RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 GRM7Q14831 915 aa13.66□□□□□ -0.22
SKA2-205ENST00000580541 GARNL3Q5VVW2 1013 aa13.66□□□□□ -0.22
SKA2-205ENST00000580541 CEACAM20Q6UY09 585 aa13.66□□□□□ -0.22
SKA2-205ENST00000580541 ASPGQ86U10 573 aa13.66□□□□□ -0.22
SKA2-205ENST00000580541 PPP1R3BQ86XI6 285 aa13.66□□□□□ -0.22
SKA2-205ENST00000580541 WDR75Q8IWA0 830 aaKnown RBP13.66□□□□□ -0.22
SKA2-205ENST00000580541 LSMEM2Q8N112 164 aa13.66□□□□□ -0.22
SKA2-205ENST00000580541 GBP7Q8N8V2 638 aaPredicted RBP13.66□□□□□ -0.22
SKA2-205ENST00000580541 TTC29Q8NA56 475 aaPredicted RBP13.66□□□□□ -0.22
SKA2-205ENST00000580541 SELENOMQ8WWX9 145 aa13.66□□□□□ -0.22
SKA2-205ENST00000580541 MOCOSQ96EN8 888 aa13.66□□□□□ -0.22
SKA2-205ENST00000580541 CMTM7Q96FZ5 175 aa13.66□□□□□ -0.22
SKA2-205ENST00000580541 C7orf26Q96N11 449 aa13.66□□□□□ -0.22
SKA2-205ENST00000580541 TEFMQ96QE5 360 aaKnown RBP13.66□□□□□ -0.22
SKA2-205ENST00000580541 OR6C1Q96RD1 312 aa13.66□□□□□ -0.22
SKA2-205ENST00000580541 B3GNT4Q9C0J1 378 aa13.66□□□□□ -0.22
SKA2-205ENST00000580541 CCDC134Q9H6E4 229 aa13.66□□□□□ -0.22
SKA2-205ENST00000580541 BRF2Q9HAW0 419 aa13.66□□□□□ -0.22
SKA2-205ENST00000580541 ACSS2Q9NR19 701 aa13.66□□□□□ -0.22
SKA2-205ENST00000580541 SLC39A1Q9NY26 324 aa13.66□□□□□ -0.22
SKA2-205ENST00000580541 FAM53CQ9NYF3 392 aa13.66□□□□□ -0.22
SKA2-205ENST00000580541 AHSPQ9NZD4 102 aa13.66□□□□□ -0.22
SKA2-205ENST00000580541 HAO1Q9UJM8 370 aa13.66□□□□□ -0.22
SKA2-205ENST00000580541 ZNF490Q9ULM2 529 aaPredicted RBP13.66□□□□□ -0.22
SKA2-205ENST00000580541 PPT2Q9UMR5 302 aa13.66□□□□□ -0.22
SKA2-205ENST00000580541 LOXL2Q9Y4K0 774 aa13.66□□□□□ -0.22
SKA2-205ENST00000580541 A0A088AWK7 358 aa13.65□□□□□ -0.22
SKA2-205ENST00000580541 SLC28A1O00337 649 aa13.65□□□□□ -0.22
SKA2-205ENST00000580541 MANBAO00462 879 aa13.65□□□□□ -0.22
SKA2-205ENST00000580541 PLD2O14939 933 aa13.65□□□□□ -0.22
SKA2-205ENST00000580541 CASC3O15234 703 aaKnown RBP13.65□□□□□ -0.22
SKA2-205ENST00000580541 ITM2AO43736 263 aa13.65□□□□□ -0.22
SKA2-205ENST00000580541 PRAMEF4O60810 478 aa13.65□□□□□ -0.22
SKA2-205ENST00000580541 SERPIND1P05546 499 aa13.65□□□□□ -0.22
SKA2-205ENST00000580541 CHRNGP07510 517 aa13.65□□□□□ -0.22
SKA2-205ENST00000580541 FOLR1P15328 257 aa13.65□□□□□ -0.22
SKA2-205ENST00000580541 CD22P20273 847 aa13.65□□□□□ -0.22
SKA2-205ENST00000580541 ZNF10P21506 573 aaPredicted RBP13.65□□□□□ -0.22
SKA2-205ENST00000580541 BCL6P41182 706 aa13.65□□□□□ -0.22
SKA2-205ENST00000580541 CYP4F3Q08477 520 aa13.65□□□□□ -0.22
SKA2-205ENST00000580541 C16orf72Q14CZ0 275 aa13.65□□□□□ -0.22
SKA2-205ENST00000580541 TMEM35AQ53FP2 167 aa13.65□□□□□ -0.22
SKA2-205ENST00000580541 WASHC2DQ5SRD0 308 aa13.65□□□□□ -0.22
SKA2-205ENST00000580541 DCAF12Q5T6F0 453 aa13.65□□□□□ -0.22
SKA2-205ENST00000580541 PRAMEF9Q5VWM5 478 aa13.65□□□□□ -0.22
SKA2-205ENST00000580541 CSNK1A1LQ8N752 337 aa13.65□□□□□ -0.22
SKA2-205ENST00000580541 ZNF740Q8NDX6 193 aa13.65□□□□□ -0.22
SKA2-205ENST00000580541 HUS1BQ8NHY5 278 aa13.65□□□□□ -0.22
SKA2-205ENST00000580541 TAAR9Q96RI9 348 aa13.65□□□□□ -0.22
SKA2-205ENST00000580541 SERPINI1Q99574 410 aa13.65□□□□□ -0.22
SKA2-205ENST00000580541 NDC1Q9BTX1 674 aa13.65□□□□□ -0.22
SKA2-205ENST00000580541 SHCBP1LQ9BZQ2 653 aa13.65□□□□□ -0.22
SKA2-205ENST00000580541 ENAMQ9NRM1 1142 aa13.65□□□□□ -0.22
SKA2-205ENST00000580541 ZNF225Q9UK10 706 aa13.65□□□□□ -0.22
SKA2-205ENST00000580541 SRPK3Q9UPE1 567 aa13.65□□□□□ -0.22
SKA2-205ENST00000580541 SERTM1A2A2V5 107 aa13.64□□□□□ -0.23
SKA2-205ENST00000580541 TRPC5OSA6NMA1 111 aa13.64□□□□□ -0.23
SKA2-205ENST00000580541 FFAR3O14843 346 aa13.64□□□□□ -0.23
SKA2-205ENST00000580541 GPR42O15529 346 aa13.64□□□□□ -0.23
SKA2-205ENST00000580541 NDUFS4O43181 175 aa13.64□□□□□ -0.23
SKA2-205ENST00000580541 RGS14O43566 566 aa13.64□□□□□ -0.23
SKA2-205ENST00000580541 PRAMEF10O60809 474 aa13.64□□□□□ -0.23
SKA2-205ENST00000580541 VIMP08670 466 aaKnown RBP13.64□□□□□ -0.23
SKA2-205ENST00000580541 FGF5P12034 268 aa13.64□□□□□ -0.23
SKA2-205ENST00000580541 PDX1P52945 283 aa13.64□□□□□ -0.23
SKA2-205ENST00000580541 ARFIP1P53367 373 aa13.64□□□□□ -0.23
SKA2-205ENST00000580541 OCRLQ01968 901 aa13.64□□□□□ -0.23
SKA2-205ENST00000580541 GUCY1A3Q02108 690 aa13.64□□□□□ -0.23
SKA2-205ENST00000580541 CSTF3Q12996 717 aaKnown RBP13.64□□□□□ -0.23
SKA2-205ENST00000580541 DDX39BQ13838 428 aaKnown RBP13.64□□□□□ -0.23
SKA2-205ENST00000580541 KCNAB1Q14722 419 aa13.64□□□□□ -0.23
SKA2-205ENST00000580541 GPR19Q15760 415 aa13.64□□□□□ -0.23
SKA2-205ENST00000580541 IMPG1Q17R60 797 aa13.64□□□□□ -0.23
SKA2-205ENST00000580541 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.64□□□□□ -0.23
SKA2-205ENST00000580541 KANK2Q63ZY3 851 aa13.64□□□□□ -0.23
SKA2-205ENST00000580541 RNF165Q6ZSG1 346 aa13.64□□□□□ -0.23
SKA2-205ENST00000580541 ABHD13Q7L211 337 aa13.64□□□□□ -0.23
SKA2-205ENST00000580541 PLD3Q8IV08 490 aa13.64□□□□□ -0.23
SKA2-205ENST00000580541 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.64□□□□□ -0.23
SKA2-205ENST00000580541 WDR20Q8TBZ3 569 aa13.64□□□□□ -0.23
SKA2-205ENST00000580541 PIWIL2Q8TC59 973 aaKnown RBP13.64□□□□□ -0.23
SKA2-205ENST00000580541 NT5CQ8TCD5 201 aa13.64□□□□□ -0.23
SKA2-205ENST00000580541 ZNF501Q96CX3 271 aaPredicted RBP13.64□□□□□ -0.23
SKA2-205ENST00000580541 MTFMTQ96DP5 389 aaKnown RBP13.64□□□□□ -0.23
SKA2-205ENST00000580541 TM4SF19Q96DZ7 209 aa13.64□□□□□ -0.23
SKA2-205ENST00000580541 ZNF285Q96NJ3 590 aa13.64□□□□□ -0.23
SKA2-205ENST00000580541 DDA1Q9BW61 102 aa13.64□□□□□ -0.23
SKA2-205ENST00000580541 ROGDIQ9GZN7 287 aa13.64□□□□□ -0.23
SKA2-205ENST00000580541 OCIAD1Q9NX40 245 aa13.64□□□□□ -0.23
SKA2-205ENST00000580541 ZDHHC2Q9UIJ5 367 aa13.64□□□□□ -0.23
SKA2-205ENST00000580541 CDC14AQ9UNH5 594 aa13.64□□□□□ -0.23
SKA2-205ENST00000580541 TIMM22Q9Y584 194 aa13.64□□□□□ -0.23
SKA2-205ENST00000580541 PCDHGA8Q9Y5G5 932 aa13.64□□□□□ -0.23
SKA2-205ENST00000580541 LOC105369274A0A096LPK9 316 aa13.63□□□□□ -0.23
SKA2-205ENST00000580541 LOC102723532A0A0G2JNH3 316 aa13.63□□□□□ -0.23
SKA2-205ENST00000580541 FITM1A5D6W6 292 aa13.63□□□□□ -0.23
SKA2-205ENST00000580541 TCP11X1B4DZS4 312 aa13.63□□□□□ -0.23
SKA2-205ENST00000580541 POLR3GO15318 223 aaPredicted RBP13.63□□□□□ -0.23
SKA2-205ENST00000580541 VPS4BO75351 444 aa13.63□□□□□ -0.23
SKA2-205ENST00000580541 LYPLA1O75608 230 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms