RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 ZNF473Q8WTR7 871 aaKnown RBP16.21■□□□□ 0.19
PRKCSH-203ENST00000586486 ZNF501Q96CX3 271 aaPredicted RBP16.21■□□□□ 0.19
PRKCSH-203ENST00000586486 SLCO1B3Q9NPD5 702 aa16.21■□□□□ 0.19
PRKCSH-203ENST00000586486 PSD3Q9NYI0 1048 aa16.21■□□□□ 0.19
PRKCSH-203ENST00000586486 TIMM22Q9Y584 194 aa16.21■□□□□ 0.19
PRKCSH-203ENST00000586486 LOC105369274A0A096LPK9 316 aa16.2■□□□□ 0.18
PRKCSH-203ENST00000586486 LOC102723532A0A0G2JNH3 316 aa16.2■□□□□ 0.18
PRKCSH-203ENST00000586486 SERTM1A2A2V5 107 aa16.2■□□□□ 0.18
PRKCSH-203ENST00000586486 TMEM233B4DJY2 109 aa16.2■□□□□ 0.18
PRKCSH-203ENST00000586486 TCP11X1B4DZS4 312 aa16.2■□□□□ 0.18
PRKCSH-203ENST00000586486 FOXE1O00358 373 aaPredicted RBP16.2■□□□□ 0.18
PRKCSH-203ENST00000586486 CHEK2O96017 543 aa16.2■□□□□ 0.18
PRKCSH-203ENST00000586486 SLC35G6P0C7Q6 338 aa16.2■□□□□ 0.18
PRKCSH-203ENST00000586486 PCNAP12004 261 aa16.2■□□□□ 0.18
PRKCSH-203ENST00000586486 HK2P52789 917 aa16.2■□□□□ 0.18
PRKCSH-203ENST00000586486 PHEXP78562 749 aa16.2■□□□□ 0.18
PRKCSH-203ENST00000586486 UGT3A2Q3SY77 523 aa16.2■□□□□ 0.18
PRKCSH-203ENST00000586486 TCTE1Q5JU00 501 aa16.2■□□□□ 0.18
PRKCSH-203ENST00000586486 TCHHL1Q5QJ38 904 aaPredicted RBP16.2■□□□□ 0.18
PRKCSH-203ENST00000586486 MANEAQ5SRI9 462 aa16.2■□□□□ 0.18
PRKCSH-203ENST00000586486 RAB11FIP2Q7L804 512 aa16.2■□□□□ 0.18
PRKCSH-203ENST00000586486 BPHLQ86WA6 291 aaPredicted RBP16.2■□□□□ 0.18
PRKCSH-203ENST00000586486 CRLF3Q8IUI8 442 aa16.2■□□□□ 0.18
PRKCSH-203ENST00000586486 OR4N4Q8N0Y3 316 aa16.2■□□□□ 0.18
PRKCSH-203ENST00000586486 AFAP1L2Q8N4X5 818 aa16.2■□□□□ 0.18
PRKCSH-203ENST00000586486 ZNF655Q8N720 491 aaPredicted RBP16.2■□□□□ 0.18
PRKCSH-203ENST00000586486 NT5CQ8TCD5 201 aa16.2■□□□□ 0.18
PRKCSH-203ENST00000586486 AGR3Q8TD06 166 aa16.2■□□□□ 0.18
PRKCSH-203ENST00000586486 FAR2Q96K12 515 aa16.2■□□□□ 0.18
PRKCSH-203ENST00000586486 BRF2Q9HAW0 419 aa16.2■□□□□ 0.18
PRKCSH-203ENST00000586486 DMRT3Q9NQL9 472 aa16.2■□□□□ 0.18
PRKCSH-203ENST00000586486 OCIAD1Q9NX40 245 aa16.2■□□□□ 0.18
PRKCSH-203ENST00000586486 LOXL2Q9Y4K0 774 aa16.2■□□□□ 0.18
PRKCSH-203ENST00000586486 DNAJC15Q9Y5T4 150 aa16.2■□□□□ 0.18
PRKCSH-203ENST00000586486 EFCAB7A8K855 629 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 TMEM150CB9EJG8 249 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 TXNDC9O14530 226 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 EDF1O60869 148 aaKnown RBP16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 ULK1O75385 1050 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 SERPINA6P08185 405 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 HSD3B1P14060 373 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 HSD3B2P26439 372 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 HTR6P50406 440 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 GYS2P54840 703 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 VSX2P58304 361 aaPredicted RBP16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 MC2RQ01718 297 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 TARDBPQ13148 414 aaKnown RBP eCLIP16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 IL11RAQ14626 422 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 CSNK1A1LQ8N752 337 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 CAMKVQ8NCB2 501 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 PIWIL2Q8TC59 973 aaKnown RBP16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 SLC13A3Q8WWT9 602 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 SELENOMQ8WWX9 145 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 N4BP2L2Q92802 583 aaPredicted RBP16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 OR6C1Q96RD1 312 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 FBXO8Q9NRD0 319 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 KIF26BQ2KJY2 2108 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 FITM1A5D6W6 292 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 SLCO1B7G3V0H7 640 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 POLR3GO15318 223 aaPredicted RBP16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 P2RX6O15547 441 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 NDUFS4O43181 175 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 TBX6O95947 436 aaPredicted RBP16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 PDYNP01213 254 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 FGF5P12034 268 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 EMP3P54852 163 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 ITGA1P56199 1179 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 CYP4F2P78329 520 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 CSTF3Q12996 717 aaKnown RBP16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 PRTGQ2VWP7 1150 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 ADPRMQ3LIE5 342 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 WASHC2DQ5SRD0 308 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 FAM219BQ5XKK7 198 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 FAM47EQ6ZV65 393 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 GBP7Q8N8V2 638 aaPredicted RBP16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 OR1L3Q8NH93 324 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 WDR36Q8NI36 951 aaKnown RBP16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 TWIST2Q8WVJ9 160 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 MTERF1Q99551 399 aaKnown RBP16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 CCT7Q99832 543 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 MS4A8Q9BY19 250 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 NLNQ9BYT8 704 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 SLC6A16Q9GZN6 736 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 FARSBQ9NSD9 589 aaKnown RBP16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 PNPOQ9NVS9 261 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 SERTAD3Q9UJW9 196 aa16.19■□□□□ 0.18
PRKCSH-203ENST00000586486 MAGEB17A8MXT2 336 aa16.18■□□□□ 0.18
PRKCSH-203ENST00000586486 PLD2O14939 933 aa16.18■□□□□ 0.18
PRKCSH-203ENST00000586486 ZSCAN9O15535 394 aaPredicted RBP16.18■□□□□ 0.18
PRKCSH-203ENST00000586486 HYAL3O43820 417 aaPredicted RBP16.18■□□□□ 0.18
PRKCSH-203ENST00000586486 OR2B3O76000 313 aa16.18■□□□□ 0.18
PRKCSH-203ENST00000586486 CCL4P13236 92 aa16.18■□□□□ 0.18
PRKCSH-203ENST00000586486 SERPINB3P29508 390 aa16.18■□□□□ 0.18
PRKCSH-203ENST00000586486 NEK2P51955 445 aa16.18■□□□□ 0.18
PRKCSH-203ENST00000586486 RAB15P59190 212 aa16.18■□□□□ 0.18
PRKCSH-203ENST00000586486 RGS1Q08116 209 aa16.18■□□□□ 0.18
PRKCSH-203ENST00000586486 HYAL2Q12891 473 aa16.18■□□□□ 0.18
PRKCSH-203ENST00000586486 DDX39BQ13838 428 aaKnown RBP16.18■□□□□ 0.18
PRKCSH-203ENST00000586486 ABRAXAS2Q15018 415 aa16.18■□□□□ 0.18
PRKCSH-203ENST00000586486 TLDC1Q6P9B6 456 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms