RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-223	ENST00000599223	CSNK1G2	P78368	415 aa		13.85	□□□□□ -0.19
IRF3-223	ENST00000599223	ZXDC	Q2QGD7	858 aa	Predicted RBP	13.85	□□□□□ -0.19
IRF3-223	ENST00000599223	BTBD16	Q32M84	506 aa		13.85	□□□□□ -0.19
IRF3-223	ENST00000599223	MFSD4B	Q5TF39	518 aa		13.85	□□□□□ -0.19
IRF3-223	ENST00000599223	ARMC3	Q5W041	872 aa		13.85	□□□□□ -0.19
IRF3-223	ENST00000599223	SP5	Q6BEB4	398 aa	Predicted RBP	13.85	□□□□□ -0.19
IRF3-223	ENST00000599223	PLAG1	Q6DJT9	500 aa		13.85	□□□□□ -0.19
IRF3-223	ENST00000599223	CPEB2	Q7Z5Q1	589 aa	Known RBP	13.85	□□□□□ -0.19
IRF3-223	ENST00000599223	ANKRD37	Q7Z713	158 aa		13.85	□□□□□ -0.19
IRF3-223	ENST00000599223	MCEMP1	Q8IX19	187 aa		13.85	□□□□□ -0.19
IRF3-223	ENST00000599223	KCT2	Q8NC54	265 aa		13.85	□□□□□ -0.19
IRF3-223	ENST00000599223	OR51Q1	Q8NH59	317 aa		13.85	□□□□□ -0.19
IRF3-223	ENST00000599223	MAIP1	Q8WWC4	291 aa		13.85	□□□□□ -0.19
IRF3-223	ENST00000599223	MS4A14	Q96JA4	679 aa		13.85	□□□□□ -0.19
IRF3-223	ENST00000599223	SIGLEC12	Q96PQ1	595 aa		13.85	□□□□□ -0.19
IRF3-223	ENST00000599223	AARSD1	Q9BTE6	412 aa	Known RBP	13.85	□□□□□ -0.19
IRF3-223	ENST00000599223	CCDC177	Q9NQR7	707 aa	Predicted RBP	13.85	□□□□□ -0.19
IRF3-223	ENST00000599223	UTP6	Q9NYH9	597 aa	Known RBP	13.85	□□□□□ -0.19
IRF3-223	ENST00000599223	SEC14L3	Q9UDX4	400 aa		13.85	□□□□□ -0.19
IRF3-223	ENST00000599223	F8	P00451	2351 aa		13.85	□□□□□ -0.19
IRF3-223	ENST00000599223	SDR42E2	A6NKP2	422 aa		13.84	□□□□□ -0.19
IRF3-223	ENST00000599223		A8MUI8	341 aa		13.84	□□□□□ -0.19
IRF3-223	ENST00000599223	TXNDC9	O14530	226 aa		13.84	□□□□□ -0.19
IRF3-223	ENST00000599223	CTIF	O43310	598 aa	Known RBP	13.84	□□□□□ -0.19
IRF3-223	ENST00000599223	HAUS5	O94927	633 aa		13.84	□□□□□ -0.19
IRF3-223	ENST00000599223	MLN	P12872	115 aa		13.84	□□□□□ -0.19
IRF3-223	ENST00000599223	RPS15A	P62244	130 aa	Known RBP	13.84	□□□□□ -0.19
IRF3-223	ENST00000599223	THOC5	Q13769	683 aa	Known RBP	13.84	□□□□□ -0.19
IRF3-223	ENST00000599223	CDSN	Q15517	529 aa		13.84	□□□□□ -0.19
IRF3-223	ENST00000599223	NDUFA9	Q16795	377 aa		13.84	□□□□□ -0.19
IRF3-223	ENST00000599223	PHKG1	Q16816	387 aa		13.84	□□□□□ -0.19
IRF3-223	ENST00000599223	TMEM207	Q6UWW9	146 aa		13.84	□□□□□ -0.19
IRF3-223	ENST00000599223	CRLF3	Q8IUI8	442 aa		13.84	□□□□□ -0.19
IRF3-223	ENST00000599223	MDS2	Q8NDY4	140 aa		13.84	□□□□□ -0.19
IRF3-223	ENST00000599223	MCU	Q8NE86	351 aa		13.84	□□□□□ -0.19
IRF3-223	ENST00000599223	TSLP	Q969D9	159 aa		13.84	□□□□□ -0.19
IRF3-223	ENST00000599223	TM4SF19	Q96DZ7	209 aa		13.84	□□□□□ -0.19
IRF3-223	ENST00000599223	CYTH2	Q99418	400 aa		13.84	□□□□□ -0.19
IRF3-223	ENST00000599223	EBNA1BP2	Q99848	306 aa	Known RBP	13.84	□□□□□ -0.19
IRF3-223	ENST00000599223	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	13.84	□□□□□ -0.19
IRF3-223	ENST00000599223	CCDC68	Q9H2F9	335 aa		13.84	□□□□□ -0.19
IRF3-223	ENST00000599223	XAB2	Q9HCS7	855 aa	Known RBP	13.84	□□□□□ -0.19
IRF3-223	ENST00000599223	C20orf96	Q9NUD7	363 aa	Predicted RBP	13.84	□□□□□ -0.19
IRF3-223	ENST00000599223	TMEM184C	Q9NVA4	438 aa		13.84	□□□□□ -0.19
IRF3-223	ENST00000599223	ANKRD10	Q9NXR5	420 aa		13.84	□□□□□ -0.19
IRF3-223	ENST00000599223	STMN3	Q9NZ72	180 aa		13.84	□□□□□ -0.19
IRF3-223	ENST00000599223	FBXO5	Q9UKT4	447 aa		13.84	□□□□□ -0.19
IRF3-223	ENST00000599223	PDE10A	Q9Y233	779 aa		13.84	□□□□□ -0.19
IRF3-223	ENST00000599223	KCNE1B	A0A087WTH5	132 aa		13.83	□□□□□ -0.2
IRF3-223	ENST00000599223	PGRMC1	O00264	195 aa	Known RBP	13.83	□□□□□ -0.2
IRF3-223	ENST00000599223	CCL21	O00585	134 aa		13.83	□□□□□ -0.2
IRF3-223	ENST00000599223	ZBTB14	O43829	449 aa		13.83	□□□□□ -0.2
IRF3-223	ENST00000599223	LCMT2	O60294	686 aa	Known RBP	13.83	□□□□□ -0.2
IRF3-223	ENST00000599223	BANF1	O75531	89 aa		13.83	□□□□□ -0.2
IRF3-223	ENST00000599223	CDC123	O75794	336 aa	Predicted RBP	13.83	□□□□□ -0.2
IRF3-223	ENST00000599223	CRYAB	P02511	175 aa	Known RBP	13.83	□□□□□ -0.2
IRF3-223	ENST00000599223	CDH1	P12830	882 aa		13.83	□□□□□ -0.2
IRF3-223	ENST00000599223	PGGT1B	P53609	377 aa		13.83	□□□□□ -0.2
IRF3-223	ENST00000599223	SARNP	P82979	210 aa	Known RBP	13.83	□□□□□ -0.2
IRF3-223	ENST00000599223	ADORA2A-AS1	P86434	159 aa		13.83	□□□□□ -0.2
IRF3-223	ENST00000599223	RHAG	Q02094	409 aa		13.83	□□□□□ -0.2
IRF3-223	ENST00000599223	ART3	Q13508	389 aa		13.83	□□□□□ -0.2
IRF3-223	ENST00000599223	TUBA3C	Q13748	450 aa		13.83	□□□□□ -0.2
IRF3-223	ENST00000599223	LONRF1	Q17RB8	773 aa		13.83	□□□□□ -0.2
IRF3-223	ENST00000599223	HSP90AA5P	Q58FG0	334 aa		13.83	□□□□□ -0.2
IRF3-223	ENST00000599223	ZNF766	Q5HY98	468 aa		13.83	□□□□□ -0.2
IRF3-223	ENST00000599223	ACER2	Q5QJU3	275 aa		13.83	□□□□□ -0.2
IRF3-223	ENST00000599223	TEX35	Q5T0J7	233 aa		13.83	□□□□□ -0.2
IRF3-223	ENST00000599223	RBM20	Q5T481	1227 aa	Known RBP	13.83	□□□□□ -0.2
IRF3-223	ENST00000599223	H3F3C	Q6NXT2	135 aa		13.83	□□□□□ -0.2
IRF3-223	ENST00000599223	TUBA3E	Q6PEY2	450 aa		13.83	□□□□□ -0.2
IRF3-223	ENST00000599223	MRGPRG	Q86SM5	289 aa		13.83	□□□□□ -0.2
IRF3-223	ENST00000599223	OR5T3	Q8NGG3	340 aa		13.83	□□□□□ -0.2
IRF3-223	ENST00000599223	METTL21A	Q8WXB1	218 aa		13.83	□□□□□ -0.2
IRF3-223	ENST00000599223	MOCOS	Q96EN8	888 aa		13.83	□□□□□ -0.2
IRF3-223	ENST00000599223	SIGLEC10	Q96LC7	697 aa		13.83	□□□□□ -0.2
IRF3-223	ENST00000599223	ATG10	Q9H0Y0	220 aa		13.83	□□□□□ -0.2
IRF3-223	ENST00000599223	LANCL2	Q9NS86	450 aa		13.83	□□□□□ -0.2
IRF3-223	ENST00000599223	SLC17A6	Q9P2U8	582 aa		13.83	□□□□□ -0.2
IRF3-223	ENST00000599223	TINAG	Q9UJW2	476 aa		13.83	□□□□□ -0.2
IRF3-223	ENST00000599223	MAD1L1	Q9Y6D9	718 aa		13.83	□□□□□ -0.2
IRF3-223	ENST00000599223	GTF3C1	Q12789	2109 aa		13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	ANKRD17	O75179	2603 aa	Known RBP	13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	CCDC168	Q8NDH2	2452 aa		13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	GOLGA6L10	A0A0M3HER8	536 aa		13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	ZNHIT1	O43257	154 aa		13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	SLC19A2	O60779	497 aa		13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	DNAJB6	O75190	326 aa		13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	B3GALT4	O96024	378 aa		13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	TUBB	P07437	444 aa		13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	CYC1	P08574	325 aa		13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	ICAM2	P13598	275 aa		13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	POU3F2	P20265	443 aa	Predicted RBP	13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	GABRB3	P28472	473 aa		13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	CDKN2D	P55273	166 aa		13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	MEF2A	Q02078	507 aa	Predicted RBP	13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	PTK6	Q13882	451 aa		13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	ABRAXAS2	Q15018	415 aa		13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	C3AR1	Q16581	482 aa		13.82	□□□□□ -0.2
IRF3-223	ENST00000599223	AGTRAP	Q6RW13	159 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms