7
CTCFL-214ENST00000608108 E9PBE3 544 aa10.65□□□□□ -0.7
CTCFL-214ENST00000608108 LSM1O15116 133 aaKnown RBP10.65□□□□□ -0.7
CTCFL-214ENST00000608108 MAP3K7O43318 606 aa10.65□□□□□ -0.7
CTCFL-214ENST00000608108 KLHL41O60662 606 aa10.65□□□□□ -0.7
CTCFL-214ENST00000608108 RSL1D1O76021 490 aaKnown RBP10.65□□□□□ -0.7
CTCFL-214ENST00000608108 ETHE1O95571 254 aa10.65□□□□□ -0.7
CTCFL-214ENST00000608108 STATHP02808 62 aa10.65□□□□□ -0.7
CTCFL-214ENST00000608108 SERPIND1P05546 499 aa10.65□□□□□ -0.7
CTCFL-214ENST00000608108 MLLT3P42568 568 aaPredicted RBP10.65□□□□□ -0.7
CTCFL-214ENST00000608108 ACADVLP49748 655 aa10.65□□□□□ -0.7
CTCFL-214ENST00000608108 SEPHS1P49903 392 aa10.65□□□□□ -0.7
CTCFL-214ENST00000608108 RELAQ04206 551 aa10.65□□□□□ -0.7
CTCFL-214ENST00000608108 GABPB1Q06547 395 aaPredicted RBP10.65□□□□□ -0.7
CTCFL-214ENST00000608108 TUBB3Q13509 450 aa10.65□□□□□ -0.7
CTCFL-214ENST00000608108 CLPPQ16740 277 aaPredicted RBP10.65□□□□□ -0.7
CTCFL-214ENST00000608108 LSM12Q3MHD2 195 aaKnown RBP10.65□□□□□ -0.7
CTCFL-214ENST00000608108 SPDYAQ5MJ70 313 aa10.65□□□□□ -0.7
CTCFL-214ENST00000608108 FBXO42Q6P3S6 717 aa10.65□□□□□ -0.7
CTCFL-214ENST00000608108 LARP4Q71RC2 724 aaKnown RBP eCLIP10.65□□□□□ -0.71e-7■■□□□ 12.6
CTCFL-214ENST00000608108 ALYREFQ86V81 257 aaKnown RBP10.65□□□□□ -0.7
CTCFL-214ENST00000608108 TRPV3Q8NET8 790 aa10.65□□□□□ -0.7
CTCFL-214ENST00000608108 OR4D9Q8NGE8 314 aa10.65□□□□□ -0.7
CTCFL-214ENST00000608108 CEP70Q8NHQ1 597 aa10.65□□□□□ -0.7
CTCFL-214ENST00000608108 RERGQ96A58 199 aaPredicted RBP10.65□□□□□ -0.7
CTCFL-214ENST00000608108 TCTN2Q96GX1 697 aa10.65□□□□□ -0.7
CTCFL-214ENST00000608108 OR2A5Q96R48 311 aa10.65□□□□□ -0.7
CTCFL-214ENST00000608108 CDC6Q99741 560 aa10.65□□□□□ -0.7
CTCFL-214ENST00000608108 DPYSL5Q9BPU6 564 aa10.65□□□□□ -0.7
CTCFL-214ENST00000608108 CCDC28BQ9BUN5 200 aa10.65□□□□□ -0.7
CTCFL-214ENST00000608108 FAM60AQ9NP50 221 aa10.65□□□□□ -0.7
CTCFL-214ENST00000608108 VPS29Q9UBQ0 182 aa10.65□□□□□ -0.7
CTCFL-214ENST00000608108 SLC12A4Q9UP95 1085 aa10.65□□□□□ -0.7
CTCFL-214ENST00000608108 AP1M2Q9Y6Q5 423 aa10.65□□□□□ -0.7
CTCFL-214ENST00000608108 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.64□□□□□ -0.71
CTCFL-214ENST00000608108 D6RAR5 112 aa10.64□□□□□ -0.71
CTCFL-214ENST00000608108 TOX3O15405 576 aaPredicted RBP10.64□□□□□ -0.71
CTCFL-214ENST00000608108 PEX11AO75192 247 aa10.64□□□□□ -0.71
CTCFL-214ENST00000608108 CLEC3AO75596 197 aa10.64□□□□□ -0.71
CTCFL-214ENST00000608108 TGFB1P01137 390 aa10.64□□□□□ -0.71
CTCFL-214ENST00000608108 THRAP10827 490 aa10.64□□□□□ -0.71
CTCFL-214ENST00000608108 LBPP18428 481 aa10.64□□□□□ -0.71
CTCFL-214ENST00000608108 ARL4DP49703 201 aa10.64□□□□□ -0.71
CTCFL-214ENST00000608108 RPL38P63173 70 aaKnown RBP10.64□□□□□ -0.71
CTCFL-214ENST00000608108 HSD11B2P80365 405 aa10.64□□□□□ -0.71
CTCFL-214ENST00000608108 SPIDRQ14159 915 aa10.64□□□□□ -0.71
CTCFL-214ENST00000608108 AP5B1Q2VPB7 878 aa10.64□□□□□ -0.71
CTCFL-214ENST00000608108 DEFB110Q30KQ9 67 aa10.64□□□□□ -0.71
CTCFL-214ENST00000608108 ZC3H12BQ5HYM0 836 aaKnown RBP10.64□□□□□ -0.71
CTCFL-214ENST00000608108 TMEM198Q66K66 360 aa10.64□□□□□ -0.71
CTCFL-214ENST00000608108 FRMPD2BQ6IN97 320 aa10.64□□□□□ -0.71
CTCFL-214ENST00000608108 ZNF574Q6ZN55 896 aaPredicted RBP10.64□□□□□ -0.71
CTCFL-214ENST00000608108 VN1R4Q7Z5H5 301 aa10.64□□□□□ -0.71
CTCFL-214ENST00000608108 ASPGQ86U10 573 aa10.64□□□□□ -0.71
CTCFL-214ENST00000608108 FNDC5Q8NAU1 212 aa10.64□□□□□ -0.71
CTCFL-214ENST00000608108 CREB3L4Q8TEY5 395 aa10.64□□□□□ -0.71
CTCFL-214ENST00000608108 SLC13A3Q8WWT9 602 aa10.64□□□□□ -0.71
CTCFL-214ENST00000608108 THAP11Q96EK4 314 aa10.64□□□□□ -0.71
CTCFL-214ENST00000608108 CMTM7Q96FZ5 175 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms