RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 GARNL3Q5VVW2 1013 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 FAM219BQ5XKK7 198 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 CAPN13Q6MZZ7 669 aaPredicted RBP10.1□□□□□ -0.79
TUBE1-210ENST00000604967 SLCO4C1Q6ZQN7 724 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 ASPGQ86U10 573 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 CUZD1Q86UP6 607 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 KLHDC8AQ8IYD2 350 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 CENPLQ8N0S6 344 aaPredicted RBP10.1□□□□□ -0.79
TUBE1-210ENST00000604967 MMGT1Q8N4V1 131 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 NKAPQ8N5F7 415 aaKnown RBP10.1□□□□□ -0.79
TUBE1-210ENST00000604967 PPM1NQ8N819 430 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 TEX19Q8NA77 164 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 CREB3L4Q8TEY5 395 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 SLC5A11Q8WWX8 675 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 ANKRD7Q92527 254 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 MIEF2Q96C03 454 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 CPNE1Q99829 537 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 WDR77Q9BQA1 342 aaPredicted RBP10.1□□□□□ -0.79
TUBE1-210ENST00000604967 VN1R1Q9GZP7 353 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 DERL2Q9GZP9 239 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 PCBD2Q9H0N5 130 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 GPAMQ9HCL2 828 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 LANCL2Q9NS86 450 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 NINJ2Q9NZG7 142 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 MAP4K5Q9Y4K4 846 aa10.1□□□□□ -0.79
TUBE1-210ENST00000604967 TRBC2A0A5B9 178 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 PEX12O00623 359 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 OR1F1O43749 312 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 NSA2O95478 260 aaKnown RBP10.09□□□□□ -0.79
TUBE1-210ENST00000604967 RNF224P0DH78 156 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 SMIM10L1P0DMW3 83 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 MTHFD2P13995 350 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 HRH2P25021 359 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 CCR8P51685 355 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 RRADP55042 308 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 CDKL1Q00532 357 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 KCNC4Q03721 635 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 NAA25Q14CX7 972 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 RBBP7Q16576 425 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 WHAMMP3Q1A5X7 153 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 VWA5B1Q5TIE3 1220 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 C8orf74Q6P047 294 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 TMEM205Q6UW68 189 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 NXPE4Q6UWF7 544 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 IGFL2Q6UWQ7 119 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 IGFL3Q6UXB1 125 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 CTAGE3PQ8IX95 158 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 GABPB2Q8TAK5 448 aaPredicted RBP10.09□□□□□ -0.79
TUBE1-210ENST00000604967 SLC13A3Q8WWT9 602 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 ZNF592Q92610 1267 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 RERGQ96A58 199 aaPredicted RBP10.09□□□□□ -0.79
TUBE1-210ENST00000604967 MRRFQ96E11 262 aaKnown RBP10.09□□□□□ -0.79
TUBE1-210ENST00000604967 MVB12AQ96EY5 273 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 SMIM10Q96HG1 83 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 IMMP1LQ96LU5 166 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 GPR78Q96P69 363 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 IP6K3Q96PC2 410 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 RBCK1Q9BYM8 510 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 RAB17Q9H0T7 212 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 CLMPQ9H6B4 373 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 POPDC3Q9HBV1 291 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 ZNF160Q9HCG1 818 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 SEMA3GQ9NS98 782 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 CTNNAL1Q9UBT7 734 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 NXT1Q9UKK6 140 aaKnown RBP10.09□□□□□ -0.79
TUBE1-210ENST00000604967 NAALAD2Q9Y3Q0 740 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 ZNF451Q9Y4E5 1061 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 LRRK2Q5S007 2527 aa10.09□□□□□ -0.79
TUBE1-210ENST00000604967 PTPN13Q12923 2485 aa10.08□□□□□ -0.8
TUBE1-210ENST00000604967 LOC102723996A0A087X1L8 192 aa10.08□□□□□ -0.8
TUBE1-210ENST00000604967 IGHV1-45A0A0A0MS14 117 aa10.08□□□□□ -0.8
TUBE1-210ENST00000604967 LRRC14BA6NHZ5 514 aa10.08□□□□□ -0.8
TUBE1-210ENST00000604967 NDUFS4O43181 175 aa10.08□□□□□ -0.8
TUBE1-210ENST00000604967 MAN1A2O60476 641 aa10.08□□□□□ -0.8
TUBE1-210ENST00000604967 CD63P08962 238 aa10.08□□□□□ -0.8
TUBE1-210ENST00000604967 GSTA2P09210 222 aa10.08□□□□□ -0.8
TUBE1-210ENST00000604967 HIST1H2AGP0C0S8 130 aaPredicted RBP10.08□□□□□ -0.8
TUBE1-210ENST00000604967 ZNF888P0CJ79 500 aaPredicted RBP10.08□□□□□ -0.8
TUBE1-210ENST00000604967 PIM1P11309 404 aaPredicted RBP10.08□□□□□ -0.8
TUBE1-210ENST00000604967 ACPPP15309 386 aa10.08□□□□□ -0.8
TUBE1-210ENST00000604967 HIST1H2ADP20671 130 aa10.08□□□□□ -0.8
TUBE1-210ENST00000604967 CCND1P24385 295 aa10.08□□□□□ -0.8
TUBE1-210ENST00000604967 SOX11P35716 441 aa10.08□□□□□ -0.8
TUBE1-210ENST00000604967 GGT5P36269 586 aa10.08□□□□□ -0.8
TUBE1-210ENST00000604967 HSPA7P48741 367 aa10.08□□□□□ -0.8
TUBE1-210ENST00000604967 AGTR2P50052 363 aa10.08□□□□□ -0.8
TUBE1-210ENST00000604967 ST13P50502 369 aaKnown RBP10.08□□□□□ -0.8
TUBE1-210ENST00000604967 EMP2P54851 167 aa10.08□□□□□ -0.8
TUBE1-210ENST00000604967 RAB10P61026 200 aa10.08□□□□□ -0.8
TUBE1-210ENST00000604967 RHAGQ02094 409 aa10.08□□□□□ -0.8
TUBE1-210ENST00000604967 CAV1Q03135 178 aa10.08□□□□□ -0.8
TUBE1-210ENST00000604967 CSHL1Q14406 222 aa10.08□□□□□ -0.8
TUBE1-210ENST00000604967 TUBB8Q3ZCM7 444 aa10.08□□□□□ -0.8
TUBE1-210ENST00000604967 DEFB134Q4QY38 66 aa10.08□□□□□ -0.8
TUBE1-210ENST00000604967 B3GNTL1Q67FW5 361 aaPredicted RBP10.08□□□□□ -0.8
TUBE1-210ENST00000604967 TMPRSS11BQ86T26 416 aa10.08□□□□□ -0.8
TUBE1-210ENST00000604967 ISCA2Q86U28 154 aa10.08□□□□□ -0.8
TUBE1-210ENST00000604967 CLEC1AQ8NC01 280 aa10.08□□□□□ -0.8
TUBE1-210ENST00000604967 OR51Q1Q8NH59 317 aa10.08□□□□□ -0.8
TUBE1-210ENST00000604967 NT5CQ8TCD5 201 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms