RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 GPSM1Q86YR5 675 aa25.82■■□□□ 1.72
SMAD4-213ENST00000591914 ZC3H7AQ8IWR0 971 aaKnown RBP25.82■■□□□ 1.72
SMAD4-213ENST00000591914 TBC1D19Q8N5T2 526 aa25.82■■□□□ 1.72
SMAD4-213ENST00000591914 KIAA1191Q96A73 305 aa25.82■■□□□ 1.72
SMAD4-213ENST00000591914 TRIM44Q96DX7 344 aaPredicted RBP25.82■■□□□ 1.72
SMAD4-213ENST00000591914 VPS50Q96JG6 964 aa25.82■■□□□ 1.72
SMAD4-213ENST00000591914 MESP1Q9BRJ9 268 aa25.82■■□□□ 1.72
SMAD4-213ENST00000591914 C5AR2Q9P296 337 aa25.82■■□□□ 1.72
SMAD4-213ENST00000591914 SLC22A7Q9Y694 548 aa25.82■■□□□ 1.72
SMAD4-213ENST00000591914 NCF1BA6NI72 391 aaPredicted RBP25.81■■□□□ 1.72
SMAD4-213ENST00000591914 NCF1CA8MVU1 366 aaPredicted RBP25.81■■□□□ 1.72
SMAD4-213ENST00000591914 IDSB3KWA1 339 aa25.81■■□□□ 1.72
SMAD4-213ENST00000591914 NCF1P14598 390 aaPredicted RBP25.81■■□□□ 1.72
SMAD4-213ENST00000591914 IL1RNP18510 177 aa25.81■■□□□ 1.72
SMAD4-213ENST00000591914 CRABP2P29373 138 aa25.81■■□□□ 1.72
SMAD4-213ENST00000591914 ECHS1P30084 290 aa25.81■■□□□ 1.72
SMAD4-213ENST00000591914 PHBP35232 272 aa25.81■■□□□ 1.72
SMAD4-213ENST00000591914 GGT5P36269 586 aa25.81■■□□□ 1.72
SMAD4-213ENST00000591914 GDF5P43026 501 aa25.81■■□□□ 1.72
SMAD4-213ENST00000591914 SCTRP47872 440 aa25.81■■□□□ 1.72
SMAD4-213ENST00000591914 MAT1AQ00266 395 aaKnown RBP25.81■■□□□ 1.72
SMAD4-213ENST00000591914 PWP1Q13610 501 aa25.81■■□□□ 1.72
SMAD4-213ENST00000591914 UBAP2Q5T6F2 1119 aaKnown RBP25.81■■□□□ 1.72
SMAD4-213ENST00000591914 ATG9BQ674R7 924 aa25.81■■□□□ 1.72
SMAD4-213ENST00000591914 NXPE4Q6UWF7 544 aa25.81■■□□□ 1.72
SMAD4-213ENST00000591914 TMPRSS11BQ86T26 416 aa25.81■■□□□ 1.72
SMAD4-213ENST00000591914 TCAIMQ8N3R3 496 aa25.81■■□□□ 1.72
SMAD4-213ENST00000591914 MOCOSQ96EN8 888 aa25.81■■□□□ 1.72
SMAD4-213ENST00000591914 CYTH2Q99418 400 aa25.81■■□□□ 1.72
SMAD4-213ENST00000591914 ZFP69BQ9UJL9 534 aa25.81■■□□□ 1.72
SMAD4-213ENST00000591914 NDUFS4O43181 175 aa25.8■■□□□ 1.72
SMAD4-213ENST00000591914 KLHL41O60662 606 aa25.8■■□□□ 1.72
SMAD4-213ENST00000591914 ALOX12BO75342 701 aa25.8■■□□□ 1.72
SMAD4-213ENST00000591914 WDR47O94967 919 aa25.8■■□□□ 1.72
SMAD4-213ENST00000591914 WISP1O95388 367 aa25.8■■□□□ 1.72
SMAD4-213ENST00000591914 ACPPP15309 386 aa25.8■■□□□ 1.72
SMAD4-213ENST00000591914 AHRP35869 848 aa25.8■■□□□ 1.72
SMAD4-213ENST00000591914 GMPRP36959 345 aa25.8■■□□□ 1.72
SMAD4-213ENST00000591914 EMP2P54851 167 aa25.8■■□□□ 1.72
SMAD4-213ENST00000591914 RAPH1Q70E73 1250 aa25.8■■□□□ 1.72
SMAD4-213ENST00000591914 PDSS2Q86YH6 399 aa25.8■■□□□ 1.72
SMAD4-213ENST00000591914 ZCCHC10Q8TBK6 192 aa25.8■■□□□ 1.72
SMAD4-213ENST00000591914 IFT81Q8WYA0 676 aa25.8■■□□□ 1.72
SMAD4-213ENST00000591914 FMO2Q99518 471 aa25.8■■□□□ 1.72
SMAD4-213ENST00000591914 AIF1LQ9BQI0 150 aa25.8■■□□□ 1.72
SMAD4-213ENST00000591914 TMEM79Q9BSE2 394 aa25.8■■□□□ 1.72
SMAD4-213ENST00000591914 FUT8Q9BYC5 575 aa25.8■■□□□ 1.72
SMAD4-213ENST00000591914 ACSS3Q9H6R3 686 aa25.8■■□□□ 1.72
SMAD4-213ENST00000591914 ZNF552Q9H707 407 aaPredicted RBP25.8■■□□□ 1.72
SMAD4-213ENST00000591914 ANKHQ9HCJ1 492 aa25.8■■□□□ 1.72
SMAD4-213ENST00000591914 A0A1W2PQ72 361 aa25.79■■□□□ 1.72
SMAD4-213ENST00000591914 HMX2A2RU54 273 aa25.79■■□□□ 1.72
SMAD4-213ENST00000591914 TAPBPO15533 448 aa25.79■■□□□ 1.72
SMAD4-213ENST00000591914 DPM1O60762 260 aa25.79■■□□□ 1.72
SMAD4-213ENST00000591914 BMP10O95393 424 aa25.79■■□□□ 1.72
SMAD4-213ENST00000591914 ALPPP05187 535 aa25.79■■□□□ 1.72
SMAD4-213ENST00000591914 GNAZP19086 355 aa25.79■■□□□ 1.72
SMAD4-213ENST00000591914 CSRP3P50461 194 aa25.79■■□□□ 1.72
SMAD4-213ENST00000591914 DLG1Q12959 904 aa25.79■■□□□ 1.72
SMAD4-213ENST00000591914 NADK2Q4G0N4 442 aa25.79■■□□□ 1.72
SMAD4-213ENST00000591914 SULT1C3Q6IMI6 304 aa25.79■■□□□ 1.72
SMAD4-213ENST00000591914 AFAP1L2Q8N4X5 818 aa25.79■■□□□ 1.72
SMAD4-213ENST00000591914 ANKRD53Q8N9V6 530 aa25.79■■□□□ 1.72
SMAD4-213ENST00000591914 PDPRQ8NCN5 879 aa25.79■■□□□ 1.72
SMAD4-213ENST00000591914 NT5CQ8TCD5 201 aa25.79■■□□□ 1.72
SMAD4-213ENST00000591914 CDC42EP4Q9H3Q1 356 aaKnown RBP25.79■■□□□ 1.72
SMAD4-213ENST00000591914 CNOT10Q9H9A5 744 aaKnown RBP25.79■■□□□ 1.72
SMAD4-213ENST00000591914 UBR5O95071 2799 aaPredicted RBP25.78■■□□□ 1.72
SMAD4-213ENST00000591914 SGK494L7N484 410 aa25.78■■□□□ 1.72
SMAD4-213ENST00000591914 MAP2K7O14733 419 aa25.78■■□□□ 1.72
SMAD4-213ENST00000591914 PCDH17O14917 1159 aa25.78■■□□□ 1.72
SMAD4-213ENST00000591914 IPO13O94829 963 aaKnown RBP25.78■■□□□ 1.72
SMAD4-213ENST00000591914 HPP00738 406 aa25.78■■□□□ 1.72
SMAD4-213ENST00000591914 HEXBP07686 556 aa25.78■■□□□ 1.72
SMAD4-213ENST00000591914 ITGA3P26006 1051 aa25.78■■□□□ 1.72
SMAD4-213ENST00000591914 HERC3Q15034 1050 aa25.78■■□□□ 1.72
SMAD4-213ENST00000591914 SLCO4C1Q6ZQN7 724 aa25.78■■□□□ 1.72
SMAD4-213ENST00000591914 TBC1D1Q86TI0 1168 aaPredicted RBP25.78■■□□□ 1.72
SMAD4-213ENST00000591914 ISCA2Q86U28 154 aa25.78■■□□□ 1.72
SMAD4-213ENST00000591914 CEP112Q8N8E3 955 aa25.78■■□□□ 1.72
SMAD4-213ENST00000591914 C8orf44Q96CB5 159 aa25.78■■□□□ 1.72
SMAD4-213ENST00000591914 WWOXQ9NZC7 414 aa25.78■■□□□ 1.72
SMAD4-213ENST00000591914 RNF112Q9ULX5 631 aa25.78■■□□□ 1.72
SMAD4-213ENST00000591914 NAALAD2Q9Y3Q0 740 aa25.78■■□□□ 1.72
SMAD4-213ENST00000591914 KLHL18O94889 574 aa25.77■■□□□ 1.72
SMAD4-213ENST00000591914 VARSP26640 1264 aaKnown RBP25.77■■□□□ 1.72
SMAD4-213ENST00000591914 KCNC1P48547 511 aa25.77■■□□□ 1.72
SMAD4-213ENST00000591914 EFNA3P52797 238 aa25.77■■□□□ 1.72
SMAD4-213ENST00000591914 CDC16Q13042 620 aa25.77■■□□□ 1.72
SMAD4-213ENST00000591914 MROH9Q5TGP6 573 aa25.77■■□□□ 1.72
SMAD4-213ENST00000591914 IGFL3Q6UXB1 125 aa25.77■■□□□ 1.72
SMAD4-213ENST00000591914 CCDC91Q7Z6B0 441 aa25.77■■□□□ 1.72
SMAD4-213ENST00000591914 SHISA5Q8N114 240 aa25.77■■□□□ 1.72
SMAD4-213ENST00000591914 RBMXL3Q8N7X1 1067 aaKnown RBP25.77■■□□□ 1.72
SMAD4-213ENST00000591914 TRPV3Q8NET8 790 aa25.77■■□□□ 1.72
SMAD4-213ENST00000591914 OR51Q1Q8NH59 317 aa25.77■■□□□ 1.72
SMAD4-213ENST00000591914 STAG3L4Q8TBR4 150 aa25.77■■□□□ 1.72
SMAD4-213ENST00000591914 MRRFQ96E11 262 aaKnown RBP25.77■■□□□ 1.72
SMAD4-213ENST00000591914 ALG9Q9H6U8 611 aa25.77■■□□□ 1.72
SMAD4-213ENST00000591914 NMRAL1Q9HBL8 299 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms