RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 A0A087WV48 116 aa18.79■□□□□ 0.6
LSM4-203ENST00000593829 FKBP6O75344 327 aa18.79■□□□□ 0.6
LSM4-203ENST00000593829 TIAF1O95411 115 aa18.79■□□□□ 0.6
LSM4-203ENST00000593829 ANPEPP15144 967 aa18.79■□□□□ 0.6
LSM4-203ENST00000593829 TFEBP19484 476 aa18.79■□□□□ 0.6
LSM4-203ENST00000593829 MAGEA12P43365 314 aa18.79■□□□□ 0.6
LSM4-203ENST00000593829 HNMTP50135 292 aa18.79■□□□□ 0.6
LSM4-203ENST00000593829 ITGA1P56199 1179 aa18.79■□□□□ 0.6
LSM4-203ENST00000593829 ZXDCQ2QGD7 858 aaPredicted RBP18.79■□□□□ 0.6
LSM4-203ENST00000593829 ZC3H12BQ5HYM0 836 aaKnown RBP18.79■□□□□ 0.6
LSM4-203ENST00000593829 RNF220Q5VTB9 566 aa18.79■□□□□ 0.6
LSM4-203ENST00000593829 TMEM126BQ8IUX1 230 aa18.79■□□□□ 0.6
LSM4-203ENST00000593829 SCUBE1Q8IWY4 988 aa18.79■□□□□ 0.6
LSM4-203ENST00000593829 KBTBD2Q8IY47 623 aa18.79■□□□□ 0.6
LSM4-203ENST00000593829 CENPLQ8N0S6 344 aaPredicted RBP18.79■□□□□ 0.6
LSM4-203ENST00000593829 STAG3L4Q8TBR4 150 aa18.79■□□□□ 0.6
LSM4-203ENST00000593829 NXNL1Q96CM4 212 aa18.79■□□□□ 0.6
LSM4-203ENST00000593829 MTBPQ96DY7 904 aa18.79■□□□□ 0.6
LSM4-203ENST00000593829 RNF112Q9ULX5 631 aa18.79■□□□□ 0.6
LSM4-203ENST00000593829 ACACAQ13085 2346 aa18.79■□□□□ 0.6
LSM4-203ENST00000593829 HCRTR1O43613 425 aa18.78■□□□□ 0.6
LSM4-203ENST00000593829 SCRG1O75711 98 aa18.78■□□□□ 0.6
LSM4-203ENST00000593829 ZNF28P17035 718 aa18.78■□□□□ 0.6
LSM4-203ENST00000593829 AP2B1P63010 937 aa18.78■□□□□ 0.6
LSM4-203ENST00000593829 IRF9Q00978 393 aa18.78■□□□□ 0.6
LSM4-203ENST00000593829 CLN3Q13286 438 aa18.78■□□□□ 0.6
LSM4-203ENST00000593829 LCTLQ6UWM7 567 aa18.78■□□□□ 0.6
LSM4-203ENST00000593829 ISCA2Q86U28 154 aa18.78■□□□□ 0.6
LSM4-203ENST00000593829 MCATQ8IVS2 390 aaKnown RBP18.78■□□□□ 0.6
LSM4-203ENST00000593829 GPR135Q8IZ08 494 aa18.78■□□□□ 0.6
LSM4-203ENST00000593829 KCTD4Q8WVF5 259 aa18.78■□□□□ 0.6
LSM4-203ENST00000593829 PYCR2Q96C36 320 aa18.78■□□□□ 0.6
LSM4-203ENST00000593829 IQCGQ9H095 443 aaKnown RBP18.78■□□□□ 0.6
LSM4-203ENST00000593829 ALG9Q9H6U8 611 aa18.78■□□□□ 0.6
LSM4-203ENST00000593829 SNX7Q9UNH6 387 aa18.78■□□□□ 0.6
LSM4-203ENST00000593829 SNRNP200O75643 2136 aaKnown RBP18.78■□□□□ 0.6
LSM4-203ENST00000593829 IGKV1-8A0A0C4DH67 115 aa18.78■□□□□ 0.6
LSM4-203ENST00000593829 OR2A25A4D2G3 310 aa18.78■□□□□ 0.6
LSM4-203ENST00000593829 BIRC5O15392 142 aa18.78■□□□□ 0.6
LSM4-203ENST00000593829 KLK10O43240 276 aa18.78■□□□□ 0.6
LSM4-203ENST00000593829 KLHL2O95198 593 aa18.78■□□□□ 0.6
LSM4-203ENST00000593829 DLGAP3O95886 979 aa18.78■□□□□ 0.6
LSM4-203ENST00000593829 PIM1P11309 404 aaPredicted RBP18.78■□□□□ 0.6
LSM4-203ENST00000593829 DYNC1I2Q13409 638 aaKnown RBP18.78■□□□□ 0.6
LSM4-203ENST00000593829 TGIF1Q15583 401 aa18.78■□□□□ 0.6
LSM4-203ENST00000593829 CDKL4Q5MAI5 379 aa18.78■□□□□ 0.6
LSM4-203ENST00000593829 FOXB2Q5VYV0 432 aa18.78■□□□□ 0.6
LSM4-203ENST00000593829 TREML1Q86YW5 311 aa18.78■□□□□ 0.6
LSM4-203ENST00000593829 SPACA3Q8IXA5 215 aa18.78■□□□□ 0.6
LSM4-203ENST00000593829 NLGN4XQ8N0W4 816 aa18.78■□□□□ 0.6
LSM4-203ENST00000593829 RBM15BQ8NDT2 890 aaKnown RBP18.78■□□□□ 0.6
LSM4-203ENST00000593829 NLGN4YQ8NFZ3 816 aaPredicted RBP18.78■□□□□ 0.6
LSM4-203ENST00000593829 RHBDF1Q96CC6 855 aa18.78■□□□□ 0.6
LSM4-203ENST00000593829 HAUS8Q9BT25 410 aa18.78■□□□□ 0.6
LSM4-203ENST00000593829 CCDC106Q9BWC9 280 aa18.78■□□□□ 0.6
LSM4-203ENST00000593829 PCDHB3Q9Y5E6 796 aa18.78■□□□□ 0.6
LSM4-203ENST00000593829 MAP1BP46821 2468 aaKnown RBP18.77■□□□□ 0.6
LSM4-203ENST00000593829 NCF1BA6NI72 391 aaPredicted RBP18.77■□□□□ 0.6
LSM4-203ENST00000593829 NCF1CA8MVU1 366 aaPredicted RBP18.77■□□□□ 0.6
LSM4-203ENST00000593829 E7EQ34 232 aa18.77■□□□□ 0.6
LSM4-203ENST00000593829 RAD1O60671 282 aa18.77■□□□□ 0.6
LSM4-203ENST00000593829 CTSVO60911 334 aa18.77■□□□□ 0.6
LSM4-203ENST00000593829 SNNO75324 88 aaPredicted RBP18.77■□□□□ 0.6
LSM4-203ENST00000593829 OR2B3O76000 313 aa18.77■□□□□ 0.6
LSM4-203ENST00000593829 NCF1P14598 390 aaPredicted RBP18.77■□□□□ 0.6
LSM4-203ENST00000593829 HRH2P25021 359 aa18.77■□□□□ 0.6
LSM4-203ENST00000593829 MAP7Q14244 749 aa18.77■□□□□ 0.6
LSM4-203ENST00000593829 ACAP2Q15057 778 aa18.77■□□□□ 0.6
LSM4-203ENST00000593829 ZNF425Q6IV72 752 aa18.77■□□□□ 0.6
LSM4-203ENST00000593829 C6orf15Q6UXA7 325 aaPredicted RBP18.77■□□□□ 0.6
LSM4-203ENST00000593829 TIPARPQ7Z3E1 657 aaKnown RBP18.77■□□□□ 0.6
LSM4-203ENST00000593829 PAQR7Q86WK9 346 aa18.77■□□□□ 0.6
LSM4-203ENST00000593829 C17orf64Q86WR6 236 aa18.77■□□□□ 0.6
LSM4-203ENST00000593829 TCAIMQ8N3R3 496 aa18.77■□□□□ 0.6
LSM4-203ENST00000593829 NKD1Q969G9 470 aa18.77■□□□□ 0.6
LSM4-203ENST00000593829 RNF31Q96EP0 1072 aa18.77■□□□□ 0.6
LSM4-203ENST00000593829 WDR70Q9NW82 654 aa18.77■□□□□ 0.6
LSM4-203ENST00000593829 PCM1Q15154 2024 aa18.77■□□□□ 0.59
LSM4-203ENST00000593829 SDK2Q58EX2 2172 aa18.76■□□□□ 0.59
LSM4-203ENST00000593829 URB1O60287 2271 aaKnown RBP18.76■□□□□ 0.59
LSM4-203ENST00000593829 NRP2O60462 931 aa18.76■□□□□ 0.59
LSM4-203ENST00000593829 CPNE3O75131 537 aaKnown RBP18.76■□□□□ 0.59
LSM4-203ENST00000593829 NTRK1P04629 796 aa18.76■□□□□ 0.59
LSM4-203ENST00000593829 LYNP07948 512 aa18.76■□□□□ 0.59
LSM4-203ENST00000593829 SERPINA6P08185 405 aa18.76■□□□□ 0.59
LSM4-203ENST00000593829 NPPBP16860 134 aa18.76■□□□□ 0.59
LSM4-203ENST00000593829 BST1Q10588 318 aa18.76■□□□□ 0.59
LSM4-203ENST00000593829 PTCHD3Q3KNS1 767 aa18.76■□□□□ 0.59
LSM4-203ENST00000593829 KLC3Q6P597 504 aa18.76■□□□□ 0.59
LSM4-203ENST00000593829 RIPOR1Q6ZS17 1223 aa18.76■□□□□ 0.59
LSM4-203ENST00000593829 ADCK2Q7Z695 626 aa18.76■□□□□ 0.59
LSM4-203ENST00000593829 ULK2Q8IYT8 1036 aa18.76■□□□□ 0.59
LSM4-203ENST00000593829 ESX1Q8N693 406 aa18.76■□□□□ 0.59
LSM4-203ENST00000593829 GBP5Q96PP8 586 aa18.76■□□□□ 0.59
LSM4-203ENST00000593829 ECSITQ9BQ95 431 aa18.76■□□□□ 0.59
LSM4-203ENST00000593829 TRIM4Q9C037 500 aa18.76■□□□□ 0.59
LSM4-203ENST00000593829 SPRTNQ9H040 489 aaPredicted RBP18.76■□□□□ 0.59
LSM4-203ENST00000593829 TMEM184CQ9NVA4 438 aa18.76■□□□□ 0.59
LSM4-203ENST00000593829 CUEDC1Q9NWM3 386 aaPredicted RBP18.76■□□□□ 0.59
LSM4-203ENST00000593829 IRAK4Q9NWZ3 460 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms