RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 TBC1D13Q9NVG8 400 aa2.6□□□□□ -1.99
SMCHD1-206ENST00000581631 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.6□□□□□ -1.99
SMCHD1-206ENST00000581631 ARID2Q68CP9 1835 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 IGHV4-30-2A0A087WSY4 118 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 SYNDIG1LA6NDD5 238 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 SHISA7A6NL88 538 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 C17orf105B2RV13 164 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 RTCAO00442 366 aaKnown RBP2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 TLX2O43763 284 aaPredicted RBP2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 ECE2O60344 883 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 CYTIPO60759 359 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 STAG3L1P0CL83 205 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 F3P13726 295 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 MYL6BP14649 208 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 AOC1P19801 751 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 IL4RP24394 825 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 HSPA4P34932 840 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 SFTPDP35247 375 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 HSD17B3P37058 310 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 PPP5CP53041 499 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 OR1D5P58170 312 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 CALD1Q05682 793 aaKnown RBP2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 FCHO2Q0JRZ9 810 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 MS4A18Q3C1V0 323 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 MFSD4BQ5TF39 518 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 CST9LP1Q5W188 147 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 ZNF841Q6ZN19 808 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 CDHR3Q6ZTQ4 885 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 PI4KAP1Q8N8J0 262 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 OR6J1Q8NGC5 347 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 OR52B6Q8NGF0 335 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 OR4D10Q8NGI6 311 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 C1orf147Q96MC9 270 aaPredicted RBP2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 SPATA33Q96N06 139 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 NEDD4LQ96PU5 975 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 CENPOQ9BU64 300 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 FZD8Q9H461 694 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 TUBB1Q9H4B7 451 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 HEXA-AS1Q9H8Q6 139 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 RNF121Q9H920 327 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 NLGN3Q9NZ94 848 aa2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 BCCIPQ9P287 314 aaKnown RBP eCLIP2.59□□□□□ -1.99
SMCHD1-206ENST00000581631 SHISA9B4DS77 424 aa2.58□□□□□ -2
SMCHD1-206ENST00000581631 P4HA2O15460 535 aa2.58□□□□□ -2
SMCHD1-206ENST00000581631 NXPH4O95158 308 aa2.58□□□□□ -2
SMCHD1-206ENST00000581631 GGPS1O95749 300 aa2.58□□□□□ -2
SMCHD1-206ENST00000581631 HOXD4P09016 255 aaPredicted RBP2.58□□□□□ -2
SMCHD1-206ENST00000581631 SELEP16581 610 aa2.58□□□□□ -2
SMCHD1-206ENST00000581631 CACNG1Q06432 222 aa2.58□□□□□ -2
SMCHD1-206ENST00000581631 MZT1Q08AG7 82 aa2.58□□□□□ -2
SMCHD1-206ENST00000581631 DUSP5Q16690 384 aa2.58□□□□□ -2
SMCHD1-206ENST00000581631 HIGD2BQ4VC39 106 aa2.58□□□□□ -2
SMCHD1-206ENST00000581631 FGD3Q5JSP0 725 aa2.58□□□□□ -2
SMCHD1-206ENST00000581631 ATP1A1-AS1Q5TC04 95 aa2.58□□□□□ -2
SMCHD1-206ENST00000581631 SUSD4Q5VX71 490 aa2.58□□□□□ -2
SMCHD1-206ENST00000581631 CPEB2Q7Z5Q1 589 aaKnown RBP2.58□□□□□ -2
SMCHD1-206ENST00000581631 PIGWQ7Z7B1 504 aa2.58□□□□□ -2
SMCHD1-206ENST00000581631 SLC25A42Q86VD7 318 aa2.58□□□□□ -2
SMCHD1-206ENST00000581631 CCDC63Q8NA47 563 aa2.58□□□□□ -2
SMCHD1-206ENST00000581631 OR10G7Q8NGN6 311 aa2.58□□□□□ -2
SMCHD1-206ENST00000581631 CHURC1Q8WUH1 139 aa2.58□□□□□ -2
SMCHD1-206ENST00000581631 SEPT1Q8WYJ6 367 aa2.58□□□□□ -2
SMCHD1-206ENST00000581631 MRPS27Q92552 414 aaKnown RBP2.58□□□□□ -2
SMCHD1-206ENST00000581631 TOMM40LQ969M1 308 aa2.58□□□□□ -2
SMCHD1-206ENST00000581631 RFT1Q96AA3 541 aa2.58□□□□□ -2
SMCHD1-206ENST00000581631 PGM2Q96G03 612 aa2.58□□□□□ -2
SMCHD1-206ENST00000581631 CHCHD5Q9BSY4 110 aa2.58□□□□□ -2
SMCHD1-206ENST00000581631 GTPBP2Q9BX10 602 aaKnown RBP2.58□□□□□ -2
SMCHD1-206ENST00000581631 ANKRD2Q9GZV1 360 aa2.58□□□□□ -2
SMCHD1-206ENST00000581631 SNX25Q9H3E2 840 aa2.58□□□□□ -2
SMCHD1-206ENST00000581631 PHPT1Q9NRX4 125 aaPredicted RBP2.58□□□□□ -2
SMCHD1-206ENST00000581631 ANKEF1Q9NU02 776 aa2.58□□□□□ -2
SMCHD1-206ENST00000581631 PKD2L2Q9NZM6 624 aa2.58□□□□□ -2
SMCHD1-206ENST00000581631 POLLQ9UGP5 575 aa2.58□□□□□ -2
SMCHD1-206ENST00000581631 IL36AQ9UHA7 158 aa2.58□□□□□ -2
SMCHD1-206ENST00000581631 STYXL1Q9Y6J8 313 aa2.58□□□□□ -2
SMCHD1-206ENST00000581631 IGLV4-3A0A075B6K6 122 aa2.57□□□□□ -2
SMCHD1-206ENST00000581631 A0A087WZ39 114 aa2.57□□□□□ -2
SMCHD1-206ENST00000581631 IGHV3-38A0A0C4DH36 116 aa2.57□□□□□ -2
SMCHD1-206ENST00000581631 LRCH4O75427 683 aa2.57□□□□□ -2
SMCHD1-206ENST00000581631 SAP30O75446 220 aa2.57□□□□□ -2
SMCHD1-206ENST00000581631 MYOGP15173 224 aa2.57□□□□□ -2
SMCHD1-206ENST00000581631 ACAT1P24752 427 aaKnown RBP2.57□□□□□ -2
SMCHD1-206ENST00000581631 DUTP33316 252 aaKnown RBP2.57□□□□□ -2
SMCHD1-206ENST00000581631 RAD52P43351 418 aa2.57□□□□□ -2
SMCHD1-206ENST00000581631 MTCP1P56278 107 aa2.57□□□□□ -2
SMCHD1-206ENST00000581631 CAPRIN1Q14444 709 aaKnown RBP2.57□□□□□ -2
SMCHD1-206ENST00000581631 ZNF146Q15072 292 aa2.57□□□□□ -2
SMCHD1-206ENST00000581631 TOMM20Q15388 145 aa2.57□□□□□ -2
SMCHD1-206ENST00000581631 RBBP7Q16576 425 aa2.57□□□□□ -2
SMCHD1-206ENST00000581631 KYNUQ16719 465 aa2.57□□□□□ -2
SMCHD1-206ENST00000581631 SPECC1Q5M775 1068 aa2.57□□□□□ -2
SMCHD1-206ENST00000581631 KRT80Q6KB66 452 aa2.57□□□□□ -2
SMCHD1-206ENST00000581631 C16orf54Q6UWD8 224 aa2.57□□□□□ -2
SMCHD1-206ENST00000581631 ENPP7Q6UWV6 458 aa2.57□□□□□ -2
SMCHD1-206ENST00000581631 C3P1Q6ZMU1 363 aa2.57□□□□□ -2
SMCHD1-206ENST00000581631 TIPARPQ7Z3E1 657 aaKnown RBP2.57□□□□□ -2
SMCHD1-206ENST00000581631 CCDC60Q8IWA6 550 aaPredicted RBP2.57□□□□□ -2
SMCHD1-206ENST00000581631 CAMKVQ8NCB2 501 aa2.57□□□□□ -2
SMCHD1-206ENST00000581631 RPLP0P6Q8NHW5 317 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms