RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 CLEC18CQ8NCF0 446 aa13.05□□□□□ -0.32
SCAF1-203ENST00000598359 GALNT11Q8NCW6 608 aa13.05□□□□□ -0.32
SCAF1-203ENST00000598359 ZCCHC10Q8TBK6 192 aa13.05□□□□□ -0.32
SCAF1-203ENST00000598359 FAM45AQ8TCE6 357 aa13.05□□□□□ -0.32
SCAF1-203ENST00000598359 NACC2Q96BF6 587 aa13.05□□□□□ -0.32
SCAF1-203ENST00000598359 SNRNP40Q96DI7 357 aaKnown RBP13.05□□□□□ -0.32
SCAF1-203ENST00000598359 PKNOX2Q96KN3 472 aa13.05□□□□□ -0.32
SCAF1-203ENST00000598359 OR4K3Q96R72 315 aa13.05□□□□□ -0.32
SCAF1-203ENST00000598359 SH3GL2Q99962 352 aa13.05□□□□□ -0.32
SCAF1-203ENST00000598359 SGPP1Q9BX95 441 aa13.05□□□□□ -0.32
SCAF1-203ENST00000598359 ILKAPQ9H0C8 392 aaPredicted RBP13.05□□□□□ -0.32
SCAF1-203ENST00000598359 SMYD2Q9NRG4 433 aa13.05□□□□□ -0.32
SCAF1-203ENST00000598359 HCN3Q9P1Z3 774 aa13.05□□□□□ -0.32
SCAF1-203ENST00000598359 SHANK1Q9Y566 2161 aa13.04□□□□□ -0.32
SCAF1-203ENST00000598359 FAM95CA0A1B0GW59 222 aa13.04□□□□□ -0.32
SCAF1-203ENST00000598359 NPEPPSL1A6NEC2 478 aa13.04□□□□□ -0.32
SCAF1-203ENST00000598359 OR2W5A6NFC9 320 aa13.04□□□□□ -0.32
SCAF1-203ENST00000598359 TCP11X1B4DZS4 312 aa13.04□□□□□ -0.32
SCAF1-203ENST00000598359 E7ESA3 106 aa13.04□□□□□ -0.32
SCAF1-203ENST00000598359 HIST1H2AGP0C0S8 130 aaPredicted RBP13.04□□□□□ -0.32
SCAF1-203ENST00000598359 COX6A1P12074 109 aa13.04□□□□□ -0.32
SCAF1-203ENST00000598359 IL1RNP18510 177 aa13.04□□□□□ -0.32
SCAF1-203ENST00000598359 HIST1H2ADP20671 130 aa13.04□□□□□ -0.32
SCAF1-203ENST00000598359 RPS15AP62244 130 aaKnown RBP13.04□□□□□ -0.32
SCAF1-203ENST00000598359 TRADDQ15628 312 aa13.04□□□□□ -0.32
SCAF1-203ENST00000598359 LCTLQ6UWM7 567 aa13.04□□□□□ -0.32
SCAF1-203ENST00000598359 IGFL3Q6UXB1 125 aa13.04□□□□□ -0.32
SCAF1-203ENST00000598359 SLC26A11Q86WA9 606 aa13.04□□□□□ -0.32
SCAF1-203ENST00000598359 ZC3HC1Q86WB0 502 aaKnown RBP13.04□□□□□ -0.32
SCAF1-203ENST00000598359 IQCKQ8N0W5 287 aa13.04□□□□□ -0.32
SCAF1-203ENST00000598359 KCT2Q8NC54 265 aa13.04□□□□□ -0.32
SCAF1-203ENST00000598359 ZNF740Q8NDX6 193 aa13.04□□□□□ -0.32
SCAF1-203ENST00000598359 IFT81Q8WYA0 676 aa13.04□□□□□ -0.32
SCAF1-203ENST00000598359 MOCOSQ96EN8 888 aa13.04□□□□□ -0.32
SCAF1-203ENST00000598359 MVB12AQ96EY5 273 aa13.04□□□□□ -0.32
SCAF1-203ENST00000598359 HIST1H2AHQ96KK5 128 aa13.04□□□□□ -0.32
SCAF1-203ENST00000598359 TSNARE1Q96NA8 513 aa13.04□□□□□ -0.32
SCAF1-203ENST00000598359 HIST1H2AJQ99878 128 aa13.04□□□□□ -0.32
SCAF1-203ENST00000598359 H2AFJQ9BTM1 129 aa13.04□□□□□ -0.32
SCAF1-203ENST00000598359 UNKQ9C0B0 810 aaKnown RBP13.04□□□□□ -0.32
SCAF1-203ENST00000598359 LHPPQ9H008 270 aa13.04□□□□□ -0.32
SCAF1-203ENST00000598359 PCBD2Q9H0N5 130 aa13.04□□□□□ -0.32
SCAF1-203ENST00000598359 ZDHHC18Q9NUE0 388 aa13.04□□□□□ -0.32
SCAF1-203ENST00000598359 ASF1BQ9NVP2 202 aa13.04□□□□□ -0.32
SCAF1-203ENST00000598359 MOCS1Q9NZB8 636 aa13.04□□□□□ -0.32
SCAF1-203ENST00000598359 MKL2Q9ULH7 1088 aa13.04□□□□□ -0.32
SCAF1-203ENST00000598359 CORO1CQ9ULV4 474 aaPredicted RBP13.04□□□□□ -0.32
SCAF1-203ENST00000598359 NTNG1Q9Y2I2 539 aa13.04□□□□□ -0.32
SCAF1-203ENST00000598359 NSG1A0A0A6YYJ2 146 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 PABPN1LA6NDY0 278 aaKnown RBP13.03□□□□□ -0.32
SCAF1-203ENST00000598359 CXorf49A8MYA2 514 aaPredicted RBP13.03□□□□□ -0.32
SCAF1-203ENST00000598359 SGK494L7N484 410 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 TXNDC9O14530 226 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 PRPF4O43172 522 aaKnown RBP eCLIP13.03□□□□□ -0.322e-6■■■■■ 27.5
SCAF1-203ENST00000598359 IPO13O94829 963 aaKnown RBP13.03□□□□□ -0.32
SCAF1-203ENST00000598359 KLHL18O94889 574 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 B3GALT4O96024 378 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 HPP00738 406 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 HRH2P25021 359 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 AVPR1BP47901 424 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 GLRBP48167 497 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 TAS2R39P59534 338 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 FRG1Q14331 258 aaKnown RBP13.03□□□□□ -0.32
SCAF1-203ENST00000598359 NDUFA9Q16795 377 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 EIF2S3LQ2VIR3 472 aaKnown RBP13.03□□□□□ -0.32
SCAF1-203ENST00000598359 HSP90B2PQ58FF3 399 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 CATSPEREQ5SY80 951 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 MFSD4BQ5TF39 518 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 AGAP7PQ5VUJ5 663 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 IRAK1BP1Q5VVH5 260 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 CAPN13Q6MZZ7 669 aaPredicted RBP13.03□□□□□ -0.32
SCAF1-203ENST00000598359 SBSNQ6UWP8 590 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 LRIG3Q6UXM1 1119 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 Q6ZS92 163 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 PDSS2Q86YH6 399 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 CEP97Q8IW35 865 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 FAM26EQ8N5C1 309 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 OR56A3Q8NH54 315 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 ANKRD49Q8WVL7 239 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 TM9SF4Q92544 642 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 FBXL8Q96CD0 374 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 TM4SF19Q96DZ7 209 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 CNDP1Q96KN2 507 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 AGAP4Q96P64 663 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 TXLNGYQ9BZA5 131 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 SPNS1Q9H2V7 528 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 SAYSD1Q9NPB0 183 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 MKKSQ9NPJ1 570 aaPredicted RBP13.03□□□□□ -0.32
SCAF1-203ENST00000598359 C14orf105Q9NVL8 296 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 GRHL1Q9NZI5 618 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 CENPEQ02224 2701 aa13.03□□□□□ -0.32
SCAF1-203ENST00000598359 KCNE1BA0A087WTH5 132 aa13.02□□□□□ -0.33
SCAF1-203ENST00000598359 IGHV3-20A0A0C4DH32 117 aa13.02□□□□□ -0.33
SCAF1-203ENST00000598359 ZNF860A6NHJ4 632 aa13.02□□□□□ -0.33
SCAF1-203ENST00000598359 OR1F1O43749 312 aa13.02□□□□□ -0.33
SCAF1-203ENST00000598359 RDH16O75452 317 aa13.02□□□□□ -0.33
SCAF1-203ENST00000598359 BMP10O95393 424 aa13.02□□□□□ -0.33
SCAF1-203ENST00000598359 SERPIND1P05546 499 aa13.02□□□□□ -0.33
SCAF1-203ENST00000598359 ZNF37AP17032 561 aaPredicted RBP13.02□□□□□ -0.33
SCAF1-203ENST00000598359 CCND1P24385 295 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms