RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 E7EQ34 232 aa14.34□□□□□ -0.11
TRIM28-207ENST00000597136 CLGNO14967 610 aa14.34□□□□□ -0.11
TRIM28-207ENST00000597136 EDF1O60869 148 aaKnown RBP14.34□□□□□ -0.11
TRIM28-207ENST00000597136 SHOX2O60902 331 aaPredicted RBP14.34□□□□□ -0.11
TRIM28-207ENST00000597136 KIAA0754O94854 1291 aa14.34□□□□□ -0.11
TRIM28-207ENST00000597136 FKBP9O95302 570 aa14.34□□□□□ -0.11
TRIM28-207ENST00000597136 ESRRBO95718 433 aa14.34□□□□□ -0.11
TRIM28-207ENST00000597136 CASP2P42575 452 aa14.34□□□□□ -0.11
TRIM28-207ENST00000597136 CHIT1Q13231 466 aa14.34□□□□□ -0.11
TRIM28-207ENST00000597136 LETMD1Q6P1Q0 360 aa14.34□□□□□ -0.11
TRIM28-207ENST00000597136 SLCO4C1Q6ZQN7 724 aa14.34□□□□□ -0.11
TRIM28-207ENST00000597136 GPRIN3Q6ZVF9 776 aa14.34□□□□□ -0.11
TRIM28-207ENST00000597136 MILR1Q7Z6M3 343 aa14.34□□□□□ -0.11
TRIM28-207ENST00000597136 LRRC34Q8IZ02 419 aa14.34□□□□□ -0.11
TRIM28-207ENST00000597136 OR4N4Q8N0Y3 316 aa14.34□□□□□ -0.11
TRIM28-207ENST00000597136 ZNF781Q8N8C0 355 aa14.34□□□□□ -0.11
TRIM28-207ENST00000597136 SLC5A11Q8WWX8 675 aa14.34□□□□□ -0.11
TRIM28-207ENST00000597136 CHMP6Q96FZ7 201 aa14.34□□□□□ -0.11
TRIM28-207ENST00000597136 CDK15Q96Q40 435 aa14.34□□□□□ -0.11
TRIM28-207ENST00000597136 PLCD4Q9BRC7 762 aa14.34□□□□□ -0.11
TRIM28-207ENST00000597136 B3GNT4Q9C0J1 378 aa14.34□□□□□ -0.11
TRIM28-207ENST00000597136 AKIRIN1Q9H9L7 192 aaPredicted RBP14.34□□□□□ -0.11
TRIM28-207ENST00000597136 ZDHHC2Q9UIJ5 367 aa14.34□□□□□ -0.11
TRIM28-207ENST00000597136 KMT2BQ9UMN6 2715 aaPredicted RBP14.33□□□□□ -0.12
TRIM28-207ENST00000597136 HAT1O14929 419 aa14.33□□□□□ -0.12
TRIM28-207ENST00000597136 MAP3K7O43318 606 aa14.33□□□□□ -0.12
TRIM28-207ENST00000597136 WFS1O76024 890 aa14.33□□□□□ -0.12
TRIM28-207ENST00000597136 STK17BO94768 372 aa14.33□□□□□ -0.12
TRIM28-207ENST00000597136 CDH1P12830 882 aa14.33□□□□□ -0.12
TRIM28-207ENST00000597136 ARL1P40616 181 aaPredicted RBP14.33□□□□□ -0.12
TRIM28-207ENST00000597136 SEC24CP53992 1094 aa14.33□□□□□ -0.12
TRIM28-207ENST00000597136 CSNK1G2P78368 415 aa14.33□□□□□ -0.12
TRIM28-207ENST00000597136 ABATP80404 500 aa14.33□□□□□ -0.12
TRIM28-207ENST00000597136 MEF2AQ02078 507 aaPredicted RBP14.33□□□□□ -0.12
TRIM28-207ENST00000597136 IRF8Q02556 426 aa14.33□□□□□ -0.12
TRIM28-207ENST00000597136 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.33□□□□□ -0.12
TRIM28-207ENST00000597136 XKR6Q5GH73 641 aa14.33□□□□□ -0.12
TRIM28-207ENST00000597136 CATSPEREQ5SY80 951 aa14.33□□□□□ -0.12
TRIM28-207ENST00000597136 ATG9BQ674R7 924 aa14.33□□□□□ -0.12
TRIM28-207ENST00000597136 NXPE4Q6UWF7 544 aa14.33□□□□□ -0.12
TRIM28-207ENST00000597136 CRLF3Q8IUI8 442 aa14.33□□□□□ -0.12
TRIM28-207ENST00000597136 L3MBTL4Q8NA19 623 aa14.33□□□□□ -0.12
TRIM28-207ENST00000597136 OR4F6Q8NGB9 312 aa14.33□□□□□ -0.12
TRIM28-207ENST00000597136 SNIP1Q8TAD8 396 aaKnown RBP14.33□□□□□ -0.12
TRIM28-207ENST00000597136 TEFMQ96QE5 360 aaKnown RBP14.33□□□□□ -0.12
TRIM28-207ENST00000597136 ULBP3Q9BZM4 244 aa14.33□□□□□ -0.12
TRIM28-207ENST00000597136 ACTR8Q9H981 624 aa14.33□□□□□ -0.12
TRIM28-207ENST00000597136 FGFR1OP2Q9NVK5 253 aa14.33□□□□□ -0.12
TRIM28-207ENST00000597136 SERTAD3Q9UJW9 196 aa14.33□□□□□ -0.12
TRIM28-207ENST00000597136 ZMIZ1Q9ULJ6 1067 aa14.33□□□□□ -0.12
TRIM28-207ENST00000597136 SNX7Q9UNH6 387 aa14.33□□□□□ -0.12
TRIM28-207ENST00000597136 PLCL2Q9UPR0 1127 aa14.33□□□□□ -0.12
TRIM28-207ENST00000597136 RNF11Q9Y3C5 154 aa14.33□□□□□ -0.12
TRIM28-207ENST00000597136 DOCK10Q96BY6 2186 aa14.32□□□□□ -0.12
TRIM28-207ENST00000597136 GMNCA6NCL1 334 aa14.32□□□□□ -0.12
TRIM28-207ENST00000597136 LCMT2O60294 686 aaKnown RBP14.32□□□□□ -0.12
TRIM28-207ENST00000597136 UGDHO60701 494 aa14.32□□□□□ -0.12
TRIM28-207ENST00000597136 OR4F21O95013 312 aa14.32□□□□□ -0.12
TRIM28-207ENST00000597136 CCNDBP1O95273 360 aa14.32□□□□□ -0.12
TRIM28-207ENST00000597136 CLDN9O95484 217 aa14.32□□□□□ -0.12
TRIM28-207ENST00000597136 FGF4P08620 206 aa14.32□□□□□ -0.12
TRIM28-207ENST00000597136 MSL3P1P0C860 447 aa14.32□□□□□ -0.12
TRIM28-207ENST00000597136 C1GALT1C1LP0DN25 315 aa14.32□□□□□ -0.12
TRIM28-207ENST00000597136 EIF2S3P41091 472 aaKnown RBP14.32□□□□□ -0.12
TRIM28-207ENST00000597136 RPL14P50914 215 aaKnown RBP14.32□□□□□ -0.12
TRIM28-207ENST00000597136 ITGA1P56199 1179 aa14.32□□□□□ -0.12
TRIM28-207ENST00000597136 PCBP4P57723 403 aaKnown RBP14.32□□□□□ -0.12
TRIM28-207ENST00000597136 VSX2P58304 361 aaPredicted RBP14.32□□□□□ -0.12
TRIM28-207ENST00000597136 SRSF6Q13247 344 aaKnown RBP14.32□□□□□ -0.12
TRIM28-207ENST00000597136 DOC2AQ14183 400 aa14.32□□□□□ -0.12
TRIM28-207ENST00000597136 E2F2Q14209 437 aa14.32□□□□□ -0.12
TRIM28-207ENST00000597136 TBCCQ15814 346 aa14.32□□□□□ -0.12
TRIM28-207ENST00000597136 SH2D4BQ5SQS7 431 aa14.32□□□□□ -0.12
TRIM28-207ENST00000597136 LIPJQ5W064 366 aa14.32□□□□□ -0.12
TRIM28-207ENST00000597136 ADCK2Q7Z695 626 aa14.32□□□□□ -0.12
TRIM28-207ENST00000597136 TMPRSS11BQ86T26 416 aa14.32□□□□□ -0.12
TRIM28-207ENST00000597136 DTX1Q86Y01 620 aa14.32□□□□□ -0.12
TRIM28-207ENST00000597136 GALNT6Q8NCL4 622 aa14.32□□□□□ -0.12
TRIM28-207ENST00000597136 ABHD11Q8NFV4 315 aa14.32□□□□□ -0.12
TRIM28-207ENST00000597136 AGR3Q8TD06 166 aa14.32□□□□□ -0.12
TRIM28-207ENST00000597136 WDR34Q96EX3 536 aa14.32□□□□□ -0.12
TRIM28-207ENST00000597136 DCBLD2Q96PD2 775 aa14.32□□□□□ -0.12
TRIM28-207ENST00000597136 ZPBPQ9BS86 351 aa14.32□□□□□ -0.12
TRIM28-207ENST00000597136 SPNS1Q9H2V7 528 aa14.32□□□□□ -0.12
TRIM28-207ENST00000597136 EHD1Q9H4M9 534 aa14.32□□□□□ -0.12
TRIM28-207ENST00000597136 TMEM184CQ9NVA4 438 aa14.32□□□□□ -0.12
TRIM28-207ENST00000597136 PNPOQ9NVS9 261 aa14.32□□□□□ -0.12
TRIM28-207ENST00000597136 WDR70Q9NW82 654 aa14.32□□□□□ -0.12
TRIM28-207ENST00000597136 ACSL6Q9UKU0 697 aa14.32□□□□□ -0.12
TRIM28-207ENST00000597136 TRAF6Q9Y4K3 522 aa14.32□□□□□ -0.12
TRIM28-207ENST00000597136 TMEM184BQ9Y519 407 aaPredicted RBP14.32□□□□□ -0.12
TRIM28-207ENST00000597136 FEZF1A0PJY2 475 aa14.31□□□□□ -0.12
TRIM28-207ENST00000597136 TMEM233B4DJY2 109 aa14.31□□□□□ -0.12
TRIM28-207ENST00000597136 SCRG1O75711 98 aa14.31□□□□□ -0.12
TRIM28-207ENST00000597136 OR2B3O76000 313 aa14.31□□□□□ -0.12
TRIM28-207ENST00000597136 DLGAP3O95886 979 aa14.31□□□□□ -0.12
TRIM28-207ENST00000597136 STATHP02808 62 aa14.31□□□□□ -0.12
TRIM28-207ENST00000597136 ENO1P06733 434 aaKnown RBP14.31□□□□□ -0.12
TRIM28-207ENST00000597136 CD22P20273 847 aa14.31□□□□□ -0.12
TRIM28-207ENST00000597136 VARSP26640 1264 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms