RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 DNA2P51530 1060 aa3.05□□□□□ -1.92
SMAD4-207ENST00000589076 NR0B1P51843 470 aaKnown RBP3.05□□□□□ -1.92
SMAD4-207ENST00000589076 CETN1Q12798 172 aa3.05□□□□□ -1.92
SMAD4-207ENST00000589076 SGCGQ13326 291 aa3.05□□□□□ -1.92
SMAD4-207ENST00000589076 IQCCQ4KMZ1 466 aa3.05□□□□□ -1.92
SMAD4-207ENST00000589076 FAM46CQ5VWP2 391 aa3.05□□□□□ -1.92
SMAD4-207ENST00000589076 PRSS55Q6UWB4 352 aaPredicted RBP3.05□□□□□ -1.92
SMAD4-207ENST00000589076 NHLRC1Q6VVB1 395 aa3.05□□□□□ -1.92
SMAD4-207ENST00000589076 CPEB2Q7Z5Q1 589 aaKnown RBP3.05□□□□□ -1.92
SMAD4-207ENST00000589076 PIGWQ7Z7B1 504 aa3.05□□□□□ -1.92
SMAD4-207ENST00000589076 CROCCP3Q8IVE0 287 aa3.05□□□□□ -1.92
SMAD4-207ENST00000589076 CCDC170Q8IYT3 715 aa3.05□□□□□ -1.92
SMAD4-207ENST00000589076 GPC2Q8N158 579 aa3.05□□□□□ -1.92
SMAD4-207ENST00000589076 KLHDC1Q8N7A1 406 aa3.05□□□□□ -1.92
SMAD4-207ENST00000589076 GBP7Q8N8V2 638 aaPredicted RBP3.05□□□□□ -1.92
SMAD4-207ENST00000589076 SLC37A3Q8NCC5 494 aa3.05□□□□□ -1.92
SMAD4-207ENST00000589076 MSANTD4Q8NCY6 345 aa3.05□□□□□ -1.92
SMAD4-207ENST00000589076 OR10G8Q8NGN5 311 aa3.05□□□□□ -1.92
SMAD4-207ENST00000589076 OR2T11Q8NH01 316 aa3.05□□□□□ -1.92
SMAD4-207ENST00000589076 FAM76AQ8TAV0 307 aa3.05□□□□□ -1.92
SMAD4-207ENST00000589076 ARHGAP45Q92619 1136 aa3.05□□□□□ -1.92
SMAD4-207ENST00000589076 CCDC43Q96MW1 224 aaKnown RBP3.05□□□□□ -1.92
SMAD4-207ENST00000589076 LPAR4Q99677 370 aa3.05□□□□□ -1.92
SMAD4-207ENST00000589076 NKX3-1Q99801 234 aaPredicted RBP3.05□□□□□ -1.92
SMAD4-207ENST00000589076 C17orf62Q9BQA9 187 aa3.05□□□□□ -1.92
SMAD4-207ENST00000589076 NACAP1Q9BZK3 213 aa3.05□□□□□ -1.92
SMAD4-207ENST00000589076 THAP2Q9H0W7 228 aa3.05□□□□□ -1.92
SMAD4-207ENST00000589076 ATP13A3Q9H7F0 1226 aa3.05□□□□□ -1.92
SMAD4-207ENST00000589076 ZNF71Q9NQZ8 489 aaPredicted RBP3.05□□□□□ -1.92
SMAD4-207ENST00000589076 PHPT1Q9NRX4 125 aaPredicted RBP3.05□□□□□ -1.92
SMAD4-207ENST00000589076 PDRG1Q9NUG6 133 aa3.05□□□□□ -1.92
SMAD4-207ENST00000589076 INTS10Q9NVR2 710 aaKnown RBP3.05□□□□□ -1.92
SMAD4-207ENST00000589076 ELF5Q9UKW6 265 aaPredicted RBP3.05□□□□□ -1.92
SMAD4-207ENST00000589076 ITM2BQ9Y287 266 aa3.05□□□□□ -1.92
SMAD4-207ENST00000589076 C13orf42A0A1B0GVH6 325 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 SNURFLB1AK76 121 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 HHLA1C9JL84 531 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 CCL24O00175 119 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 CTDSPLO15194 276 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 SCO2O43819 266 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 CDC123O75794 336 aaPredicted RBP3.04□□□□□ -1.92
SMAD4-207ENST00000589076 GOSR1O95249 250 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 RAF1P04049 648 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 ATP1B1P05026 303 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 PATE4P0C8F1 98 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 SP9P0CG40 484 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 SLC2A2P11168 524 aaPredicted RBP3.04□□□□□ -1.92
SMAD4-207ENST00000589076 CEACAM1P13688 526 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 ATP6V1B1P15313 513 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 CEBPBP17676 345 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 ELAVL4P26378 380 aaKnown RBP3.04□□□□□ -1.92
SMAD4-207ENST00000589076 DUTP33316 252 aaKnown RBP3.04□□□□□ -1.92
SMAD4-207ENST00000589076 MAP2K2P36507 400 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 OR3A1P47881 315 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 OR3A3P47888 321 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 KHKP50053 298 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 CLDN17P56750 224 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 ARHGAP1Q07960 439 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 TRIM29Q14134 588 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 RCN2Q14257 317 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 PTPN14Q15678 1187 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 EXT1Q16394 746 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 ZNF674Q2M3X9 581 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 ZNF876PQ49A33 203 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 FFAR4Q5NUL3 377 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 ARHGAP11AQ6P4F7 1023 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 SLC25A47Q6Q0C1 308 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 FCRLAQ7L513 359 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 SNX32Q86XE0 403 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 TMEM178AQ8NBL3 297 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 GPRC5AQ8NFJ5 357 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 MRGPRDQ8TDS7 321 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 APOBEC4Q8WW27 367 aaKnown RBP3.04□□□□□ -1.92
SMAD4-207ENST00000589076 ZNF501Q96CX3 271 aaPredicted RBP3.04□□□□□ -1.92
SMAD4-207ENST00000589076 LGALS12Q96DT0 336 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 DCTN5Q9BTE1 182 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 UBXN6Q9BZV1 441 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 SLC7A10Q9NS82 523 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 IARS2Q9NSE4 1012 aaKnown RBP3.04□□□□□ -1.92
SMAD4-207ENST00000589076 CNIH4Q9P003 139 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 MTRRQ9UBK8 725 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 GPR132Q9UNW8 380 aa3.04□□□□□ -1.92
SMAD4-207ENST00000589076 PFASO15067 1338 aa3.03□□□□□ -1.92
SMAD4-207ENST00000589076 ACEP12821 1306 aa3.03□□□□□ -1.92
SMAD4-207ENST00000589076 NPHP3Q7Z494 1330 aa3.03□□□□□ -1.92
SMAD4-207ENST00000589076 A0A087WW49 117 aa3.03□□□□□ -1.92
SMAD4-207ENST00000589076 FPGTO14772 594 aa3.03□□□□□ -1.92
SMAD4-207ENST00000589076 TEX28O15482 410 aa3.03□□□□□ -1.92
SMAD4-207ENST00000589076 ATP9AO75110 1047 aa3.03□□□□□ -1.92
SMAD4-207ENST00000589076 SEC24AO95486 1093 aa3.03□□□□□ -1.92
SMAD4-207ENST00000589076 GNB3P16520 340 aa3.03□□□□□ -1.92
SMAD4-207ENST00000589076 GNB1P62873 340 aa3.03□□□□□ -1.92
SMAD4-207ENST00000589076 AKAP17AQ02040 695 aaKnown RBP3.03□□□□□ -1.92
SMAD4-207ENST00000589076 ABRQ12979 859 aa3.03□□□□□ -1.92
SMAD4-207ENST00000589076 ZNF74Q16587 644 aa3.03□□□□□ -1.92
SMAD4-207ENST00000589076 FGD3Q5JSP0 725 aa3.03□□□□□ -1.92
SMAD4-207ENST00000589076 LRRC38Q5VT99 294 aa3.03□□□□□ -1.92
SMAD4-207ENST00000589076 ARHGAP17Q68EM7 881 aa3.03□□□□□ -1.92
SMAD4-207ENST00000589076 ZNF770Q6IQ21 691 aaPredicted RBP3.03□□□□□ -1.92
SMAD4-207ENST00000589076 KLHL10Q6JEL2 608 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms