RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 GFM2Q969S9 779 aaKnown RBP20.68■□□□□ 0.9
USP6NL-204ENST00000606752 SARGQ9BW04 601 aa20.68■□□□□ 0.9
USP6NL-204ENST00000606752 FAM221BA6H8Z2 402 aa20.67■□□□□ 0.9
USP6NL-204ENST00000606752 AKAP10O43572 662 aa20.67■□□□□ 0.9
USP6NL-204ENST00000606752 SRSF11Q05519 484 aaKnown RBP20.67■□□□□ 0.9
USP6NL-204ENST00000606752 TSSK4Q6SA08 328 aa20.67■□□□□ 0.9
USP6NL-204ENST00000606752 PLD3Q8IV08 490 aa20.67■□□□□ 0.9
USP6NL-204ENST00000606752 SFTPA2Q8IWL1 248 aa20.67■□□□□ 0.9
USP6NL-204ENST00000606752 RBM12BQ8IXT5 1001 aaKnown RBP20.67■□□□□ 0.9
USP6NL-204ENST00000606752 TBC1D19Q8N5T2 526 aa20.67■□□□□ 0.9
USP6NL-204ENST00000606752 DNAJB14Q8TBM8 379 aa20.67■□□□□ 0.9
USP6NL-204ENST00000606752 SUCOQ9UBS9 1254 aaKnown RBP20.67■□□□□ 0.9
USP6NL-204ENST00000606752 PCDHA9Q9Y5H5 950 aa20.67■□□□□ 0.9
USP6NL-204ENST00000606752 C15orf38-AP3S2A0A0A6YYH1 394 aa20.67■□□□□ 0.9
USP6NL-204ENST00000606752 VILLO15195 856 aa20.67■□□□□ 0.9
USP6NL-204ENST00000606752 CLEC3AO75596 197 aa20.67■□□□□ 0.9
USP6NL-204ENST00000606752 KCNH1O95259 989 aa20.67■□□□□ 0.9
USP6NL-204ENST00000606752 TCN1P20061 433 aaPredicted RBP20.67■□□□□ 0.9
USP6NL-204ENST00000606752 GSTM2P28161 218 aa20.67■□□□□ 0.9
USP6NL-204ENST00000606752 MSX2P35548 267 aaPredicted RBP20.67■□□□□ 0.9
USP6NL-204ENST00000606752 PHC1P78364 1004 aa20.67■□□□□ 0.9
USP6NL-204ENST00000606752 PGS1Q32NB8 556 aa20.67■□□□□ 0.9
USP6NL-204ENST00000606752 SPATS1Q496A3 300 aa20.67■□□□□ 0.9
USP6NL-204ENST00000606752 ZNF425Q6IV72 752 aa20.67■□□□□ 0.9
USP6NL-204ENST00000606752 NANOGP8Q6NSW7 305 aa20.67■□□□□ 0.9
USP6NL-204ENST00000606752 ARPINQ7Z6K5 226 aa20.67■□□□□ 0.9
USP6NL-204ENST00000606752 GPR180Q86V85 440 aa20.67■□□□□ 0.9
USP6NL-204ENST00000606752 GKN2Q86XP6 184 aa20.67■□□□□ 0.9
USP6NL-204ENST00000606752 KIAA2013Q8IYS2 634 aa20.67■□□□□ 0.9
USP6NL-204ENST00000606752 WDR48Q8TAF3 677 aa20.67■□□□□ 0.9
USP6NL-204ENST00000606752 JADE3Q92613 823 aa20.67■□□□□ 0.9
USP6NL-204ENST00000606752 EDAQ92838 391 aa20.67■□□□□ 0.9
USP6NL-204ENST00000606752 NANOGQ9H9S0 305 aa20.67■□□□□ 0.9
USP6NL-204ENST00000606752 CMTM6Q9NX76 183 aa20.67■□□□□ 0.9
USP6NL-204ENST00000606752 SPASTQ9UBP0 616 aa20.67■□□□□ 0.9
USP6NL-204ENST00000606752 BCAP29Q9UHQ4 241 aa20.67■□□□□ 0.9
USP6NL-204ENST00000606752 MCM8Q9UJA3 840 aa20.67■□□□□ 0.9
USP6NL-204ENST00000606752 OR6C74A6NCV1 312 aa20.66■□□□□ 0.9
USP6NL-204ENST00000606752 NME4O00746 187 aa20.66■□□□□ 0.9
USP6NL-204ENST00000606752 MAP3K7O43318 606 aa20.66■□□□□ 0.9
USP6NL-204ENST00000606752 PSMG1O95456 288 aa20.66■□□□□ 0.9
USP6NL-204ENST00000606752 CSNK1EP49674 416 aaKnown RBP20.66■□□□□ 0.9
USP6NL-204ENST00000606752 MS4A2Q01362 244 aa20.66■□□□□ 0.9
USP6NL-204ENST00000606752 ZNF763Q0D2J5 394 aa20.66■□□□□ 0.9
USP6NL-204ENST00000606752 CCNIQ14094 377 aa20.66■□□□□ 0.9
USP6NL-204ENST00000606752 TRIM25Q14258 630 aaKnown RBP20.66■□□□□ 0.9
USP6NL-204ENST00000606752 UGT8Q16880 541 aa20.66■□□□□ 0.9
USP6NL-204ENST00000606752 MSANTD1Q6ZTZ1 278 aa20.66■□□□□ 0.9
USP6NL-204ENST00000606752 ENDOVQ8N8Q3 282 aaKnown RBP20.66■□□□□ 0.9
USP6NL-204ENST00000606752 FAM156AQ8NDB6 213 aa20.66■□□□□ 0.9
USP6NL-204ENST00000606752 DNAJB8Q8NHS0 232 aa20.66■□□□□ 0.9
USP6NL-204ENST00000606752 CDC26Q8NHZ8 85 aa20.66■□□□□ 0.9
USP6NL-204ENST00000606752 FLVCR1-AS1Q8TAF5 88 aa20.66■□□□□ 0.9
USP6NL-204ENST00000606752 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.66■□□□□ 0.9
USP6NL-204ENST00000606752 LMX1AQ8TE12 382 aa20.66■□□□□ 0.9
USP6NL-204ENST00000606752 CREB3L4Q8TEY5 395 aa20.66■□□□□ 0.9
USP6NL-204ENST00000606752 TMEM125Q96AQ2 219 aa20.66■□□□□ 0.9
USP6NL-204ENST00000606752 ASB9Q96DX5 294 aa20.66■□□□□ 0.9
USP6NL-204ENST00000606752 OR2A14Q96R47 310 aa20.66■□□□□ 0.9
USP6NL-204ENST00000606752 F2RL3Q96RI0 385 aa20.66■□□□□ 0.9
USP6NL-204ENST00000606752 CGREF1Q99674 301 aa20.66■□□□□ 0.9
USP6NL-204ENST00000606752 RMND5AQ9H871 391 aa20.66■□□□□ 0.9
USP6NL-204ENST00000606752 L3MBTL1Q9Y468 752 aa20.66■□□□□ 0.9
USP6NL-204ENST00000606752 ENTPD2Q9Y5L3 495 aa20.66■□□□□ 0.9
USP6NL-204ENST00000606752 HEATR5BQ9P2D3 2071 aa20.65■□□□□ 0.9
USP6NL-204ENST00000606752 ACOT8O14734 319 aa20.65■□□□□ 0.9
USP6NL-204ENST00000606752 HAT1O14929 419 aa20.65■□□□□ 0.9
USP6NL-204ENST00000606752 BCAT2O15382 392 aaPredicted RBP20.65■□□□□ 0.9
USP6NL-204ENST00000606752 KRT36O76013 467 aa20.65■□□□□ 0.9
USP6NL-204ENST00000606752 KLK1P06870 262 aa20.65■□□□□ 0.9
USP6NL-204ENST00000606752 POLR2CP19387 275 aaPredicted RBP20.65■□□□□ 0.9
USP6NL-204ENST00000606752 AHRP35869 848 aa20.65■□□□□ 0.9
USP6NL-204ENST00000606752 BCL6P41182 706 aa20.65■□□□□ 0.9
USP6NL-204ENST00000606752 GRIA3P42263 894 aa20.65■□□□□ 0.9
USP6NL-204ENST00000606752 KIR3DL1P43629 444 aa20.65■□□□□ 0.9
USP6NL-204ENST00000606752 FNTBP49356 437 aa20.65■□□□□ 0.9
USP6NL-204ENST00000606752 HNRNPKP61978 463 aaKnown RBP eCLIP20.65■□□□□ 0.9
USP6NL-204ENST00000606752 HHEXQ03014 270 aa20.65■□□□□ 0.9
USP6NL-204ENST00000606752 FLOT2Q14254 428 aa20.65■□□□□ 0.9
USP6NL-204ENST00000606752 CCDC6Q16204 474 aa20.65■□□□□ 0.9
USP6NL-204ENST00000606752 HKDC1Q2TB90 917 aa20.65■□□□□ 0.9
USP6NL-204ENST00000606752 C6orf10Q5SRN2 563 aa20.65■□□□□ 0.9
USP6NL-204ENST00000606752 OR7A2PQ8NGA2 310 aa20.65■□□□□ 0.9
USP6NL-204ENST00000606752 CENPKQ9BS16 269 aa20.65■□□□□ 0.9
USP6NL-204ENST00000606752 NKX1-2Q9UD57 310 aaPredicted RBP20.65■□□□□ 0.9
USP6NL-204ENST00000606752 PCDHGA2Q9Y5H1 932 aa20.65■□□□□ 0.9
USP6NL-204ENST00000606752 CACNA1IQ9P0X4 2223 aa20.65■□□□□ 0.9
USP6NL-204ENST00000606752 B4DGG1 531 aa20.64■□□□□ 0.9
USP6NL-204ENST00000606752 PLPP1O14494 284 aa20.64■□□□□ 0.9
USP6NL-204ENST00000606752 BCAS2O75934 225 aaPredicted RBP20.64■□□□□ 0.9
USP6NL-204ENST00000606752 GBAP04062 536 aa20.64■□□□□ 0.9
USP6NL-204ENST00000606752 COX7A2P14406 83 aa20.64■□□□□ 0.9
USP6NL-204ENST00000606752 ERFP50548 548 aa20.64■□□□□ 0.9
USP6NL-204ENST00000606752 AFF3P51826 1226 aaKnown RBP20.64■□□□□ 0.9
USP6NL-204ENST00000606752 C21orf59P57076 290 aa20.64■□□□□ 0.9
USP6NL-204ENST00000606752 PLIN5Q00G26 463 aa20.64■□□□□ 0.9
USP6NL-204ENST00000606752 TMEM26Q6ZUK4 368 aa20.64■□□□□ 0.9
USP6NL-204ENST00000606752 OR8J2Q8NGG1 315 aa20.64■□□□□ 0.9
USP6NL-204ENST00000606752 ITCHQ96J02 903 aa20.64■□□□□ 0.9
USP6NL-204ENST00000606752 PRPF18Q99633 342 aaKnown RBP20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms