RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 LANCL3Q6ZV70 420 aa16.95■□□□□ 0.3
PRKCSH-211ENST00000590098 ASPGQ86U10 573 aa16.95■□□□□ 0.3
PRKCSH-211ENST00000590098 DNAJB8Q8NHS0 232 aa16.95■□□□□ 0.3
PRKCSH-211ENST00000590098 ZCCHC10Q8TBK6 192 aa16.95■□□□□ 0.3
PRKCSH-211ENST00000590098 ACTRT1Q8TDG2 376 aa16.95■□□□□ 0.3
PRKCSH-211ENST00000590098 SLC13A3Q8WWT9 602 aa16.95■□□□□ 0.3
PRKCSH-211ENST00000590098 TM4SF19Q96DZ7 209 aa16.95■□□□□ 0.3
PRKCSH-211ENST00000590098 LINGO1Q96FE5 620 aa16.95■□□□□ 0.3
PRKCSH-211ENST00000590098 OSBPL9Q96SU4 736 aa16.95■□□□□ 0.3
PRKCSH-211ENST00000590098 NAT9Q9BTE0 207 aa16.95■□□□□ 0.3
PRKCSH-211ENST00000590098 ASIC3Q9UHC3 531 aa16.95■□□□□ 0.3
PRKCSH-211ENST00000590098 CDH1P12830 882 aa16.94■□□□□ 0.3
PRKCSH-211ENST00000590098 TDGF1P3P51864 188 aa16.94■□□□□ 0.3
PRKCSH-211ENST00000590098 TIAL1Q01085 375 aaKnown RBP eCLIP16.94■□□□□ 0.3
PRKCSH-211ENST00000590098 DHX9Q08211 1270 aaKnown RBP16.94■□□□□ 0.3
PRKCSH-211ENST00000590098 SPANXN3Q5MJ09 141 aa16.94■□□□□ 0.3
PRKCSH-211ENST00000590098 LCTLQ6UWM7 567 aa16.94■□□□□ 0.3
PRKCSH-211ENST00000590098 TMEM207Q6UWW9 146 aa16.94■□□□□ 0.3
PRKCSH-211ENST00000590098 PCGF5Q86SE9 256 aa16.94■□□□□ 0.3
PRKCSH-211ENST00000590098 SLC26A11Q86WA9 606 aa16.94■□□□□ 0.3
PRKCSH-211ENST00000590098 SHISA5Q8N114 240 aa16.94■□□□□ 0.3
PRKCSH-211ENST00000590098 KCT2Q8NC54 265 aa16.94■□□□□ 0.3
PRKCSH-211ENST00000590098 ZNF354BQ96LW1 612 aa16.94■□□□□ 0.3
PRKCSH-211ENST00000590098 HAUS8Q9BT25 410 aa16.94■□□□□ 0.3
PRKCSH-211ENST00000590098 SGPP1Q9BX95 441 aa16.94■□□□□ 0.3
PRKCSH-211ENST00000590098 TRIM54Q9BYV2 358 aa16.94■□□□□ 0.3
PRKCSH-211ENST00000590098 ARL15Q9NXU5 204 aa16.94■□□□□ 0.3
PRKCSH-211ENST00000590098 ABI3Q9P2A4 366 aa16.94■□□□□ 0.3
PRKCSH-211ENST00000590098 SH2B3Q9UQQ2 575 aa16.94■□□□□ 0.3
PRKCSH-211ENST00000590098 ABCA12Q86UK0 2595 aa16.94■□□□□ 0.3
PRKCSH-211ENST00000590098 OR2W5A6NFC9 320 aa16.93■□□□□ 0.3
PRKCSH-211ENST00000590098 LCMT2O60294 686 aaKnown RBP16.93■□□□□ 0.3
PRKCSH-211ENST00000590098 RDH16O75452 317 aa16.93■□□□□ 0.3
PRKCSH-211ENST00000590098 IL10P22301 178 aa16.93■□□□□ 0.3
PRKCSH-211ENST00000590098 CDKN2DP55273 166 aa16.93■□□□□ 0.3
PRKCSH-211ENST00000590098 IL2P60568 153 aa16.93■□□□□ 0.3
PRKCSH-211ENST00000590098 ACTN3Q08043 901 aaPredicted RBP16.93■□□□□ 0.3
PRKCSH-211ENST00000590098 PDAP1Q13442 181 aaKnown RBP16.93■□□□□ 0.3
PRKCSH-211ENST00000590098 EXT1Q16394 746 aa16.93■□□□□ 0.3
PRKCSH-211ENST00000590098 ACER2Q5QJU3 275 aa16.93■□□□□ 0.3
PRKCSH-211ENST00000590098 KIAA0408Q6ZU52 694 aa16.93■□□□□ 0.3
PRKCSH-211ENST00000590098 ANKRD37Q7Z713 158 aa16.93■□□□□ 0.3
PRKCSH-211ENST00000590098 MFSD9Q8NBP5 474 aa16.93■□□□□ 0.3
PRKCSH-211ENST00000590098 RELTQ969Z4 430 aa16.93■□□□□ 0.3
PRKCSH-211ENST00000590098 KCNK13Q9HB14 408 aa16.93■□□□□ 0.3
PRKCSH-211ENST00000590098 PPANQ9NQ55 473 aaKnown RBP16.93■□□□□ 0.3
PRKCSH-211ENST00000590098 SEC14L3Q9UDX4 400 aa16.93■□□□□ 0.3
PRKCSH-211ENST00000590098 NAALAD2Q9Y3Q0 740 aa16.93■□□□□ 0.3
PRKCSH-211ENST00000590098 SLC22A7Q9Y694 548 aa16.93■□□□□ 0.3
PRKCSH-211ENST00000590098 ENO4A6NNW6 628 aa16.92■□□□□ 0.3
PRKCSH-211ENST00000590098 DNALI1O14645 258 aaPredicted RBP16.92■□□□□ 0.3
PRKCSH-211ENST00000590098 UNC5CO95185 931 aa16.92■□□□□ 0.3
PRKCSH-211ENST00000590098 AHSGP02765 367 aa16.92■□□□□ 0.3
PRKCSH-211ENST00000590098 NPPBP16860 134 aa16.92■□□□□ 0.3
PRKCSH-211ENST00000590098 GABRB3P28472 473 aa16.92■□□□□ 0.3
PRKCSH-211ENST00000590098 CCR8P51685 355 aa16.92■□□□□ 0.3
PRKCSH-211ENST00000590098 SRSF11Q05519 484 aaKnown RBP16.92■□□□□ 0.3
PRKCSH-211ENST00000590098 RBPJQ06330 500 aa16.92■□□□□ 0.3
PRKCSH-211ENST00000590098 HERC3Q15034 1050 aa16.92■□□□□ 0.3
PRKCSH-211ENST00000590098 NSDHLQ15738 373 aa16.92■□□□□ 0.3
PRKCSH-211ENST00000590098 PHKG1Q16816 387 aa16.92■□□□□ 0.3
PRKCSH-211ENST00000590098 BBS9Q3SYG4 887 aa16.92■□□□□ 0.3
PRKCSH-211ENST00000590098 RBM20Q5T481 1227 aaKnown RBP16.92■□□□□ 0.3
PRKCSH-211ENST00000590098 DUPD1Q68J44 220 aa16.92■□□□□ 0.3
PRKCSH-211ENST00000590098 PDSS2Q86YH6 399 aa16.92■□□□□ 0.3
PRKCSH-211ENST00000590098 SLC35F6Q8N357 371 aa16.92■□□□□ 0.3
PRKCSH-211ENST00000590098 TBC1D19Q8N5T2 526 aa16.92■□□□□ 0.3
PRKCSH-211ENST00000590098 M1APQ8TC57 530 aa16.92■□□□□ 0.3
PRKCSH-211ENST00000590098 CERS2Q96G23 380 aa16.92■□□□□ 0.3
PRKCSH-211ENST00000590098 COPG2Q9UBF2 871 aa16.92■□□□□ 0.3
PRKCSH-211ENST00000590098 SUCOQ9UBS9 1254 aaKnown RBP16.92■□□□□ 0.3
PRKCSH-211ENST00000590098 ENTPD4Q9Y227 616 aa16.92■□□□□ 0.3
PRKCSH-211ENST00000590098 TRGV8A0A0C4DH27 118 aa16.91■□□□□ 0.3
PRKCSH-211ENST00000590098 HNRNPRO43390 633 aaKnown RBP16.91■□□□□ 0.3
PRKCSH-211ENST00000590098 OR1F1O43749 312 aa16.91■□□□□ 0.3
PRKCSH-211ENST00000590098 BANF1O75531 89 aa16.91■□□□□ 0.3
PRKCSH-211ENST00000590098 MST1P26927 711 aa16.91■□□□□ 0.3
PRKCSH-211ENST00000590098 AP1S2P56377 157 aa16.91■□□□□ 0.3
PRKCSH-211ENST00000590098 SKP1P63208 163 aa16.91■□□□□ 0.3
PRKCSH-211ENST00000590098 ABRAXAS2Q15018 415 aa16.91■□□□□ 0.3
PRKCSH-211ENST00000590098 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.91■□□□□ 0.3
PRKCSH-211ENST00000590098 SFT2D3Q587I9 215 aa16.91■□□□□ 0.3
PRKCSH-211ENST00000590098 ZNF766Q5HY98 468 aa16.91■□□□□ 0.3
PRKCSH-211ENST00000590098 FCRLBQ6BAA4 426 aa16.91■□□□□ 0.3
PRKCSH-211ENST00000590098 H3F3CQ6NXT2 135 aa16.91■□□□□ 0.3
PRKCSH-211ENST00000590098 CNTN4Q8IWV2 1026 aa16.91■□□□□ 0.3
PRKCSH-211ENST00000590098 BEST3Q8N1M1 668 aa16.91■□□□□ 0.3
PRKCSH-211ENST00000590098 GPATCH11Q8N954 259 aa16.91■□□□□ 0.3
PRKCSH-211ENST00000590098 ABHD11Q8NFV4 315 aa16.91■□□□□ 0.3
PRKCSH-211ENST00000590098 ATL1Q8WXF7 558 aa16.91■□□□□ 0.3
PRKCSH-211ENST00000590098 PYCR2Q96C36 320 aa16.91■□□□□ 0.3
PRKCSH-211ENST00000590098 SNF8Q96H20 258 aa16.91■□□□□ 0.3
PRKCSH-211ENST00000590098 PEX11GQ96HA9 241 aa16.91■□□□□ 0.3
PRKCSH-211ENST00000590098 OR1F2PQ96R84 312 aa16.91■□□□□ 0.3
PRKCSH-211ENST00000590098 LPAR4Q99677 370 aa16.91■□□□□ 0.3
PRKCSH-211ENST00000590098 RBCK1Q9BYM8 510 aa16.91■□□□□ 0.3
PRKCSH-211ENST00000590098 APCP25054 2843 aa16.9■□□□□ 0.3
PRKCSH-211ENST00000590098 ARHGAP10A1A4S6 786 aa16.9■□□□□ 0.3
PRKCSH-211ENST00000590098 ZNF860A6NHJ4 632 aa16.9■□□□□ 0.3
PRKCSH-211ENST00000590098 PRSS44E7EML9 344 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms