RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 IQCB1Q15051 598 aa15.25■□□□□ 0.03
CTDNEP1-211ENST00000575783 GXYLT1Q4G148 440 aa15.25■□□□□ 0.03
CTDNEP1-211ENST00000575783 ICE2Q659A1 982 aa15.25■□□□□ 0.03
CTDNEP1-211ENST00000575783 OR52K1Q8NGK4 314 aa15.25■□□□□ 0.03
CTDNEP1-211ENST00000575783 OR9A1PQ8NGU1 263 aa15.25■□□□□ 0.03
CTDNEP1-211ENST00000575783 C16orf52Q8NHV5 167 aa15.25■□□□□ 0.03
CTDNEP1-211ENST00000575783 SPATA3Q8NHX4 192 aa15.25■□□□□ 0.03
CTDNEP1-211ENST00000575783 ELP5Q8TE02 316 aa15.25■□□□□ 0.03
CTDNEP1-211ENST00000575783 TSLPQ969D9 159 aa15.25■□□□□ 0.03
CTDNEP1-211ENST00000575783 CCDC42Q96M95 316 aa15.25■□□□□ 0.03
CTDNEP1-211ENST00000575783 ZNF778Q96MU6 729 aa15.25■□□□□ 0.03
CTDNEP1-211ENST00000575783 PANX3Q96QZ0 392 aa15.25■□□□□ 0.03
CTDNEP1-211ENST00000575783 CHP1Q99653 195 aa15.25■□□□□ 0.03
CTDNEP1-211ENST00000575783 PNPLA3Q9NST1 481 aa15.25■□□□□ 0.03
CTDNEP1-211ENST00000575783 ZNHIT6Q9NWK9 470 aaKnown RBP15.25■□□□□ 0.03
CTDNEP1-211ENST00000575783 CRIM1Q9NZV1 1036 aa15.25■□□□□ 0.03
CTDNEP1-211ENST00000575783 ANAPC5Q9UJX4 755 aa15.25■□□□□ 0.03
CTDNEP1-211ENST00000575783 DUSP10Q9Y6W6 482 aa15.25■□□□□ 0.03
CTDNEP1-211ENST00000575783 COL6A5A8TX70 2615 aa15.24■□□□□ 0.03
CTDNEP1-211ENST00000575783 CDK2AP1O14519 115 aa15.24■□□□□ 0.03
CTDNEP1-211ENST00000575783 ZFP36L2P47974 494 aaKnown RBP15.24■□□□□ 0.03
CTDNEP1-211ENST00000575783 MLF1P58340 268 aa15.24■□□□□ 0.03
CTDNEP1-211ENST00000575783 PRAMEP78395 509 aa15.24■□□□□ 0.03
CTDNEP1-211ENST00000575783 RHAGQ02094 409 aa15.24■□□□□ 0.03
CTDNEP1-211ENST00000575783 KEAP1Q14145 624 aa15.24■□□□□ 0.03
CTDNEP1-211ENST00000575783 DEFB113Q30KQ7 82 aa15.24■□□□□ 0.03
CTDNEP1-211ENST00000575783 ANKRD20A4Q4UJ75 823 aa15.24■□□□□ 0.03
CTDNEP1-211ENST00000575783 TSTD2Q5T7W7 516 aa15.24■□□□□ 0.03
CTDNEP1-211ENST00000575783 ZNF585AQ6P3V2 769 aa15.24■□□□□ 0.03
CTDNEP1-211ENST00000575783 LIX1LQ8IVB5 337 aa15.24■□□□□ 0.03
CTDNEP1-211ENST00000575783 CYP4X1Q8N118 509 aa15.24■□□□□ 0.03
CTDNEP1-211ENST00000575783 FAM71DQ8N9W8 422 aa15.24■□□□□ 0.03
CTDNEP1-211ENST00000575783 PPFIBP2Q8ND30 876 aa15.24■□□□□ 0.03
CTDNEP1-211ENST00000575783 PLPP5Q8NEB5 264 aa15.24■□□□□ 0.03
CTDNEP1-211ENST00000575783 OR8K1Q8NGG5 319 aa15.24■□□□□ 0.03
CTDNEP1-211ENST00000575783 MRFAP1L1Q96HT8 127 aa15.24■□□□□ 0.03
CTDNEP1-211ENST00000575783 TRIM45Q9H8W5 580 aaPredicted RBP15.24■□□□□ 0.03
CTDNEP1-211ENST00000575783 PLSCR2Q9NRY7 297 aa15.24■□□□□ 0.03
CTDNEP1-211ENST00000575783 FN1P02751 2386 aaKnown RBP15.24■□□□□ 0.03
CTDNEP1-211ENST00000575783 SCN2AQ99250 2005 aa15.23■□□□□ 0.03
CTDNEP1-211ENST00000575783 A0A0G2JNJ9 132 aa15.23■□□□□ 0.03
CTDNEP1-211ENST00000575783 ARHGEF33A8MVX0 844 aa15.23■□□□□ 0.03
CTDNEP1-211ENST00000575783 H7BY64 318 aa15.23■□□□□ 0.03
CTDNEP1-211ENST00000575783 KPNA5O15131 536 aa15.23■□□□□ 0.03
CTDNEP1-211ENST00000575783 RDH16O75452 317 aa15.23■□□□□ 0.03
CTDNEP1-211ENST00000575783 CCNDBP1O95273 360 aa15.23■□□□□ 0.03
CTDNEP1-211ENST00000575783 GAS8O95995 478 aa15.23■□□□□ 0.03
CTDNEP1-211ENST00000575783 HEXAP06865 529 aa15.23■□□□□ 0.03
CTDNEP1-211ENST00000575783 ACVR2AP27037 513 aa15.23■□□□□ 0.03
CTDNEP1-211ENST00000575783 PCSK6P29122 969 aa15.23■□□□□ 0.03
CTDNEP1-211ENST00000575783 TRHRP34981 398 aaPredicted RBP15.23■□□□□ 0.03
CTDNEP1-211ENST00000575783 TPM4P67936 248 aa15.23■□□□□ 0.03
CTDNEP1-211ENST00000575783 RELAQ04206 551 aa15.23■□□□□ 0.03
CTDNEP1-211ENST00000575783 TCEAL1Q15170 157 aa15.23■□□□□ 0.03
CTDNEP1-211ENST00000575783 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.23■□□□□ 0.03
CTDNEP1-211ENST00000575783 AARS2Q5JTZ9 985 aaKnown RBP15.23■□□□□ 0.03
CTDNEP1-211ENST00000575783 FBXW10Q5XX13 1052 aa15.23■□□□□ 0.03
CTDNEP1-211ENST00000575783 PAOXQ6QHF9 649 aa15.23■□□□□ 0.03
CTDNEP1-211ENST00000575783 CLEC17AQ6ZS10 378 aa15.23■□□□□ 0.03
CTDNEP1-211ENST00000575783 CHSY3Q70JA7 882 aa15.23■□□□□ 0.03
CTDNEP1-211ENST00000575783 CXXC5Q7LFL8 322 aaKnown RBP15.23■□□□□ 0.03
CTDNEP1-211ENST00000575783 WDR53Q7Z5U6 358 aaPredicted RBP15.23■□□□□ 0.03
CTDNEP1-211ENST00000575783 ZCCHC10Q8TBK6 192 aa15.23■□□□□ 0.03
CTDNEP1-211ENST00000575783 PEX11GQ96HA9 241 aa15.23■□□□□ 0.03
CTDNEP1-211ENST00000575783 PRAP1Q96NZ9 151 aa15.23■□□□□ 0.03
CTDNEP1-211ENST00000575783 TTYH2Q9BSA4 534 aa15.23■□□□□ 0.03
CTDNEP1-211ENST00000575783 OSBPL8Q9BZF1 889 aa15.23■□□□□ 0.03
CTDNEP1-211ENST00000575783 ZNF395Q9H8N7 513 aaPredicted RBP15.23■□□□□ 0.03
CTDNEP1-211ENST00000575783 NHEJ1Q9H9Q4 299 aaPredicted RBP15.23■□□□□ 0.03
CTDNEP1-211ENST00000575783 MARCH4Q9P2E8 410 aaPredicted RBP15.23■□□□□ 0.03
CTDNEP1-211ENST00000575783 Q9UFV3 132 aa15.23■□□□□ 0.03
CTDNEP1-211ENST00000575783 CSPG4Q6UVK1 2322 aa15.23■□□□□ 0.03
CTDNEP1-211ENST00000575783 A6NNC1 897 aa15.22■□□□□ 0.03
CTDNEP1-211ENST00000575783 MAGEB17A8MXT2 336 aa15.22■□□□□ 0.03
CTDNEP1-211ENST00000575783 FCHO1O14526 889 aa15.22■□□□□ 0.03
CTDNEP1-211ENST00000575783 PJA2O43164 708 aa15.22■□□□□ 0.03
CTDNEP1-211ENST00000575783 PSMD3O43242 534 aa15.22■□□□□ 0.03
CTDNEP1-211ENST00000575783 RAF1P04049 648 aa15.22■□□□□ 0.03
CTDNEP1-211ENST00000575783 GLI4P10075 376 aa15.22■□□□□ 0.03
CTDNEP1-211ENST00000575783 HOXC12P31275 282 aa15.22■□□□□ 0.03
CTDNEP1-211ENST00000575783 UQCRC1P31930 480 aa15.22■□□□□ 0.03
CTDNEP1-211ENST00000575783 PNLIPRP1P54315 467 aa15.22■□□□□ 0.03
CTDNEP1-211ENST00000575783 COPS2P61201 443 aa15.22■□□□□ 0.03
CTDNEP1-211ENST00000575783 PAMR1Q6UXH9 720 aa15.22■□□□□ 0.03
CTDNEP1-211ENST00000575783 B3GNT6Q6ZMB0 384 aa15.22■□□□□ 0.03
CTDNEP1-211ENST00000575783 MDGA2Q7Z553 956 aa15.22■□□□□ 0.03
CTDNEP1-211ENST00000575783 LINC00523Q86TU6 105 aa15.22■□□□□ 0.03
CTDNEP1-211ENST00000575783 ZFP62Q8NB50 900 aaPredicted RBP15.22■□□□□ 0.03
CTDNEP1-211ENST00000575783 FAM136AQ96C01 138 aa15.22■□□□□ 0.03
CTDNEP1-211ENST00000575783 CCDC138Q96M89 665 aa15.22■□□□□ 0.03
CTDNEP1-211ENST00000575783 PKP4Q99569 1192 aa15.22■□□□□ 0.03
CTDNEP1-211ENST00000575783 DNAJC7Q99615 494 aa15.22■□□□□ 0.03
CTDNEP1-211ENST00000575783 EBNA1BP2Q99848 306 aaKnown RBP15.22■□□□□ 0.03
CTDNEP1-211ENST00000575783 ANKHQ9HCJ1 492 aa15.22■□□□□ 0.03
CTDNEP1-211ENST00000575783 CATSPERZQ9NTU4 200 aa15.22■□□□□ 0.03
CTDNEP1-211ENST00000575783 IFNKQ9P0W0 207 aa15.22■□□□□ 0.03
CTDNEP1-211ENST00000575783 STAB1Q9NY15 2570 aa15.22■□□□□ 0.03
CTDNEP1-211ENST00000575783 ZNF860A6NHJ4 632 aa15.21■□□□□ 0.03
CTDNEP1-211ENST00000575783 FAM166BA8MTA8 275 aa15.21■□□□□ 0.03
CTDNEP1-211ENST00000575783 SLC16A5O15375 505 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms