RNA–Protein interactions for RNA: ENST00000579632.5

CDK5RAP3-214, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-214ENST00000579632 TUBGCP3Q96CW5 907 aa10.08□□□□□ -0.8
CDK5RAP3-214ENST00000579632 MTFMTQ96DP5 389 aaKnown RBP10.08□□□□□ -0.8
CDK5RAP3-214ENST00000579632 CMTM7Q96FZ5 175 aa10.08□□□□□ -0.8
CDK5RAP3-214ENST00000579632 TMEM74Q96NL1 305 aa10.08□□□□□ -0.8
CDK5RAP3-214ENST00000579632 SERPINI1Q99574 410 aa10.08□□□□□ -0.8
CDK5RAP3-214ENST00000579632 CCDC28BQ9BUN5 200 aa10.08□□□□□ -0.8
CDK5RAP3-214ENST00000579632 NLNQ9BYT8 704 aa10.08□□□□□ -0.8
CDK5RAP3-214ENST00000579632 ACPTQ9BZG2 426 aa10.08□□□□□ -0.8
CDK5RAP3-214ENST00000579632 KLHL25Q9H0H3 589 aa10.08□□□□□ -0.8
CDK5RAP3-214ENST00000579632 SPNS1Q9H2V7 528 aa10.08□□□□□ -0.8
CDK5RAP3-214ENST00000579632 SYNDIG1Q9H7V2 258 aa10.08□□□□□ -0.8
CDK5RAP3-214ENST00000579632 KCNK13Q9HB14 408 aa10.08□□□□□ -0.8
CDK5RAP3-214ENST00000579632 SOHLH2Q9NX45 425 aa10.08□□□□□ -0.8
CDK5RAP3-214ENST00000579632 TMEM9Q9P0T7 183 aa10.08□□□□□ -0.8
CDK5RAP3-214ENST00000579632 KLHL3Q9UH77 587 aa10.08□□□□□ -0.8
CDK5RAP3-214ENST00000579632 ATXN7L1Q9ULK2 861 aaPredicted RBP10.08□□□□□ -0.8
CDK5RAP3-214ENST00000579632 TRIM33Q9UPN9 1127 aa10.08□□□□□ -0.8
CDK5RAP3-214ENST00000579632 PLCL2Q9UPR0 1127 aa10.08□□□□□ -0.8
CDK5RAP3-214ENST00000579632 CCL27Q9Y4X3 112 aa10.08□□□□□ -0.8
CDK5RAP3-214ENST00000579632 A0A0J9YVX5 310 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 IGHV5-10-1A0A0J9YXX1 117 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 URADA6NGE7 173 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 TMX2-CTNND1H3BSU7 103 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 SDHDO14521 159 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 LSM1O15116 133 aaKnown RBP10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 NDUFS4O43181 175 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 NRP2O60462 931 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 GFRA3O60609 400 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 SEMA3DO95025 777 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 TGFB1P01137 390 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 JUNP05412 331 aaKnown RBP10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 PRPH2P23942 346 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 EPHA3P29320 983 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 ARFIP1P53367 373 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 STXBP1P61764 594 aaKnown RBP10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 IRX1P78414 480 aaPredicted RBP10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 RGS1Q08116 209 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 CYP4F3Q08477 520 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 DDX39BQ13838 428 aaKnown RBP10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 NR6A1Q15406 480 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 ATP6AP1LQ52LC2 224 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 SNAP47Q5SQN1 464 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 DEPDC1Q5TB30 811 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 VWA5B1Q5TIE3 1220 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 CYB5D1Q6P9G0 228 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 SCIMPQ6UWF3 145 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 RBM44Q6ZP01 1051 aaKnown RBP10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 Q6ZSR9 355 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 LARP4Q71RC2 724 aaKnown RBP eCLIP10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 TMPRSS9Q7Z410 1059 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 VN1R5Q7Z5H4 357 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 ASPGQ86U10 573 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 PLD3Q8IV08 490 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 SLITRK4Q8IW52 837 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 ANKS4BQ8N8V4 417 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 SRFBP1Q8NEF9 429 aaKnown RBP10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 NT5CQ8TCD5 201 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 CREB3L4Q8TEY5 395 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 C10orf82Q8WW14 230 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 SLC13A3Q8WWT9 602 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 N4BP2L2Q92802 583 aaPredicted RBP10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 THOC1Q96FV9 657 aaKnown RBP10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 PRR11Q96HE9 360 aaPredicted RBP10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 C3orf30Q96M34 536 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 RILPQ96NA2 401 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 HBEGFQ99075 208 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 TMEM120AQ9BXJ8 343 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 RABEP2Q9H5N1 569 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 WDR55Q9H6Y2 383 aaPredicted RBP10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 AKTIPQ9H8T0 292 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 FAM60AQ9NP50 221 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 TCF7L2Q9NQB0 619 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 ENAMQ9NRM1 1142 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 MRGBPQ9NV56 204 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 C1orf109Q9NX04 203 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 AHSPQ9NZD4 102 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 SLC12A4Q9UP95 1085 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 ARL2BPQ9Y2Y0 163 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 TMED5Q9Y3A6 229 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 PTGDR2Q9Y5Y4 395 aa10.07□□□□□ -0.8
CDK5RAP3-214ENST00000579632 ATP6AP2A0A1C7CYW4 349 aa10.06□□□□□ -0.8
CDK5RAP3-214ENST00000579632 LRIT2A6NDA9 550 aa10.06□□□□□ -0.8
CDK5RAP3-214ENST00000579632 H0YGG7 62 aa10.06□□□□□ -0.8
CDK5RAP3-214ENST00000579632 PRAMEF10O60809 474 aa10.06□□□□□ -0.8
CDK5RAP3-214ENST00000579632 ATP6AP2O75787 350 aa10.06□□□□□ -0.8
CDK5RAP3-214ENST00000579632 PRR35P0CG20 571 aa10.06□□□□□ -0.8
CDK5RAP3-214ENST00000579632 CEACAM1P13688 526 aa10.06□□□□□ -0.8
CDK5RAP3-214ENST00000579632 ACPPP15309 386 aa10.06□□□□□ -0.8
CDK5RAP3-214ENST00000579632 LBPP18428 481 aa10.06□□□□□ -0.8
CDK5RAP3-214ENST00000579632 CCKBRP32239 447 aa10.06□□□□□ -0.8
CDK5RAP3-214ENST00000579632 TSFMP43897 325 aaKnown RBP10.06□□□□□ -0.8
CDK5RAP3-214ENST00000579632 SEPHS1P49903 392 aa10.06□□□□□ -0.8
CDK5RAP3-214ENST00000579632 ARF3P61204 181 aaPredicted RBP10.06□□□□□ -0.8
CDK5RAP3-214ENST00000579632 RPS13P62277 151 aaKnown RBP10.06□□□□□ -0.8
CDK5RAP3-214ENST00000579632 CYP4F2P78329 520 aa10.06□□□□□ -0.8
CDK5RAP3-214ENST00000579632 HMGCS1Q01581 520 aa10.06□□□□□ -0.8
CDK5RAP3-214ENST00000579632 ACY1Q03154 408 aa10.06□□□□□ -0.8
CDK5RAP3-214ENST00000579632 TGM3Q08188 693 aa10.06□□□□□ -0.8
CDK5RAP3-214ENST00000579632 MAD2L1Q13257 205 aaPredicted RBP10.06□□□□□ -0.8
CDK5RAP3-214ENST00000579632 AP5B1Q2VPB7 878 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms