RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 PLD3Q8IV08 490 aa19.02■□□□□ 0.64
TRIM47-204ENST00000587339 FBXL6Q8N531 539 aa19.02■□□□□ 0.64
TRIM47-204ENST00000587339 OR7A2PQ8NGA2 310 aa19.02■□□□□ 0.64
TRIM47-204ENST00000587339 PATE1Q8WXA2 126 aa19.02■□□□□ 0.64
TRIM47-204ENST00000587339 SLC22A18Q96BI1 424 aa19.02■□□□□ 0.64
TRIM47-204ENST00000587339 ITCHQ96J02 903 aa19.02■□□□□ 0.64
TRIM47-204ENST00000587339 DPH7Q9BTV6 452 aa19.02■□□□□ 0.64
TRIM47-204ENST00000587339 MS4A8Q9BY19 250 aa19.02■□□□□ 0.64
TRIM47-204ENST00000587339 MIR1-1HGQ9H1L0 117 aa19.02■□□□□ 0.64
TRIM47-204ENST00000587339 SLC6A20Q9NP91 592 aa19.02■□□□□ 0.64
TRIM47-204ENST00000587339 POT1Q9NUX5 634 aa19.02■□□□□ 0.64
TRIM47-204ENST00000587339 TMEM184CQ9NVA4 438 aa19.02■□□□□ 0.64
TRIM47-204ENST00000587339 AHSPQ9NZD4 102 aa19.02■□□□□ 0.64
TRIM47-204ENST00000587339 VAPAQ9P0L0 249 aa19.02■□□□□ 0.64
TRIM47-204ENST00000587339 GMPR2Q9P2T1 348 aaKnown RBP19.02■□□□□ 0.64
TRIM47-204ENST00000587339 TRBC2A0A5B9 178 aa19.02■□□□□ 0.63
TRIM47-204ENST00000587339 OR5K4A6NMS3 321 aa19.02■□□□□ 0.63
TRIM47-204ENST00000587339 LCMT2O60294 686 aaKnown RBP19.02■□□□□ 0.63
TRIM47-204ENST00000587339 BAG2O95816 211 aa19.02■□□□□ 0.63
TRIM47-204ENST00000587339 TBX6O95947 436 aaPredicted RBP19.02■□□□□ 0.63
TRIM47-204ENST00000587339 WNT1P04628 370 aa19.02■□□□□ 0.63
TRIM47-204ENST00000587339 JUNDP17535 347 aa19.02■□□□□ 0.63
TRIM47-204ENST00000587339 PTDSS1P48651 473 aaKnown RBP19.02■□□□□ 0.63
TRIM47-204ENST00000587339 RACK1P63244 317 aaKnown RBP19.02■□□□□ 0.63
TRIM47-204ENST00000587339 LIPEQ05469 1076 aa19.02■□□□□ 0.63
TRIM47-204ENST00000587339 BNIP2Q12982 314 aa19.02■□□□□ 0.63
TRIM47-204ENST00000587339 C1orf61Q13536 156 aa19.02■□□□□ 0.63
TRIM47-204ENST00000587339 GPR18Q14330 331 aa19.02■□□□□ 0.63
TRIM47-204ENST00000587339 PRRT3Q5FWE3 981 aa19.02■□□□□ 0.63
TRIM47-204ENST00000587339 DEPDC1Q5TB30 811 aa19.02■□□□□ 0.63
TRIM47-204ENST00000587339 OR4F3Q6IEY1 312 aa19.02■□□□□ 0.63
TRIM47-204ENST00000587339 DNAJC14Q6Y2X3 702 aaPredicted RBP19.02■□□□□ 0.63
TRIM47-204ENST00000587339 MSANTD1Q6ZTZ1 278 aa19.02■□□□□ 0.63
TRIM47-204ENST00000587339 SLC9B2Q86UD5 537 aa19.02■□□□□ 0.63
TRIM47-204ENST00000587339 SPATA24Q86W54 205 aa19.02■□□□□ 0.63
TRIM47-204ENST00000587339 ANKRD46Q86W74 232 aa19.02■□□□□ 0.63
TRIM47-204ENST00000587339 ADGRF3Q8IZF5 1079 aa19.02■□□□□ 0.63
TRIM47-204ENST00000587339 TTLQ8NG68 377 aa19.02■□□□□ 0.63
TRIM47-204ENST00000587339 OR8J3Q8NGG0 315 aa19.02■□□□□ 0.63
TRIM47-204ENST00000587339 OR8J2Q8NGG1 315 aa19.02■□□□□ 0.63
TRIM47-204ENST00000587339 ZFPM2Q8WW38 1151 aa19.02■□□□□ 0.63
TRIM47-204ENST00000587339 HSPA12BQ96MM6 686 aa19.02■□□□□ 0.63
TRIM47-204ENST00000587339 ANKRD27Q96NW4 1050 aa19.02■□□□□ 0.63
TRIM47-204ENST00000587339 REXO4Q9GZR2 422 aaKnown RBP19.02■□□□□ 0.63
TRIM47-204ENST00000587339 KCNH6Q9H252 994 aa19.02■□□□□ 0.63
TRIM47-204ENST00000587339 CPNE7Q9UBL6 633 aa19.02■□□□□ 0.63
TRIM47-204ENST00000587339 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.02■□□□□ 0.63
TRIM47-204ENST00000587339 KIR2DS5A0A0G2JLQ3 304 aa19.01■□□□□ 0.63
TRIM47-204ENST00000587339 A0A0G2JNG1 304 aa19.01■□□□□ 0.63
TRIM47-204ENST00000587339 KIR2DS3K7RE56 304 aa19.01■□□□□ 0.63
TRIM47-204ENST00000587339 BTN3A3O00478 584 aa19.01■□□□□ 0.63
TRIM47-204ENST00000587339 SCAMP2O15127 329 aaKnown RBP19.01■□□□□ 0.63
TRIM47-204ENST00000587339 DFNA5O60443 496 aa19.01■□□□□ 0.63
TRIM47-204ENST00000587339 ERN1O75460 977 aaKnown RBP19.01■□□□□ 0.63
TRIM47-204ENST00000587339 SEMA3DO95025 777 aa19.01■□□□□ 0.63
TRIM47-204ENST00000587339 KLK1P06870 262 aa19.01■□□□□ 0.63
TRIM47-204ENST00000587339 HRH2P25021 359 aa19.01■□□□□ 0.63
TRIM47-204ENST00000587339 HPCAL1P37235 193 aa19.01■□□□□ 0.63
TRIM47-204ENST00000587339 GSK3BP49841 420 aa19.01■□□□□ 0.63
TRIM47-204ENST00000587339 EEFSECP57772 596 aaKnown RBP19.01■□□□□ 0.63
TRIM47-204ENST00000587339 MTPNP58546 118 aa19.01■□□□□ 0.63
TRIM47-204ENST00000587339 MRPS22P82650 360 aaKnown RBP19.01■□□□□ 0.63
TRIM47-204ENST00000587339 KIR2DS5Q14953 304 aa19.01■□□□□ 0.63
TRIM47-204ENST00000587339 SLC36A4Q6YBV0 504 aa19.01■□□□□ 0.63
TRIM47-204ENST00000587339 IQCHQ86VS3 1027 aa19.01■□□□□ 0.63
TRIM47-204ENST00000587339 IFNEQ86WN2 208 aa19.01■□□□□ 0.63
TRIM47-204ENST00000587339 DHFR2Q86XF0 187 aa19.01■□□□□ 0.63
TRIM47-204ENST00000587339 WDR48Q8TAF3 677 aa19.01■□□□□ 0.63
TRIM47-204ENST00000587339 PRPF18Q99633 342 aaKnown RBP19.01■□□□□ 0.63
TRIM47-204ENST00000587339 SERHLQ9NQF3 203 aa19.01■□□□□ 0.63
TRIM47-204ENST00000587339 MCM8Q9UJA3 840 aa19.01■□□□□ 0.63
TRIM47-204ENST00000587339 MAN2B2Q9Y2E5 1009 aa19.01■□□□□ 0.63
TRIM47-204ENST00000587339 FANCMQ8IYD8 2048 aa19.01■□□□□ 0.63
TRIM47-204ENST00000587339 A0A1W2PR77 199 aa19■□□□□ 0.63
TRIM47-204ENST00000587339 K7ESF4 209 aa19■□□□□ 0.63
TRIM47-204ENST00000587339 DNAJA2O60884 412 aa19■□□□□ 0.63
TRIM47-204ENST00000587339 KIAA1614Q5VZ46 1190 aa19■□□□□ 0.63
TRIM47-204ENST00000587339 NAGSQ8N159 534 aa19■□□□□ 0.63
TRIM47-204ENST00000587339 TMEM132CQ8N3T6 1108 aa19■□□□□ 0.63
TRIM47-204ENST00000587339 F2RL3Q96RI0 385 aa19■□□□□ 0.63
TRIM47-204ENST00000587339 KCTD14Q9BQ13 255 aaPredicted RBP19■□□□□ 0.63
TRIM47-204ENST00000587339 CENPKQ9BS16 269 aa19■□□□□ 0.63
TRIM47-204ENST00000587339 LRRC61Q9BV99 259 aa19■□□□□ 0.63
TRIM47-204ENST00000587339 NEUROG3Q9Y4Z2 214 aa19■□□□□ 0.63
TRIM47-204ENST00000587339 GABRR3A8MPY1 467 aa19■□□□□ 0.63
TRIM47-204ENST00000587339 PLPP1O14494 284 aa19■□□□□ 0.63
TRIM47-204ENST00000587339 RFXANKO14593 260 aa19■□□□□ 0.63
TRIM47-204ENST00000587339 ANP32DO95626 131 aa19■□□□□ 0.63
TRIM47-204ENST00000587339 KIR2DS3Q14952 304 aa19■□□□□ 0.63
TRIM47-204ENST00000587339 LRIF1Q5T3J3 769 aa19■□□□□ 0.63
TRIM47-204ENST00000587339 ANKRD26P1Q6NSI1 321 aa19■□□□□ 0.63
TRIM47-204ENST00000587339 ZFP1Q6P2D0 407 aa19■□□□□ 0.63
TRIM47-204ENST00000587339 CYP2R1Q6VVX0 501 aa19■□□□□ 0.63
TRIM47-204ENST00000587339 TBC1D19Q8N5T2 526 aa19■□□□□ 0.63
TRIM47-204ENST00000587339 PUM2Q8TB72 1066 aaKnown RBP eCLIP19■□□□□ 0.63
TRIM47-204ENST00000587339 SLC37A2Q8TED4 501 aa19■□□□□ 0.63
TRIM47-204ENST00000587339 RSRC1Q96IZ7 334 aaKnown RBP19■□□□□ 0.63
TRIM47-204ENST00000587339 LRGUKQ96M69 825 aa19■□□□□ 0.63
TRIM47-204ENST00000587339 SH3GL1Q99961 368 aa19■□□□□ 0.63
TRIM47-204ENST00000587339 PAIP1Q9H074 479 aaKnown RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms