RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 SCMH1Q96GD3 660 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 IMMP1LQ96LU5 166 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 ZNF354BQ96LW1 612 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 PWWP2AQ96N64 755 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 C19orf43Q9BQ61 176 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 REPIN1Q9BWE0 567 aaKnown RBP8.09□□□□□ -1.11
SDF2-204ENST00000587338 UCK2Q9BZX2 261 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 MKKSQ9NPJ1 570 aaPredicted RBP8.09□□□□□ -1.11
SDF2-204ENST00000587338 DLL4Q9NR61 685 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 NLE1Q9NVX2 485 aaPredicted RBP8.09□□□□□ -1.11
SDF2-204ENST00000587338 KCNN3Q9UGI6 736 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 CDC14AQ9UNH5 594 aa8.09□□□□□ -1.11
SDF2-204ENST00000587338 AAR2Q9Y312 384 aaKnown RBP8.09□□□□□ -1.11
SDF2-204ENST00000587338 NBEAL1Q6ZS30 2694 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.08□□□□□ -1.12
SDF2-204ENST00000587338 A0A0A6YYC8 382 aaPredicted RBP8.08□□□□□ -1.12
SDF2-204ENST00000587338 KRT87PA6NCN2 255 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 OR51F1A6NGY5 319 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 H7C0S8 307 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 I3L1I5 382 aaPredicted RBP8.08□□□□□ -1.12
SDF2-204ENST00000587338 FKBP9O95302 570 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 SP1P08047 785 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 MSX1P28360 303 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 ECHS1P30084 290 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 CHRNB4P30926 498 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 CCR7P32248 378 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 EFNA3P52797 238 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 SARNPP82979 210 aaKnown RBP8.08□□□□□ -1.12
SDF2-204ENST00000587338 LTBQ06643 244 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 TFF3Q07654 80 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 GRB7Q14451 532 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 ITIH4Q14624 930 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 POU6F1Q14863 301 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 MEP1AQ16819 746 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 PRTGQ2VWP7 1150 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 HP1BP3Q5SSJ5 553 aaPredicted RBP8.08□□□□□ -1.12
SDF2-204ENST00000587338 BEND6Q5SZJ8 279 aaPredicted RBP8.08□□□□□ -1.12
SDF2-204ENST00000587338 RNASEH2BQ5TBB1 312 aaKnown RBP8.08□□□□□ -1.12
SDF2-204ENST00000587338 DENND5AQ6IQ26 1287 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 TMEM205Q6UW68 189 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 PACS1Q6VY07 963 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 PPP1R21Q6ZMI0 780 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 LANCL3Q6ZV70 420 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 RNF44Q7L0R7 432 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 CD163Q86VB7 1156 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 CRLF3Q8IUI8 442 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 ZC3H7AQ8IWR0 971 aaKnown RBP8.08□□□□□ -1.12
SDF2-204ENST00000587338 MARVELD2Q8N4S9 558 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 CSNK1A1LQ8N752 337 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 AMER3Q8N944 861 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 EIF1ADQ8N9N8 165 aaKnown RBP8.08□□□□□ -1.12
SDF2-204ENST00000587338 OR2L3Q8NG85 312 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 AENQ8WTP8 325 aaKnown RBP8.08□□□□□ -1.12
SDF2-204ENST00000587338 ASB5Q8WWX0 329 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.08□□□□□ -1.12
SDF2-204ENST00000587338 NINJ1Q92982 152 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 ZBTB9Q96C00 473 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 MVB12AQ96EY5 273 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 ZFYVE21Q9BQ24 234 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 RAB11FIP5Q9BXF6 653 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 FAM129AQ9BZQ8 928 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 KCNK13Q9HB14 408 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 SAYSD1Q9NPB0 183 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 KCNJ16Q9NPI9 418 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 ZDHHC18Q9NUE0 388 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 DNAJB12Q9NXW2 375 aaKnown RBP8.08□□□□□ -1.12
SDF2-204ENST00000587338 GNPTGQ9UJJ9 305 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 RNF6Q9Y252 685 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 RPH3AQ9Y2J0 694 aaPredicted RBP8.08□□□□□ -1.12
SDF2-204ENST00000587338 ASB1Q9Y576 335 aa8.08□□□□□ -1.12
SDF2-204ENST00000587338 FN1P02751 2386 aaKnown RBP8.08□□□□□ -1.12
SDF2-204ENST00000587338 TLN2Q9Y4G6 2542 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 GABRR3A8MPY1 467 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 H0YGG7 62 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 SMAPO00193 183 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 PSMD3O43242 534 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 OR1I1O60431 355 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 MAN1A2O60476 641 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 VPS26AO75436 327 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 TOXO94900 526 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 SUN1O94901 812 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 HOXD4P09016 255 aaPredicted RBP8.07□□□□□ -1.12
SDF2-204ENST00000587338 FOSL1P15407 271 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 TPH1P17752 444 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 PTGS2P35354 604 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 SLC26A3P40879 764 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 BDKRB1P46663 353 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 ARL4CP56559 192 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 ARF3P61204 181 aaPredicted RBP8.07□□□□□ -1.12
SDF2-204ENST00000587338 MAT1AQ00266 395 aaKnown RBP8.07□□□□□ -1.12
SDF2-204ENST00000587338 PDIA2Q13087 525 aaKnown RBP8.07□□□□□ -1.12
SDF2-204ENST00000587338 KCNJ11Q14654 390 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 SLMAPQ14BN4 828 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 MAPKAPK3Q16644 382 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 HKDC1Q2TB90 917 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 BBS9Q3SYG4 887 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 MINDY4Q4G0A6 757 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 RNFT1Q5M7Z0 435 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 PLAG1Q6DJT9 500 aa8.07□□□□□ -1.12
SDF2-204ENST00000587338 TTC23LQ6PF05 361 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms