RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 KRT6AP02538 564 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 KRT6BP04259 564 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 SLC35G4P0C7Q5 338 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 EBLN1P0CF75 366 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 NQO1P15559 274 aaKnown RBP9.79□□□□□ -0.84
SS18-210ENST00000578700 LBPP18428 481 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 PREPP48147 710 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 KRT6CP48668 564 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 MLLT10P55197 1068 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 ILF3Q12906 894 aaKnown RBP eCLIP9.79□□□□□ -0.84
SS18-210ENST00000578700 KLF10Q13118 480 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 SQLEQ14534 574 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 ATP1A1-AS1Q5TC04 95 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 C6orf163Q5TEZ5 329 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 UNC5DQ6UXZ4 953 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 SPATA19Q7Z5L4 167 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 SYVN1Q86TM6 617 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 ATCAYQ86WG3 371 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 ZNF761Q86XN6 746 aaPredicted RBP9.79□□□□□ -0.84
SS18-210ENST00000578700 NRROSQ86YC3 692 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 VRK3Q8IV63 474 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 NLGN4XQ8N0W4 816 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 CDYL2Q8N8U2 506 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 TEX19Q8NA77 164 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 NLGN4YQ8NFZ3 816 aaPredicted RBP9.79□□□□□ -0.84
SS18-210ENST00000578700 RP9Q8TA86 221 aaKnown RBP9.79□□□□□ -0.84
SS18-210ENST00000578700 APOBEC4Q8WW27 367 aaKnown RBP9.79□□□□□ -0.84
SS18-210ENST00000578700 ESAMQ96AP7 390 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 KIAA1143Q96AT1 154 aaPredicted RBP9.79□□□□□ -0.84
SS18-210ENST00000578700 FBXL8Q96CD0 374 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 SLC29A3Q9BZD2 475 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 MMADHCQ9H3L0 296 aaPredicted RBP9.79□□□□□ -0.84
SS18-210ENST00000578700 PRM3Q9NNZ6 103 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 TRPS1Q9UHF7 1281 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 SUFUQ9UMX1 484 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 G3BP2Q9UN86 482 aaKnown RBP9.79□□□□□ -0.84
SS18-210ENST00000578700 TMEM98Q9Y2Y6 226 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 PCDHGA3Q9Y5H0 932 aa9.79□□□□□ -0.84
SS18-210ENST00000578700 TEP1Q99973 2627 aaKnown RBP9.79□□□□□ -0.84
SS18-210ENST00000578700 CLEC18AA5D8T8 446 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 ZNF839A8K0R7 811 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 PSMD12O00232 456 aaPredicted RBP9.78□□□□□ -0.84
SS18-210ENST00000578700 CHUKO15111 745 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 RGS14O43566 566 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 KDM1AO60341 852 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 FUCA1P04066 466 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 CAPN1P07384 714 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 LINC00032P0C843 101 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 T-ENOLP0DO92 83 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 COX4I1P13073 169 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 IDO1P14902 403 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 TCN2P20062 427 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 TRIM23P36406 574 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 ATP4BP51164 291 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 CDC20Q12834 499 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 STX5Q13190 355 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 MAD2L1Q13257 205 aaPredicted RBP9.78□□□□□ -0.84
SS18-210ENST00000578700 TRA2AQ13595 282 aaKnown RBP eCLIP9.78□□□□□ -0.84
SS18-210ENST00000578700 CYLC2Q14093 348 aaPredicted RBP9.78□□□□□ -0.84
SS18-210ENST00000578700 HERC3Q15034 1050 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 SPRED3Q2MJR0 410 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 PLA2G4EQ3MJ16 856 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 UGT3A2Q3SY77 523 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 ATP6AP1LQ52LC2 224 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 CLEC18BQ6UXF7 455 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 ASRGL1Q7L266 308 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 GALNT13Q8IUC8 556 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 C10orf67Q8IYJ2 551 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 CLEC18CQ8NCF0 446 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 FBXO15Q8NCQ5 510 aaPredicted RBP9.78□□□□□ -0.84
SS18-210ENST00000578700 OR4F6Q8NGB9 312 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 OR4D9Q8NGE8 314 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 DLG3Q92796 817 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 SLC45A3Q96JT2 553 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 KCNA7Q96RP8 456 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 TMEM79Q9BSE2 394 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 NTMT1Q9BV86 223 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 DDA1Q9BW61 102 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 ASPSCR1Q9BZE9 553 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 ZBTB26Q9HCK0 441 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 ACSL5Q9ULC5 683 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 SNX6Q9UNH7 406 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 PLEKHM1Q9Y4G2 1056 aa9.78□□□□□ -0.84
SS18-210ENST00000578700 IGHV1OR21-1A0A087WYE8 117 aa9.77□□□□□ -0.85
SS18-210ENST00000578700 LOC100653049A0A140TA62 436 aa9.77□□□□□ -0.85
SS18-210ENST00000578700 ATP6AP2A0A1C7CYW4 349 aa9.77□□□□□ -0.85
SS18-210ENST00000578700 ARHGEF33A8MVX0 844 aa9.77□□□□□ -0.85
SS18-210ENST00000578700 SLC28A1O00337 649 aa9.77□□□□□ -0.85
SS18-210ENST00000578700 PPP6CO00743 305 aa9.77□□□□□ -0.85
SS18-210ENST00000578700 OR7A17O14581 309 aa9.77□□□□□ -0.85
SS18-210ENST00000578700 CLGNO14967 610 aa9.77□□□□□ -0.85
SS18-210ENST00000578700 CAPN5O15484 640 aaPredicted RBP9.77□□□□□ -0.85
SS18-210ENST00000578700 ULK1O75385 1050 aa9.77□□□□□ -0.85
SS18-210ENST00000578700 ATP6AP2O75787 350 aa9.77□□□□□ -0.85
SS18-210ENST00000578700 CIB2O75838 187 aa9.77□□□□□ -0.85
SS18-210ENST00000578700 KRT34O76011 436 aa9.77□□□□□ -0.85
SS18-210ENST00000578700 AGFG2O95081 481 aa9.77□□□□□ -0.85
SS18-210ENST00000578700 C1orf105O95561 183 aa9.77□□□□□ -0.85
SS18-210ENST00000578700 JUNP05412 331 aaKnown RBP9.77□□□□□ -0.85
SS18-210ENST00000578700 CEACAM5P06731 702 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms