RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 FRG2BQ96QU4 278 aa11.02□□□□□ -0.64
SEH1L-208ENST00000590843 RAB9BQ9NP90 201 aa11.02□□□□□ -0.64
SEH1L-208ENST00000590843 TRPV5Q9NQA5 729 aa11.02□□□□□ -0.64
SEH1L-208ENST00000590843 POLR3HQ9Y535 204 aaPredicted RBP11.02□□□□□ -0.64
SEH1L-208ENST00000590843 ANKRD28O15084 1053 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 C1GALT1C1LP0DN25 315 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 CHRM1P11229 460 aaPredicted RBP11.02□□□□□ -0.65
SEH1L-208ENST00000590843 CYP4B1P13584 511 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 MTHFD2P13995 350 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 CCNA2P20248 432 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 ATP6V1B2P21281 511 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 WASHC2DQ5SRD0 308 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 DRICH1Q6PGQ1 229 aaPredicted RBP11.02□□□□□ -0.65
SEH1L-208ENST00000590843 PIGXQ8TBF5 258 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 MYH1P12882 1939 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 H7C0S8 307 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 HCRTO43612 131 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 RRP9O43818 475 aaKnown RBP11.02□□□□□ -0.65
SEH1L-208ENST00000590843 SMNDC1O75940 238 aaKnown RBP eCLIP11.02□□□□□ -0.65
SEH1L-208ENST00000590843 PRKCHP24723 683 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 MAN2A2P49641 1150 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 LIMK2P53671 638 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 JAM2P57087 298 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 CDC42P60953 191 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 CSNK2A1P68400 391 aaPredicted RBP11.02□□□□□ -0.65
SEH1L-208ENST00000590843 CLCQ05315 142 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 TRAF2Q12933 501 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 GFRALQ6UXV0 394 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 C11orf65Q8NCR3 313 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 IMP4Q96G21 291 aaKnown RBP11.02□□□□□ -0.65
SEH1L-208ENST00000590843 FGFBP2Q9BYJ0 223 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 IKZF4Q9H2S9 585 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 VIPAS39Q9H9C1 493 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 CLK4Q9HAZ1 481 aaKnown RBP11.02□□□□□ -0.65
SEH1L-208ENST00000590843 NINJ2Q9NZG7 142 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 PCDHGB1Q9Y5G3 927 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 TRAV17A0A0B4J275 112 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 BIRC5O15392 142 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 LRATO95237 230 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 POU3F2P20265 443 aaPredicted RBP11.02□□□□□ -0.65
SEH1L-208ENST00000590843 ZBTB6Q15916 424 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 MANEALQ5VSG8 457 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 DEF8Q6ZN54 512 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 RIPOR1Q6ZS17 1223 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 RASSF6Q6ZTQ3 369 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 OR13H1Q8NG92 308 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 APOBEC4Q8WW27 367 aaKnown RBP11.02□□□□□ -0.65
SEH1L-208ENST00000590843 MAGEB18Q96M61 343 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 APOL4Q9BPW4 351 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 C10orf88Q9H8K7 445 aa11.02□□□□□ -0.65
SEH1L-208ENST00000590843 FARSBQ9NSD9 589 aaKnown RBP11.02□□□□□ -0.65
SEH1L-208ENST00000590843 FARSAQ9Y285 508 aaKnown RBP11.02□□□□□ -0.65
SEH1L-208ENST00000590843 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.02□□□□□ -0.65
SEH1L-208ENST00000590843 LOC100653049A0A140TA62 436 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 A0A1W2PRG6 482 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 FCGR2AP12318 317 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 HSD3B1P14060 373 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 CHN1P15882 459 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 HSD3B2P26439 372 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 STC1P52823 247 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 ATXN1P54253 815 aaKnown RBP11.01□□□□□ -0.65
SEH1L-208ENST00000590843 HADHBP55084 474 aaKnown RBP11.01□□□□□ -0.65
SEH1L-208ENST00000590843 VLDLRP98155 873 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 DMPKQ09013 629 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 GRIK2Q13002 908 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 TSNQ15631 228 aaKnown RBP11.01□□□□□ -0.65
SEH1L-208ENST00000590843 TAZQ16635 292 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 ZNF311Q5JNZ3 666 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 TMPRSS12Q86WS5 348 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 OR14A16Q8NHC5 309 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 UTP15Q8TED0 518 aaKnown RBP11.01□□□□□ -0.65
SEH1L-208ENST00000590843 MRGPRX1Q96LB2 322 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 KATNBL1Q9H079 304 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 ZNF624Q9P2J8 865 aaPredicted RBP11.01□□□□□ -0.65
SEH1L-208ENST00000590843 MAGED1Q9Y5V3 778 aaPredicted RBP11.01□□□□□ -0.65
SEH1L-208ENST00000590843 DCDC2BA2VCK2 349 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 H7BY64 318 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 APOC1P02654 83 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 MMP2P08253 660 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 HLA-FP30511 346 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 GCH1P30793 250 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 PTSQ03393 145 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 KCTD8Q6ZWB6 473 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 SCD5Q86SK9 330 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 SLC25A36Q96CQ1 311 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 PRAP1Q96NZ9 151 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 P2RX2Q9UBL9 471 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 SMIM31A0A1B0GVY4 71 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 PLK4O00444 970 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 ZNF23P17027 643 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 PRPS1L1P21108 318 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 MPSTP25325 297 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 HSPA13P48723 471 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 ADPRHP54922 357 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 ZP2Q05996 745 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 HPS6Q86YV9 775 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 KYQ8NBH2 561 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 SHISA4Q96DD7 197 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 GPER1Q99527 375 aa11.01□□□□□ -0.65
SEH1L-208ENST00000590843 ACSS3Q9H6R3 686 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms