RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 CYP4X1Q8N118 509 aa17.13■□□□□ 0.33
VAT1-208ENST00000590924 C2orf73Q8N5S3 287 aaPredicted RBP17.13■□□□□ 0.33
VAT1-208ENST00000590924 PKNOX2Q96KN3 472 aa17.13■□□□□ 0.33
VAT1-208ENST00000590924 ZNF285Q96NJ3 590 aa17.13■□□□□ 0.33
VAT1-208ENST00000590924 ZNF552Q9H707 407 aaPredicted RBP17.13■□□□□ 0.33
VAT1-208ENST00000590924 CUEDC1Q9NWM3 386 aaPredicted RBP17.13■□□□□ 0.33
VAT1-208ENST00000590924 STOX2Q9P2F5 926 aaPredicted RBP17.13■□□□□ 0.33
VAT1-208ENST00000590924 CIDEBQ9UHD4 219 aa17.13■□□□□ 0.33
VAT1-208ENST00000590924 DCDC2Q9UHG0 476 aa17.13■□□□□ 0.33
VAT1-208ENST00000590924 B3GNT3Q9Y2A9 372 aa17.13■□□□□ 0.33
VAT1-208ENST00000590924 UTP20O75691 2785 aaKnown RBP17.13■□□□□ 0.33
VAT1-208ENST00000590924 DIDO1Q9BTC0 2240 aaKnown RBP17.12■□□□□ 0.33
VAT1-208ENST00000590924 POLEQ07864 2286 aa17.12■□□□□ 0.33
VAT1-208ENST00000590924 SMIM23A6NLE4 172 aa17.12■□□□□ 0.33
VAT1-208ENST00000590924 SYCE1LA8MT33 242 aa17.12■□□□□ 0.33
VAT1-208ENST00000590924 AGPSO00116 658 aa17.12■□□□□ 0.33
VAT1-208ENST00000590924 DSCR3O14972 297 aa17.12■□□□□ 0.33
VAT1-208ENST00000590924 KERAO60938 352 aa17.12■□□□□ 0.33
VAT1-208ENST00000590924 ALBP02768 609 aa17.12■□□□□ 0.33
VAT1-208ENST00000590924 ATXN8OSP0DMR3 200 aa17.12■□□□□ 0.33
VAT1-208ENST00000590924 ITGAXP20702 1163 aa17.12■□□□□ 0.33
VAT1-208ENST00000590924 ALAS2P22557 587 aa17.12■□□□□ 0.33
VAT1-208ENST00000590924 IMPA1P29218 277 aa17.12■□□□□ 0.33
VAT1-208ENST00000590924 FOXL2P58012 376 aa17.12■□□□□ 0.33
VAT1-208ENST00000590924 ZNF844Q08AG5 666 aa17.12■□□□□ 0.33
VAT1-208ENST00000590924 OR4D1Q15615 310 aa17.12■□□□□ 0.33
VAT1-208ENST00000590924 SF1Q15637 639 aaKnown RBP17.12■□□□□ 0.33
VAT1-208ENST00000590924 TCTE1Q5JU00 501 aa17.12■□□□□ 0.33
VAT1-208ENST00000590924 AGTRAPQ6RW13 159 aa17.12■□□□□ 0.33
VAT1-208ENST00000590924 TTLL10Q6ZVT0 673 aa17.12■□□□□ 0.33
VAT1-208ENST00000590924 OVCH1Q7RTY7 1134 aa17.12■□□□□ 0.33
VAT1-208ENST00000590924 TMEM151BQ8IW70 566 aa17.12■□□□□ 0.33
VAT1-208ENST00000590924 LRRC56Q8IYG6 542 aaPredicted RBP17.12■□□□□ 0.33
VAT1-208ENST00000590924 TCAIMQ8N3R3 496 aa17.12■□□□□ 0.33
VAT1-208ENST00000590924 LMNTD1Q8N9Z9 388 aa17.12■□□□□ 0.33
VAT1-208ENST00000590924 SSC4DQ8WTU2 575 aa17.12■□□□□ 0.33
VAT1-208ENST00000590924 ZIM3Q96PE6 472 aa17.12■□□□□ 0.33
VAT1-208ENST00000590924 ATOH8Q96SQ7 321 aa17.12■□□□□ 0.33
VAT1-208ENST00000590924 PCBD2Q9H0N5 130 aa17.12■□□□□ 0.33
VAT1-208ENST00000590924 SLC26A1Q9H2B4 701 aa17.12■□□□□ 0.33
VAT1-208ENST00000590924 WDR54Q9H977 334 aa17.12■□□□□ 0.33
VAT1-208ENST00000590924 RNF112Q9ULX5 631 aa17.12■□□□□ 0.33
VAT1-208ENST00000590924 CACNA1DQ01668 2161 aa17.12■□□□□ 0.33
VAT1-208ENST00000590924 NBPF19A0A087WUL8 3843 aa17.11■□□□□ 0.33
VAT1-208ENST00000590924 A0A1W2PPM1 405 aa17.11■□□□□ 0.33
VAT1-208ENST00000590924 TARM1B6A8C7 271 aa17.11■□□□□ 0.33
VAT1-208ENST00000590924 PYGBP11216 843 aa17.11■□□□□ 0.33
VAT1-208ENST00000590924 PIM1P11309 404 aaPredicted RBP17.11■□□□□ 0.33
VAT1-208ENST00000590924 MMP11P24347 488 aa17.11■□□□□ 0.33
VAT1-208ENST00000590924 GGT5P36269 586 aa17.11■□□□□ 0.33
VAT1-208ENST00000590924 AIMP2Q13155 320 aaKnown RBP17.11■□□□□ 0.33
VAT1-208ENST00000590924 GRM7Q14831 915 aa17.11■□□□□ 0.33
VAT1-208ENST00000590924 NAA25Q14CX7 972 aa17.11■□□□□ 0.33
VAT1-208ENST00000590924 KRT71Q3SY84 523 aa17.11■□□□□ 0.33
VAT1-208ENST00000590924 PLEKHN1Q494U1 663 aaPredicted RBP17.11■□□□□ 0.33
VAT1-208ENST00000590924 SULT1C3Q6IMI6 304 aa17.11■□□□□ 0.33
VAT1-208ENST00000590924 COX15Q7KZN9 410 aa17.11■□□□□ 0.33
VAT1-208ENST00000590924 PLD6Q8N2A8 252 aaKnown RBP17.11■□□□□ 0.33
VAT1-208ENST00000590924 OR56A3Q8NH54 315 aa17.11■□□□□ 0.33
VAT1-208ENST00000590924 TM9SF4Q92544 642 aa17.11■□□□□ 0.33
VAT1-208ENST00000590924 ZUFSPQ96AP4 578 aa17.11■□□□□ 0.33
VAT1-208ENST00000590924 ALG9Q9H6U8 611 aa17.11■□□□□ 0.33
VAT1-208ENST00000590924 ATP13A2Q9NQ11 1180 aa17.11■□□□□ 0.33
VAT1-208ENST00000590924 CUTCQ9NTM9 273 aa17.11■□□□□ 0.33
VAT1-208ENST00000590924 TMCO1Q9UM00 188 aa17.11■□□□□ 0.33
VAT1-208ENST00000590924 KLK4Q9Y5K2 254 aa17.11■□□□□ 0.33
VAT1-208ENST00000590924 CPAMD8Q8IZJ3 1885 aa17.11■□□□□ 0.33
VAT1-208ENST00000590924 A0A1W2PPV9 198 aa17.1■□□□□ 0.33
VAT1-208ENST00000590924 FITM1A5D6W6 292 aa17.1■□□□□ 0.33
VAT1-208ENST00000590924 SEMA7AO75326 666 aa17.1■□□□□ 0.33
VAT1-208ENST00000590924 GUCA1CO95843 209 aa17.1■□□□□ 0.33
VAT1-208ENST00000590924 RPA3P35244 121 aaPredicted RBP17.1■□□□□ 0.33
VAT1-208ENST00000590924 GMPRP36959 345 aa17.1■□□□□ 0.33
VAT1-208ENST00000590924 GRIA3P42263 894 aa17.1■□□□□ 0.33
VAT1-208ENST00000590924 KCNC1P48547 511 aa17.1■□□□□ 0.33
VAT1-208ENST00000590924 CCT5P48643 541 aa17.1■□□□□ 0.33
VAT1-208ENST00000590924 SLC18A2Q05940 514 aa17.1■□□□□ 0.33
VAT1-208ENST00000590924 MRPL49Q13405 166 aaKnown RBP17.1■□□□□ 0.33
VAT1-208ENST00000590924 FASTKQ14296 549 aaKnown RBP17.1■□□□□ 0.33
VAT1-208ENST00000590924 CASP8Q14790 479 aa17.1■□□□□ 0.33
VAT1-208ENST00000590924 NKG7Q16617 165 aa17.1■□□□□ 0.33
VAT1-208ENST00000590924 TRABD2AQ86V40 505 aa17.1■□□□□ 0.33
VAT1-208ENST00000590924 KLHDC8AQ8IYD2 350 aa17.1■□□□□ 0.33
VAT1-208ENST00000590924 PDPRQ8NCN5 879 aa17.1■□□□□ 0.33
VAT1-208ENST00000590924 OR2A1Q8NGT9 310 aa17.1■□□□□ 0.33
VAT1-208ENST00000590924 RHBDF1Q96CC6 855 aa17.1■□□□□ 0.33
VAT1-208ENST00000590924 SNRNP40Q96DI7 357 aaKnown RBP17.1■□□□□ 0.33
VAT1-208ENST00000590924 SPSB2Q99619 263 aa17.1■□□□□ 0.33
VAT1-208ENST00000590924 EGFL8Q99944 293 aa17.1■□□□□ 0.33
VAT1-208ENST00000590924 MRPL57Q9BQC6 102 aaKnown RBP17.1■□□□□ 0.33
VAT1-208ENST00000590924 SELENOSQ9BQE4 189 aa17.1■□□□□ 0.33
VAT1-208ENST00000590924 SGPP1Q9BX95 441 aa17.1■□□□□ 0.33
VAT1-208ENST00000590924 UTP6Q9NYH9 597 aaKnown RBP17.1■□□□□ 0.33
VAT1-208ENST00000590924 NUDT4Q9NZJ9 180 aa17.1■□□□□ 0.33
VAT1-208ENST00000590924 SENP1Q9P0U3 644 aa17.1■□□□□ 0.33
VAT1-208ENST00000590924 MAP10Q9P2G4 905 aa17.1■□□□□ 0.33
VAT1-208ENST00000590924 PLEKHB1Q9UF11 243 aaPredicted RBP17.1■□□□□ 0.33
VAT1-208ENST00000590924 NXT1Q9UKK6 140 aaKnown RBP17.1■□□□□ 0.33
VAT1-208ENST00000590924 DOPEY1Q5JWR5 2465 aa17.1■□□□□ 0.33
VAT1-208ENST00000590924 KRT87PA6NCN2 255 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms