RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 MTFMTQ96DP5 389 aaKnown RBP16.88■□□□□ 0.29
MKS1-209ENST00000580127 HIST1H2AHQ96KK5 128 aa16.88■□□□□ 0.29
MKS1-209ENST00000580127 OR1F2PQ96R84 312 aa16.88■□□□□ 0.29
MKS1-209ENST00000580127 HIST1H2AJQ99878 128 aa16.88■□□□□ 0.29
MKS1-209ENST00000580127 H2AFJQ9BTM1 129 aa16.88■□□□□ 0.29
MKS1-209ENST00000580127 XAB2Q9HCS7 855 aaKnown RBP16.88■□□□□ 0.29
MKS1-209ENST00000580127 HCN3Q9P1Z3 774 aa16.88■□□□□ 0.29
MKS1-209ENST00000580127 ZNF835Q9Y2P0 537 aa16.88■□□□□ 0.29
MKS1-209ENST00000580127 SLC22A7Q9Y694 548 aa16.88■□□□□ 0.29
MKS1-209ENST00000580127 NPIPA5E9PKD4 350 aa16.87■□□□□ 0.29
MKS1-209ENST00000580127 SGK494L7N484 410 aa16.87■□□□□ 0.29
MKS1-209ENST00000580127 ASNA1O43681 348 aa16.87■□□□□ 0.29
MKS1-209ENST00000580127 AVILO75366 819 aa16.87■□□□□ 0.29
MKS1-209ENST00000580127 C8GP07360 202 aa16.87■□□□□ 0.29
MKS1-209ENST00000580127 KCNJ1P48048 391 aa16.87■□□□□ 0.29
MKS1-209ENST00000580127 PMP22Q01453 160 aa16.87■□□□□ 0.29
MKS1-209ENST00000580127 SRSF11Q05519 484 aaKnown RBP16.87■□□□□ 0.29
MKS1-209ENST00000580127 GPS1Q13098 491 aa16.87■□□□□ 0.29
MKS1-209ENST00000580127 CTBP1Q13363 440 aa16.87■□□□□ 0.29
MKS1-209ENST00000580127 ABRAXAS2Q15018 415 aa16.87■□□□□ 0.29
MKS1-209ENST00000580127 SIX1Q15475 284 aaPredicted RBP16.87■□□□□ 0.29
MKS1-209ENST00000580127 SFT2D3Q587I9 215 aa16.87■□□□□ 0.29
MKS1-209ENST00000580127 FCRLBQ6BAA4 426 aa16.87■□□□□ 0.29
MKS1-209ENST00000580127 CAPN13Q6MZZ7 669 aaPredicted RBP16.87■□□□□ 0.29
MKS1-209ENST00000580127 TMEM214Q6NUQ4 689 aaKnown RBP16.87■□□□□ 0.29
MKS1-209ENST00000580127 PAPD4Q6PIY7 484 aaKnown RBP16.87■□□□□ 0.29
MKS1-209ENST00000580127 CYHR1Q6ZMK1 362 aa16.87■□□□□ 0.29
MKS1-209ENST00000580127 Q6ZPB1 254 aaPredicted RBP16.87■□□□□ 0.29
MKS1-209ENST00000580127 LANCL3Q6ZV70 420 aa16.87■□□□□ 0.29
MKS1-209ENST00000580127 ASPGQ86U10 573 aa16.87■□□□□ 0.29
MKS1-209ENST00000580127 CRLF3Q8IUI8 442 aa16.87■□□□□ 0.29
MKS1-209ENST00000580127 LRRC56Q8IYG6 542 aaPredicted RBP16.87■□□□□ 0.29
MKS1-209ENST00000580127 GHDCQ8N2G8 530 aa16.87■□□□□ 0.29
MKS1-209ENST00000580127 MDS2Q8NDY4 140 aa16.87■□□□□ 0.29
MKS1-209ENST00000580127 ZNF669Q96BR6 464 aaPredicted RBP16.87■□□□□ 0.29
MKS1-209ENST00000580127 TM4SF19Q96DZ7 209 aa16.87■□□□□ 0.29
MKS1-209ENST00000580127 RBSNQ9H1K0 784 aa16.87■□□□□ 0.29
MKS1-209ENST00000580127 NPIPA1Q9UND3 350 aa16.87■□□□□ 0.29
MKS1-209ENST00000580127 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.86■□□□□ 0.29
MKS1-209ENST00000580127 MAGEB17A8MXT2 336 aa16.86■□□□□ 0.29
MKS1-209ENST00000580127 PRRG2O14669 202 aa16.86■□□□□ 0.29
MKS1-209ENST00000580127 NDC80O14777 642 aa16.86■□□□□ 0.29
MKS1-209ENST00000580127 CEP104O60308 925 aa16.86■□□□□ 0.29
MKS1-209ENST00000580127 SP1P08047 785 aa16.86■□□□□ 0.29
MKS1-209ENST00000580127 IL1RNP18510 177 aa16.86■□□□□ 0.29
MKS1-209ENST00000580127 JAK1P23458 1154 aa16.86■□□□□ 0.29
MKS1-209ENST00000580127 IMPA1P29218 277 aa16.86■□□□□ 0.29
MKS1-209ENST00000580127 OR4D2P58180 307 aa16.86■□□□□ 0.29
MKS1-209ENST00000580127 MPP1Q00013 466 aa16.86■□□□□ 0.29
MKS1-209ENST00000580127 SPINK14Q6IE38 97 aa16.86■□□□□ 0.29
MKS1-209ENST00000580127 SLC25A25Q6KCM7 469 aa16.86■□□□□ 0.29
MKS1-209ENST00000580127 VN1R4Q7Z5H5 301 aa16.86■□□□□ 0.29
MKS1-209ENST00000580127 RPS19BP1Q86WX3 136 aaKnown RBP16.86■□□□□ 0.29
MKS1-209ENST00000580127 ADAMTS18Q8TE60 1221 aa16.86■□□□□ 0.29
MKS1-209ENST00000580127 CHTF18Q8WVB6 975 aa16.86■□□□□ 0.29
MKS1-209ENST00000580127 TMEM125Q96AQ2 219 aa16.86■□□□□ 0.29
MKS1-209ENST00000580127 SCMH1Q96GD3 660 aa16.86■□□□□ 0.29
MKS1-209ENST00000580127 GPR21Q99679 349 aa16.86■□□□□ 0.29
MKS1-209ENST00000580127 HAUS8Q9BT25 410 aa16.86■□□□□ 0.29
MKS1-209ENST00000580127 TRIM54Q9BYV2 358 aa16.86■□□□□ 0.29
MKS1-209ENST00000580127 SYNPO2LQ9H987 977 aa16.86■□□□□ 0.29
MKS1-209ENST00000580127 PARVBQ9HBI1 364 aa16.86■□□□□ 0.29
MKS1-209ENST00000580127 FBXO6Q9NRD1 293 aaPredicted RBP16.86■□□□□ 0.29
MKS1-209ENST00000580127 C20orf96Q9NUD7 363 aaPredicted RBP16.86■□□□□ 0.29
MKS1-209ENST00000580127 TRMT6Q9UJA5 497 aaKnown RBP16.86■□□□□ 0.29
MKS1-209ENST00000580127 TINAGQ9UJW2 476 aa16.86■□□□□ 0.29
MKS1-209ENST00000580127 ITGB1BP2Q9UKP3 347 aa16.86■□□□□ 0.29
MKS1-209ENST00000580127 MEMO1Q9Y316 297 aa16.86■□□□□ 0.29
MKS1-209ENST00000580127 ASPDHA6ND91 283 aa16.85■□□□□ 0.29
MKS1-209ENST00000580127 GABRR3A8MPY1 467 aa16.85■□□□□ 0.29
MKS1-209ENST00000580127 TSPAN12O95859 305 aa16.85■□□□□ 0.29
MKS1-209ENST00000580127 STATHP02808 62 aa16.85■□□□□ 0.29
MKS1-209ENST00000580127 MAGEA6P43360 314 aa16.85■□□□□ 0.29
MKS1-209ENST00000580127 TERF1P54274 439 aa16.85■□□□□ 0.29
MKS1-209ENST00000580127 CSNK1G2P78368 415 aa16.85■□□□□ 0.29
MKS1-209ENST00000580127 TRIP13Q15645 432 aaPredicted RBP16.85■□□□□ 0.29
MKS1-209ENST00000580127 MAPKAPK3Q16644 382 aa16.85■□□□□ 0.29
MKS1-209ENST00000580127 SPC24Q8NBT2 197 aa16.85■□□□□ 0.29
MKS1-209ENST00000580127 MCUQ8NE86 351 aa16.85■□□□□ 0.29
MKS1-209ENST00000580127 ZCCHC10Q8TBK6 192 aa16.85■□□□□ 0.29
MKS1-209ENST00000580127 ALKBH8Q96BT7 664 aaKnown RBP16.85■□□□□ 0.29
MKS1-209ENST00000580127 SIGLEC12Q96PQ1 595 aa16.85■□□□□ 0.29
MKS1-209ENST00000580127 SLC30A3Q99726 388 aa16.85■□□□□ 0.29
MKS1-209ENST00000580127 CLK4Q9HAZ1 481 aaKnown RBP16.85■□□□□ 0.29
MKS1-209ENST00000580127 ANKRD10Q9NXR5 420 aa16.85■□□□□ 0.29
MKS1-209ENST00000580127 COQ3Q9NZJ6 369 aa16.85■□□□□ 0.29
MKS1-209ENST00000580127 LRFN1Q9P244 771 aa16.85■□□□□ 0.29
MKS1-209ENST00000580127 FBXO5Q9UKT4 447 aa16.85■□□□□ 0.29
MKS1-209ENST00000580127 NAALAD2Q9Y3Q0 740 aa16.85■□□□□ 0.29
MKS1-209ENST00000580127 MAD1L1Q9Y6D9 718 aa16.85■□□□□ 0.29
MKS1-209ENST00000580127 TCRBV7S3A2A0A539 114 aa16.84■□□□□ 0.29
MKS1-209ENST00000580127 SLC16A5O15375 505 aa16.84■□□□□ 0.29
MKS1-209ENST00000580127 RDH16O75452 317 aa16.84■□□□□ 0.29
MKS1-209ENST00000580127 KRT14P02533 472 aa16.84■□□□□ 0.29
MKS1-209ENST00000580127 CDC25BP30305 580 aa16.84■□□□□ 0.29
MKS1-209ENST00000580127 CYB561P49447 251 aa16.84■□□□□ 0.29
MKS1-209ENST00000580127 VPS41P49754 854 aa16.84■□□□□ 0.29
MKS1-209ENST00000580127 CCR8P51685 355 aa16.84■□□□□ 0.29
MKS1-209ENST00000580127 TBPL1P62380 186 aa16.84■□□□□ 0.29
MKS1-209ENST00000580127 ADORA2A-AS1P86434 159 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms