RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 SCELO95171 688 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 NTRK1P04629 796 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 ALPLP05186 524 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 THBDP07204 575 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 EBLN1P0CF75 366 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 AGXTP21549 392 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 PBLDP30039 288 aaPredicted RBP5.18□□□□□ -1.58
VAPA-203ENST00000577539 NSG1P42857 185 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 ARHGDIAP52565 204 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 RAD23AP54725 363 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 C21orf59P57076 290 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 SNRPD1P62314 119 aaKnown RBP5.18□□□□□ -1.58
VAPA-203ENST00000577539 ADARB1P78563 741 aaKnown RBP5.18□□□□□ -1.58
VAPA-203ENST00000577539 ABRQ12979 859 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 ATP1A4Q13733 1029 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 PON2Q15165 354 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 ANKDD1AQ495B1 522 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 DGKKQ5KSL6 1271 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 ZNF773Q6PK81 442 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 GLB1L3Q8NCI6 653 aaPredicted RBP5.18□□□□□ -1.58
VAPA-203ENST00000577539 PAPD5Q8NDF8 572 aaKnown RBP5.18□□□□□ -1.58
VAPA-203ENST00000577539 ZNF548Q8NEK5 533 aaPredicted RBP5.18□□□□□ -1.58
VAPA-203ENST00000577539 OR2AP1Q8NGE2 309 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 NETO1Q8TDF5 533 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 GIPC3Q8TF64 312 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 ELMO1Q92556 727 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 SCAMP4Q969E2 229 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 MED8Q96G25 268 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 PANX1Q96RD7 426 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 HTATIP2Q9BUP3 242 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 VN1R3Q9BXE9 311 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 SLC6A13Q9NSD5 602 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 SLC25A37Q9NYZ2 338 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 AASSQ9UDR5 926 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 SLCO3A1Q9UIG8 710 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 C3orf18Q9UK00 162 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 VPS4AQ9UN37 437 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 SNX6Q9UNH7 406 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 SPEF1Q9Y4P9 236 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 BACE2Q9Y5Z0 518 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 H0YAE9 185 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 ANKRD28O15084 1053 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 XPNPEP2O43895 674 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 MITFO75030 526 aaPredicted RBP5.18□□□□□ -1.58
VAPA-203ENST00000577539 LRG1P02750 347 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 AQP1P29972 269 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 CCR7P32248 378 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 GALNSP34059 522 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 GPR3P46089 330 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 MAP2K3P46734 347 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 ZXDBP98169 803 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 SRSF11Q05519 484 aaKnown RBP5.18□□□□□ -1.58
VAPA-203ENST00000577539 CHIT1Q13231 466 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 DGCR6Q14129 220 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 GPR33Q49SQ1 333 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 TMEM240Q5SV17 173 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 ZNF648Q5T619 568 aaPredicted RBP5.18□□□□□ -1.58
VAPA-203ENST00000577539 GPRC6AQ5T6X5 926 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 ANKRD26P1Q6NSI1 321 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 CRTC1Q6UUV9 634 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 SERPINA13PQ6UXR4 307 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 PRR23BQ6ZRT6 265 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 GPR155Q7Z3F1 870 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 ZC3H7AQ8IWR0 971 aaKnown RBP5.18□□□□□ -1.58
VAPA-203ENST00000577539 BEND7Q8N7W2 519 aaPredicted RBP5.18□□□□□ -1.58
VAPA-203ENST00000577539 ARL10Q8N8L6 244 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 DRAXINQ8NBI3 349 aaPredicted RBP5.18□□□□□ -1.58
VAPA-203ENST00000577539 MCOLN3Q8TDD5 553 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 SNX19Q92543 992 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 TPD52L3Q96J77 140 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 DEFB118Q96PH6 123 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 MTERF1Q99551 399 aaKnown RBP5.18□□□□□ -1.58
VAPA-203ENST00000577539 RBM4BQ9BQ04 359 aaKnown RBP5.18□□□□□ -1.58
VAPA-203ENST00000577539 RBM4Q9BWF3 364 aaKnown RBP5.18□□□□□ -1.58
VAPA-203ENST00000577539 ACPTQ9BZG2 426 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 SLC32A1Q9H598 525 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 FAM118AQ9NWS6 357 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 KIF17Q9P2E2 1029 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 PDE10AQ9Y233 779 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 INSL5Q9Y5Q6 135 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 VWA8A3KMH1 1905 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 GAPDHSO14556 408 aaPredicted RBP5.18□□□□□ -1.58
VAPA-203ENST00000577539 PER2O15055 1255 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 OIP5O43482 229 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 SOD2P04179 222 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 ABCB1P08183 1280 aaPredicted RBP5.18□□□□□ -1.58
VAPA-203ENST00000577539 COX7A2P14406 83 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 RAC2P15153 192 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 CD9P21926 228 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 MATN1P21941 496 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 ALDH4A1P30038 563 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 PIGAP37287 484 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 KIR3DL1P43629 444 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 PSMD7P51665 324 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 CASP9P55211 416 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 CD47Q08722 323 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 NOGQ13253 232 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 LYPLAL1Q5VWZ2 237 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 TPGS2Q68CL5 300 aa5.18□□□□□ -1.58
VAPA-203ENST00000577539 HORMAD1Q86X24 394 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms