RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 MCCC2Q9HCC0 563 aa15.21■□□□□ 0.03
SREBF1-221ENST00000583080 BFARQ9NZS9 450 aa15.21■□□□□ 0.03
SREBF1-221ENST00000583080 MED16Q9Y2X0 877 aa15.21■□□□□ 0.03
SREBF1-221ENST00000583080 ZNF860A6NHJ4 632 aa15.2■□□□□ 0.02
SREBF1-221ENST00000583080 ZNF839A8K0R7 811 aa15.2■□□□□ 0.02
SREBF1-221ENST00000583080 E5RI56 91 aa15.2■□□□□ 0.02
SREBF1-221ENST00000583080 SP1P08047 785 aa15.2■□□□□ 0.02
SREBF1-221ENST00000583080 OGNP20774 298 aaKnown RBP15.2■□□□□ 0.02
SREBF1-221ENST00000583080 CAPN3P20807 821 aa15.2■□□□□ 0.02
SREBF1-221ENST00000583080 IMPA1P29218 277 aa15.2■□□□□ 0.02
SREBF1-221ENST00000583080 COILP38432 576 aaPredicted RBP15.2■□□□□ 0.02
SREBF1-221ENST00000583080 AGTR2P50052 363 aa15.2■□□□□ 0.02
SREBF1-221ENST00000583080 ADARP55265 1226 aaKnown RBP15.2■□□□□ 0.02
SREBF1-221ENST00000583080 RHAGQ02094 409 aa15.2■□□□□ 0.02
SREBF1-221ENST00000583080 USP10Q14694 798 aaKnown RBP15.2■□□□□ 0.02
SREBF1-221ENST00000583080 EXT1Q16394 746 aa15.2■□□□□ 0.02
SREBF1-221ENST00000583080 GHDCQ8N2G8 530 aa15.2■□□□□ 0.02
SREBF1-221ENST00000583080 CPSF7Q8N684 471 aaKnown RBP15.2■□□□□ 0.02
SREBF1-221ENST00000583080 FBXO15Q8NCQ5 510 aaPredicted RBP15.2■□□□□ 0.02
SREBF1-221ENST00000583080 M1APQ8TC57 530 aa15.2■□□□□ 0.02
SREBF1-221ENST00000583080 PHF10Q8WUB8 498 aaKnown RBP15.2■□□□□ 0.02
SREBF1-221ENST00000583080 SDCCAG3Q96C92 435 aa15.2■□□□□ 0.02
SREBF1-221ENST00000583080 NEU2Q9Y3R4 380 aa15.2■□□□□ 0.02
SREBF1-221ENST00000583080 ASB1Q9Y576 335 aa15.2■□□□□ 0.02
SREBF1-221ENST00000583080 TCRBV7S3A2A0A539 114 aa15.19■□□□□ 0.02
SREBF1-221ENST00000583080 DIAPH2O60879 1101 aa15.19■□□□□ 0.02
SREBF1-221ENST00000583080 ZNF24P17028 368 aa15.19■□□□□ 0.02
SREBF1-221ENST00000583080 PTGER1P34995 402 aa15.19■□□□□ 0.02
SREBF1-221ENST00000583080 NPY2RP49146 381 aa15.19■□□□□ 0.02
SREBF1-221ENST00000583080 RPS15AP62244 130 aaKnown RBP15.19■□□□□ 0.02
SREBF1-221ENST00000583080 TBPL1P62380 186 aa15.19■□□□□ 0.02
SREBF1-221ENST00000583080 ABRAXAS2Q15018 415 aa15.19■□□□□ 0.02
SREBF1-221ENST00000583080 SIX1Q15475 284 aaPredicted RBP15.19■□□□□ 0.02
SREBF1-221ENST00000583080 KIAA0930Q6ICG6 404 aaPredicted RBP15.19■□□□□ 0.02
SREBF1-221ENST00000583080 SLC25A25Q6KCM7 469 aa15.19■□□□□ 0.02
SREBF1-221ENST00000583080 CILP2Q8IUL8 1156 aa15.19■□□□□ 0.02
SREBF1-221ENST00000583080 KIF2BQ8N4N8 673 aa15.19■□□□□ 0.02
SREBF1-221ENST00000583080 SLC5A8Q8N695 610 aa15.19■□□□□ 0.02
SREBF1-221ENST00000583080 PRELID2Q8N945 189 aa15.19■□□□□ 0.02
SREBF1-221ENST00000583080 KCT2Q8NC54 265 aa15.19■□□□□ 0.02
SREBF1-221ENST00000583080 OR5T3Q8NGG3 340 aa15.19■□□□□ 0.02
SREBF1-221ENST00000583080 MCOLN3Q8TDD5 553 aa15.19■□□□□ 0.02
SREBF1-221ENST00000583080 TCF12Q99081 682 aa15.19■□□□□ 0.02
SREBF1-221ENST00000583080 EBNA1BP2Q99848 306 aaKnown RBP15.19■□□□□ 0.02
SREBF1-221ENST00000583080 TREX2Q9BQ50 279 aaPredicted RBP15.19■□□□□ 0.02
SREBF1-221ENST00000583080 LANCL2Q9NS86 450 aa15.19■□□□□ 0.02
SREBF1-221ENST00000583080 LRFN1Q9P244 771 aa15.19■□□□□ 0.02
SREBF1-221ENST00000583080 PPT2Q9UMR5 302 aa15.19■□□□□ 0.02
SREBF1-221ENST00000583080 SOX13Q9UN79 622 aa15.19■□□□□ 0.02
SREBF1-221ENST00000583080 FEZF1A0PJY2 475 aa15.18■□□□□ 0.02
SREBF1-221ENST00000583080 E9PLN8 166 aa15.18■□□□□ 0.02
SREBF1-221ENST00000583080 NME2P1O60361 137 aa15.18■□□□□ 0.02
SREBF1-221ENST00000583080 SLC25A12O75746 678 aa15.18■□□□□ 0.02
SREBF1-221ENST00000583080 TSPAN12O95859 305 aa15.18■□□□□ 0.02
SREBF1-221ENST00000583080 PTMSP20962 102 aa15.18■□□□□ 0.02
SREBF1-221ENST00000583080 NME2P22392 152 aa15.18■□□□□ 0.02
SREBF1-221ENST00000583080 SKIV2L2P42285 1042 aaKnown RBP15.18■□□□□ 0.02
SREBF1-221ENST00000583080 SLC26A5P58743 744 aa15.18■□□□□ 0.02
SREBF1-221ENST00000583080 KIF5AQ12840 1032 aa15.18■□□□□ 0.02
SREBF1-221ENST00000583080 NSDHLQ15738 373 aa15.18■□□□□ 0.02
SREBF1-221ENST00000583080 MAPKAPK3Q16644 382 aa15.18■□□□□ 0.02
SREBF1-221ENST00000583080 PIWIL4Q7Z3Z4 852 aaKnown RBP15.18■□□□□ 0.02
SREBF1-221ENST00000583080 PCGF5Q86SE9 256 aa15.18■□□□□ 0.02
SREBF1-221ENST00000583080 ZNF227Q86WZ6 799 aa15.18■□□□□ 0.02
SREBF1-221ENST00000583080 TMEM139Q8IV31 216 aa15.18■□□□□ 0.02
SREBF1-221ENST00000583080 MARVELD2Q8N4S9 558 aa15.18■□□□□ 0.02
SREBF1-221ENST00000583080 FAM98AQ8NCA5 519 aaKnown RBP15.18■□□□□ 0.02
SREBF1-221ENST00000583080 CA5BP1Q8WTZ4 195 aa15.18■□□□□ 0.02
SREBF1-221ENST00000583080 ASB11Q8WXH4 323 aa15.18■□□□□ 0.02
SREBF1-221ENST00000583080 PEX11GQ96HA9 241 aa15.18■□□□□ 0.02
SREBF1-221ENST00000583080 LPAR4Q99677 370 aa15.18■□□□□ 0.02
SREBF1-221ENST00000583080 VKORC1Q9BQB6 163 aa15.18■□□□□ 0.02
SREBF1-221ENST00000583080 CDCP1Q9H5V8 836 aa15.18■□□□□ 0.02
SREBF1-221ENST00000583080 ANKHQ9HCJ1 492 aa15.18■□□□□ 0.02
SREBF1-221ENST00000583080 TMEM184CQ9NVA4 438 aa15.18■□□□□ 0.02
SREBF1-221ENST00000583080 DRG1Q9Y295 367 aaKnown RBP15.18■□□□□ 0.02
SREBF1-221ENST00000583080 SPG11Q96JI7 2443 aa15.18■□□□□ 0.02
SREBF1-221ENST00000583080 KCNE1BA0A087WTH5 132 aa15.17■□□□□ 0.02
SREBF1-221ENST00000583080 GFYI3L273 518 aa15.17■□□□□ 0.02
SREBF1-221ENST00000583080 PFDN6O15212 129 aa15.17■□□□□ 0.02
SREBF1-221ENST00000583080 KIF5CO60282 957 aa15.17■□□□□ 0.02
SREBF1-221ENST00000583080 TPP2P29144 1249 aaPredicted RBP15.17■□□□□ 0.02
SREBF1-221ENST00000583080 ZNF75DP51815 510 aa15.17■□□□□ 0.02
SREBF1-221ENST00000583080 TERF1P54274 439 aa15.17■□□□□ 0.02
SREBF1-221ENST00000583080 TAS2R50P59544 299 aa15.17■□□□□ 0.02
SREBF1-221ENST00000583080 ACTN3Q08043 901 aaPredicted RBP15.17■□□□□ 0.02
SREBF1-221ENST00000583080 TTLL9Q3SXZ7 439 aa15.17■□□□□ 0.02
SREBF1-221ENST00000583080 ZNF470Q6ECI4 717 aa15.17■□□□□ 0.02
SREBF1-221ENST00000583080 ZNF549Q6P9A3 640 aa15.17■□□□□ 0.02
SREBF1-221ENST00000583080 CYHR1Q6ZMK1 362 aa15.17■□□□□ 0.02
SREBF1-221ENST00000583080 MBOAT1Q6ZNC8 495 aa15.17■□□□□ 0.02
SREBF1-221ENST00000583080 ASPGQ86U10 573 aa15.17■□□□□ 0.02
SREBF1-221ENST00000583080 SLC26A11Q86WA9 606 aa15.17■□□□□ 0.02
SREBF1-221ENST00000583080 LGI4Q8N135 537 aa15.17■□□□□ 0.02
SREBF1-221ENST00000583080 TM4SF19Q96DZ7 209 aa15.17■□□□□ 0.02
SREBF1-221ENST00000583080 CCDC177Q9NQR7 707 aaPredicted RBP15.17■□□□□ 0.02
SREBF1-221ENST00000583080 NAALAD2Q9Y3Q0 740 aa15.17■□□□□ 0.02
SREBF1-221ENST00000583080 MAGEB17A8MXT2 336 aa15.16■□□□□ 0.02
SREBF1-221ENST00000583080 PRRG2O14669 202 aa15.16■□□□□ 0.02
SREBF1-221ENST00000583080 NDC80O14777 642 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms