RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 TTI1O43156 1089 aa12.93□□□□□ -0.34
HDAC5-208ENST00000588419 SLC35G6P0C7Q6 338 aa12.93□□□□□ -0.34
HDAC5-208ENST00000588419 ESRRAP11474 423 aaPredicted RBP12.93□□□□□ -0.34
HDAC5-208ENST00000588419 MLNP12872 115 aa12.93□□□□□ -0.34
HDAC5-208ENST00000588419 GRK3P35626 688 aa12.93□□□□□ -0.34
HDAC5-208ENST00000588419 CA7P43166 264 aa12.93□□□□□ -0.34
HDAC5-208ENST00000588419 MAGEA6P43360 314 aa12.93□□□□□ -0.34
HDAC5-208ENST00000588419 RGS4P49798 205 aa12.93□□□□□ -0.34
HDAC5-208ENST00000588419 AGTR2P50052 363 aa12.93□□□□□ -0.34
HDAC5-208ENST00000588419 CSNK1G2P78368 415 aa12.93□□□□□ -0.34
HDAC5-208ENST00000588419 OLR1P78380 273 aa12.93□□□□□ -0.34
HDAC5-208ENST00000588419 ACTN3Q08043 901 aaPredicted RBP12.93□□□□□ -0.34
HDAC5-208ENST00000588419 NAE1Q13564 534 aa12.93□□□□□ -0.34
HDAC5-208ENST00000588419 PTK6Q13882 451 aa12.93□□□□□ -0.34
HDAC5-208ENST00000588419 ABRAXAS2Q15018 415 aa12.93□□□□□ -0.34
HDAC5-208ENST00000588419 SFT2D3Q587I9 215 aa12.93□□□□□ -0.34
HDAC5-208ENST00000588419 ACER2Q5QJU3 275 aa12.93□□□□□ -0.34
HDAC5-208ENST00000588419 PLAG1Q6DJT9 500 aa12.93□□□□□ -0.34
HDAC5-208ENST00000588419 TMEM214Q6NUQ4 689 aaKnown RBP12.93□□□□□ -0.34
HDAC5-208ENST00000588419 PAPD4Q6PIY7 484 aaKnown RBP12.93□□□□□ -0.34
HDAC5-208ENST00000588419 CCDC137Q6PK04 289 aaKnown RBP12.93□□□□□ -0.34
HDAC5-208ENST00000588419 AGTRAPQ6RW13 159 aa12.93□□□□□ -0.34
HDAC5-208ENST00000588419 SLC26A11Q86WA9 606 aa12.93□□□□□ -0.34
HDAC5-208ENST00000588419 AGGF1Q8N302 714 aaeCLIP12.93□□□□□ -0.34
HDAC5-208ENST00000588419 OR5T3Q8NGG3 340 aa12.93□□□□□ -0.34
HDAC5-208ENST00000588419 DNAJB8Q8NHS0 232 aa12.93□□□□□ -0.34
HDAC5-208ENST00000588419 EEF1AKMT1Q8WVE0 214 aa12.93□□□□□ -0.34
HDAC5-208ENST00000588419 SLC13A3Q8WWT9 602 aa12.93□□□□□ -0.34
HDAC5-208ENST00000588419 TSLPQ969D9 159 aa12.93□□□□□ -0.34
HDAC5-208ENST00000588419 LINGO1Q96FE5 620 aa12.93□□□□□ -0.34
HDAC5-208ENST00000588419 SIGLEC12Q96PQ1 595 aa12.93□□□□□ -0.34
HDAC5-208ENST00000588419 UTP23Q9BRU9 249 aaKnown RBP12.93□□□□□ -0.34
HDAC5-208ENST00000588419 TINAGQ9UJW2 476 aa12.93□□□□□ -0.34
HDAC5-208ENST00000588419 PDE10AQ9Y233 779 aa12.93□□□□□ -0.34
HDAC5-208ENST00000588419 COMMD10Q9Y6G5 202 aa12.93□□□□□ -0.34
HDAC5-208ENST00000588419 MAGEB16A2A368 324 aa12.92□□□□□ -0.34
HDAC5-208ENST00000588419 NDUFS4O43181 175 aa12.92□□□□□ -0.34
HDAC5-208ENST00000588419 MAN1A2O60476 641 aa12.92□□□□□ -0.34
HDAC5-208ENST00000588419 SLC19A2O60779 497 aa12.92□□□□□ -0.34
HDAC5-208ENST00000588419 BANF1O75531 89 aa12.92□□□□□ -0.34
HDAC5-208ENST00000588419 C8GP07360 202 aa12.92□□□□□ -0.34
HDAC5-208ENST00000588419 COX6B1P14854 86 aa12.92□□□□□ -0.34
HDAC5-208ENST00000588419 HRH2P25021 359 aa12.92□□□□□ -0.34
HDAC5-208ENST00000588419 HTR1EP28566 365 aa12.92□□□□□ -0.34
HDAC5-208ENST00000588419 EEF1DP29692 281 aaKnown RBP12.92□□□□□ -0.34
HDAC5-208ENST00000588419 ALDH6A1Q02252 535 aaKnown RBP12.92□□□□□ -0.34
HDAC5-208ENST00000588419 RELAQ04206 551 aa12.92□□□□□ -0.34
HDAC5-208ENST00000588419 TUBA3CQ13748 450 aa12.92□□□□□ -0.34
HDAC5-208ENST00000588419 OR1C1Q15619 314 aa12.92□□□□□ -0.34
HDAC5-208ENST00000588419 C3AR1Q16581 482 aa12.92□□□□□ -0.34
HDAC5-208ENST00000588419 MEP1AQ16819 746 aa12.92□□□□□ -0.34
HDAC5-208ENST00000588419 RBM20Q5T481 1227 aaKnown RBP12.92□□□□□ -0.34
HDAC5-208ENST00000588419 CAPN13Q6MZZ7 669 aaPredicted RBP12.92□□□□□ -0.34
HDAC5-208ENST00000588419 UGT3A1Q6NUS8 523 aa12.92□□□□□ -0.34
HDAC5-208ENST00000588419 TUBA3EQ6PEY2 450 aa12.92□□□□□ -0.34
HDAC5-208ENST00000588419 PDSS2Q86YH6 399 aa12.92□□□□□ -0.34
HDAC5-208ENST00000588419 CYP4X1Q8N118 509 aa12.92□□□□□ -0.34
HDAC5-208ENST00000588419 ZNF808Q8N4W9 903 aaPredicted RBP12.92□□□□□ -0.34
HDAC5-208ENST00000588419 MCUQ8NE86 351 aa12.92□□□□□ -0.34
HDAC5-208ENST00000588419 PYCR2Q96C36 320 aa12.92□□□□□ -0.34
HDAC5-208ENST00000588419 PCBD2Q9H0N5 130 aa12.92□□□□□ -0.34
HDAC5-208ENST00000588419 KLHL42Q9P2K6 505 aa12.92□□□□□ -0.34
HDAC5-208ENST00000588419 SLC17A6Q9P2U8 582 aa12.92□□□□□ -0.34
HDAC5-208ENST00000588419 PKDREJQ9NTG1 2253 aa12.91□□□□□ -0.34
HDAC5-208ENST00000588419 GABRR3A8MPY1 467 aa12.91□□□□□ -0.34
HDAC5-208ENST00000588419 NPIPA5E9PKD4 350 aa12.91□□□□□ -0.34
HDAC5-208ENST00000588419 ZNHIT1O43257 154 aa12.91□□□□□ -0.34
HDAC5-208ENST00000588419 OR1F1O43749 312 aa12.91□□□□□ -0.34
HDAC5-208ENST00000588419 LCMT2O60294 686 aaKnown RBP12.91□□□□□ -0.34
HDAC5-208ENST00000588419 WISP2O76076 250 aa12.91□□□□□ -0.34
HDAC5-208ENST00000588419 B3GALT4O96024 378 aa12.91□□□□□ -0.34
HDAC5-208ENST00000588419 HIST1H2AGP0C0S8 130 aaPredicted RBP12.91□□□□□ -0.34
HDAC5-208ENST00000588419 HIST1H2ADP20671 130 aa12.91□□□□□ -0.34
HDAC5-208ENST00000588419 OR4D2P58180 307 aa12.91□□□□□ -0.34
HDAC5-208ENST00000588419 TAS2R50P59544 299 aa12.91□□□□□ -0.34
HDAC5-208ENST00000588419 ART3Q13508 389 aa12.91□□□□□ -0.34
HDAC5-208ENST00000588419 NSDHLQ15738 373 aa12.91□□□□□ -0.34
HDAC5-208ENST00000588419 EXT1Q16394 746 aa12.91□□□□□ -0.34
HDAC5-208ENST00000588419 ARMC3Q5W041 872 aa12.91□□□□□ -0.34
HDAC5-208ENST00000588419 SPINK14Q6IE38 97 aa12.91□□□□□ -0.34
HDAC5-208ENST00000588419 LRRC8EQ6NSJ5 796 aa12.91□□□□□ -0.34
HDAC5-208ENST00000588419 MTFR2Q6P444 385 aa12.91□□□□□ -0.34
HDAC5-208ENST00000588419 BNC2Q6ZN30 1099 aaPredicted RBP12.91□□□□□ -0.34
HDAC5-208ENST00000588419 NCCRP1Q6ZVX7 275 aaPredicted RBP12.91□□□□□ -0.34
HDAC5-208ENST00000588419 GDF7Q7Z4P5 450 aa12.91□□□□□ -0.34
HDAC5-208ENST00000588419 LMNTD2Q8IXW0 634 aa12.91□□□□□ -0.34
HDAC5-208ENST00000588419 THAP11Q96EK4 314 aa12.91□□□□□ -0.34
HDAC5-208ENST00000588419 HIST1H2AHQ96KK5 128 aa12.91□□□□□ -0.34
HDAC5-208ENST00000588419 LPAR4Q99677 370 aa12.91□□□□□ -0.34
HDAC5-208ENST00000588419 HIST1H2AJQ99878 128 aa12.91□□□□□ -0.34
HDAC5-208ENST00000588419 H2AFJQ9BTM1 129 aa12.91□□□□□ -0.34
HDAC5-208ENST00000588419 PARVBQ9HBI1 364 aa12.91□□□□□ -0.34
HDAC5-208ENST00000588419 TAS2R13Q9NYV9 303 aa12.91□□□□□ -0.34
HDAC5-208ENST00000588419 NPIPA1Q9UND3 350 aa12.91□□□□□ -0.34
HDAC5-208ENST00000588419 B4GALT2O60909 372 aa12.9□□□□□ -0.34
HDAC5-208ENST00000588419 GUCA1CO95843 209 aa12.9□□□□□ -0.34
HDAC5-208ENST00000588419 CD46P15529 392 aa12.9□□□□□ -0.34
HDAC5-208ENST00000588419 PGAM1P18669 254 aa12.9□□□□□ -0.34
HDAC5-208ENST00000588419 CCND1P24385 295 aa12.9□□□□□ -0.34
HDAC5-208ENST00000588419 ELAVL4P26378 380 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms