RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 FEZF1A0PJY2 475 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 OR1F1O43749 312 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 PRAMEF2O60811 474 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 SEC24DO94855 1032 aaPredicted RBP12.96□□□□□ -0.33
GGA3-208ENST00000579743 CLDN1O95832 211 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 WDPCPO95876 746 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 AHSGP02765 367 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 SERPIND1P05546 499 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 F7P08709 466 aaPredicted RBP12.96□□□□□ -0.33
GGA3-208ENST00000579743 STSP08842 583 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 RNF224P0DH78 156 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 ITGAMP11215 1152 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 CDH1P12830 882 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 DCTP40126 519 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 MEF2AQ02078 507 aaPredicted RBP12.96□□□□□ -0.33
GGA3-208ENST00000579743 PWP1Q13610 501 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 CSHL1Q14406 222 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 NAA30Q147X3 362 aaPredicted RBP12.96□□□□□ -0.33
GGA3-208ENST00000579743 MORF4L2Q15014 288 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 NSDHLQ15738 373 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 MEP1AQ16819 746 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 FAM45BPQ6NSW5 357 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 ABHD13Q7L211 337 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 VN1R4Q7Z5H5 301 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 SLC26A11Q86WA9 606 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 CNTN4Q8IWV2 1026 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 SLC5A8Q8N695 610 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 MFSD9Q8NBP5 474 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 ZCCHC10Q8TBK6 192 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 FAM45AQ8TCE6 357 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 SLCO2A1Q92959 643 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 TM4SF19Q96DZ7 209 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 SNF8Q96H20 258 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 IMMP1LQ96LU5 166 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 LPAR4Q99677 370 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 MESP1Q9BRJ9 268 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 SGPP1Q9BX95 441 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 CLK4Q9HAZ1 481 aaKnown RBP12.96□□□□□ -0.33
GGA3-208ENST00000579743 KCNK13Q9HB14 408 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 ADAMTS6Q9UKP5 1117 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 VWA7Q9Y334 891 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 NAALAD2Q9Y3Q0 740 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 DYRK1BQ9Y463 629 aa12.96□□□□□ -0.33
GGA3-208ENST00000579743 ENO4A6NNW6 628 aa12.95□□□□□ -0.34
GGA3-208ENST00000579743 SGK494L7N484 410 aa12.95□□□□□ -0.34
GGA3-208ENST00000579743 E2F3O00716 465 aa12.95□□□□□ -0.34
GGA3-208ENST00000579743 CDK2AP1O14519 115 aa12.95□□□□□ -0.34
GGA3-208ENST00000579743 TTI1O43156 1089 aa12.95□□□□□ -0.34
GGA3-208ENST00000579743 NDUFS4O43181 175 aa12.95□□□□□ -0.34
GGA3-208ENST00000579743 STATHP02808 62 aa12.95□□□□□ -0.34
GGA3-208ENST00000579743 NPPBP16860 134 aa12.95□□□□□ -0.34
GGA3-208ENST00000579743 ARL4CP56559 192 aa12.95□□□□□ -0.34
GGA3-208ENST00000579743 ABRAXAS2Q15018 415 aa12.95□□□□□ -0.34
GGA3-208ENST00000579743 ANKRD37Q7Z713 158 aa12.95□□□□□ -0.34
GGA3-208ENST00000579743 FJX1Q86VR8 437 aa12.95□□□□□ -0.34
GGA3-208ENST00000579743 KCT2Q8NC54 265 aa12.95□□□□□ -0.34
GGA3-208ENST00000579743 FAM98AQ8NCA5 519 aaKnown RBP12.95□□□□□ -0.34
GGA3-208ENST00000579743 ARMC2Q8NEN0 867 aa12.95□□□□□ -0.34
GGA3-208ENST00000579743 ABHD11Q8NFV4 315 aa12.95□□□□□ -0.34
GGA3-208ENST00000579743 M1APQ8TC57 530 aa12.95□□□□□ -0.34
GGA3-208ENST00000579743 FBXL8Q96CD0 374 aa12.95□□□□□ -0.34
GGA3-208ENST00000579743 CFAP36Q96G28 342 aa12.95□□□□□ -0.34
GGA3-208ENST00000579743 VPS39Q96JC1 886 aa12.95□□□□□ -0.34
GGA3-208ENST00000579743 UTP23Q9BRU9 249 aaKnown RBP12.95□□□□□ -0.34
GGA3-208ENST00000579743 DDX47Q9H0S4 455 aaKnown RBP12.95□□□□□ -0.34
GGA3-208ENST00000579743 ZFATQ9P243 1243 aa12.95□□□□□ -0.34
GGA3-208ENST00000579743 SEC14L3Q9UDX4 400 aa12.95□□□□□ -0.34
GGA3-208ENST00000579743 COL12A1Q99715 3063 aa12.94□□□□□ -0.34
GGA3-208ENST00000579743 POLEQ07864 2286 aa12.94□□□□□ -0.34
GGA3-208ENST00000579743 TRBC2A0A5B9 178 aa12.94□□□□□ -0.34
GGA3-208ENST00000579743 MAGEB17A8MXT2 336 aa12.94□□□□□ -0.34
GGA3-208ENST00000579743 PSMD12O00232 456 aaPredicted RBP12.94□□□□□ -0.34
GGA3-208ENST00000579743 RDH16O75452 317 aa12.94□□□□□ -0.34
GGA3-208ENST00000579743 F10P00742 488 aa12.94□□□□□ -0.34
GGA3-208ENST00000579743 CD46P15529 392 aa12.94□□□□□ -0.34
GGA3-208ENST00000579743 ALOX12P18054 663 aa12.94□□□□□ -0.34
GGA3-208ENST00000579743 CDKN2DP55273 166 aa12.94□□□□□ -0.34
GGA3-208ENST00000579743 ZRSR2Q15696 482 aaKnown RBP12.94□□□□□ -0.34
GGA3-208ENST00000579743 ZNF766Q5HY98 468 aa12.94□□□□□ -0.34
GGA3-208ENST00000579743 ACER2Q5QJU3 275 aa12.94□□□□□ -0.34
GGA3-208ENST00000579743 HECTD2Q5U5R9 776 aa12.94□□□□□ -0.34
GGA3-208ENST00000579743 ZNF787Q6DD87 383 aa12.94□□□□□ -0.34
GGA3-208ENST00000579743 STRA8Q7Z7C7 330 aa12.94□□□□□ -0.34
GGA3-208ENST00000579743 AGGF1Q8N302 714 aaeCLIP12.94□□□□□ -0.34
GGA3-208ENST00000579743 NKAPQ8N5F7 415 aaKnown RBP12.94□□□□□ -0.34
GGA3-208ENST00000579743 TMEM178AQ8NBL3 297 aa12.94□□□□□ -0.34
GGA3-208ENST00000579743 PLPP5Q8NEB5 264 aa12.94□□□□□ -0.34
GGA3-208ENST00000579743 TRPV3Q8NET8 790 aa12.94□□□□□ -0.34
GGA3-208ENST00000579743 ANP32BQ92688 251 aaKnown RBP12.94□□□□□ -0.34
GGA3-208ENST00000579743 RELTQ969Z4 430 aa12.94□□□□□ -0.34
GGA3-208ENST00000579743 TBC1D20Q96BZ9 403 aa12.94□□□□□ -0.34
GGA3-208ENST00000579743 MACROD1Q9BQ69 325 aa12.94□□□□□ -0.34
GGA3-208ENST00000579743 AIF1LQ9BQI0 150 aa12.94□□□□□ -0.34
GGA3-208ENST00000579743 SYNPO2LQ9H987 977 aa12.94□□□□□ -0.34
GGA3-208ENST00000579743 NSMCE4AQ9NXX6 385 aa12.94□□□□□ -0.34
GGA3-208ENST00000579743 COPG2Q9UBF2 871 aa12.94□□□□□ -0.34
GGA3-208ENST00000579743 PCDHGB6Q9Y5F9 930 aa12.94□□□□□ -0.34
GGA3-208ENST00000579743 KCNE2Q9Y6J6 123 aa12.94□□□□□ -0.34
GGA3-208ENST00000579743 DOPEY1Q5JWR5 2465 aa12.93□□□□□ -0.34
GGA3-208ENST00000579743 TRGV8A0A0C4DH27 118 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms