RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 MAN2B2Q9Y2E5 1009 aa8.23□□□□□ -1.09
SMG6-216ENST00000575176 PTRH2Q9Y3E5 179 aaKnown RBP8.23□□□□□ -1.09
SMG6-216ENST00000575176 PCDHGA9Q9Y5G4 932 aaKnown RBP8.23□□□□□ -1.09
SMG6-216ENST00000575176 LOC102723996A0A087X1L8 192 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 A0A096LPK6 155 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 A0A1B0GTL3 188 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 NCF1BA6NI72 391 aaPredicted RBP8.22□□□□□ -1.09
SMG6-216ENST00000575176 ARGFXA6NJG6 315 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 NCF1CA8MVU1 366 aaPredicted RBP8.22□□□□□ -1.09
SMG6-216ENST00000575176 SUV39H1O43463 412 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 WFS1O76024 890 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 SORBS2O94875 1100 aaKnown RBP8.22□□□□□ -1.09
SMG6-216ENST00000575176 EIF2S1P05198 315 aaKnown RBP8.22□□□□□ -1.09
SMG6-216ENST00000575176 ANXA5P08758 320 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 LTA4HP09960 611 aaKnown RBP8.22□□□□□ -1.09
SMG6-216ENST00000575176 ZGLP1P0C6A0 271 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 COX6A1P12074 109 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 NCF1P14598 390 aaPredicted RBP8.22□□□□□ -1.09
SMG6-216ENST00000575176 IL1RNP18510 177 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 AGXTP21549 392 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 HNRNPH1P31943 449 aaKnown RBP8.22□□□□□ -1.09
SMG6-216ENST00000575176 FOLR3P41439 243 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 CCR10P46092 362 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 HSPA7P48741 367 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 CCR8P51685 355 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 CDC16Q13042 620 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 NAA30Q147X3 362 aaPredicted RBP8.22□□□□□ -1.09
SMG6-216ENST00000575176 DCAF10Q5QP82 559 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 THEMIS2Q5TEJ8 643 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 MLIPQ5VWP3 458 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 ATG9BQ674R7 924 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 TCTN3Q6NUS6 607 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 TMEM205Q6UW68 189 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 MED25Q71SY5 747 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 TMPRSS11BQ86T26 416 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 ASPGQ86U10 573 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 EIF1ADQ8N9N8 165 aaKnown RBP8.22□□□□□ -1.09
SMG6-216ENST00000575176 Q8NA96 180 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 FDCSPQ8NFU4 85 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 OR11G2Q8NGC1 345 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 OR5T3Q8NGG3 340 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 RHEBL1Q8TAI7 183 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 ATL1Q8WXF7 558 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 C17orf62Q9BQA9 187 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 ING2Q9H160 280 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 EHD1Q9H4M9 534 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 KLHL31Q9H511 634 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 SOX17Q9H6I2 414 aaPredicted RBP8.22□□□□□ -1.09
SMG6-216ENST00000575176 ZNF304Q9HCX3 659 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 TXLNGQ9NUQ3 528 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 P4HTMQ9NXG6 502 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 NUDT4Q9NZJ9 180 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 MTRF1LQ9UGC7 380 aaKnown RBP8.22□□□□□ -1.09
SMG6-216ENST00000575176 ZNF490Q9ULM2 529 aaPredicted RBP8.22□□□□□ -1.09
SMG6-216ENST00000575176 MAP4K5Q9Y4K4 846 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 SLC22A7Q9Y694 548 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 HECTD1Q9ULT8 2610 aa8.22□□□□□ -1.09
SMG6-216ENST00000575176 USP9YO00507 2555 aaPredicted RBP8.21□□□□□ -1.09
SMG6-216ENST00000575176 OR2W5A6NFC9 320 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 B8ZZF3 427 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 H0YIG0 161 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 TGFBR3LH3BV60 316 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 AGPSO00116 658 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 E2F3O00716 465 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 MAP3K7O43318 606 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 GALR3O60755 368 aaPredicted RBP8.21□□□□□ -1.1
SMG6-216ENST00000575176 RDH16O75452 317 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 IPO13O94829 963 aaKnown RBP8.21□□□□□ -1.1
SMG6-216ENST00000575176 WDR47O94967 919 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 KLHL2O95198 593 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 BMP10O95393 424 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 SHBGP04278 402 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 CELA2AP08217 269 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 HIST1H2AGP0C0S8 130 aaPredicted RBP8.21□□□□□ -1.1
SMG6-216ENST00000575176 HIST1H2ADP20671 130 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 FBLP22087 321 aaKnown RBP8.21□□□□□ -1.1
SMG6-216ENST00000575176 ALAS2P22557 587 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 CRABP2P29373 138 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 OTX2P32243 289 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 AHRP35869 848 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 CASP2P42575 452 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 SERPINB8P50452 374 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 RHAGQ02094 409 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 NFATC3Q12968 1075 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 PWP1Q13610 501 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 SLBPQ14493 270 aaKnown RBP eCLIP8.21□□□□□ -1.1
SMG6-216ENST00000575176 SSPNQ14714 243 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 SETDB1Q15047 1291 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 PCOLCEQ15113 449 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 FAM214AQ32MH5 1076 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 COLEC12Q5KU26 742 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 ADGRD1Q6QNK2 874 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 LRRC70Q7Z2Q7 622 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 ADCK2Q7Z695 626 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 GPSM1Q86YR5 675 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 C9orf43Q8TAL5 461 aaPredicted RBP8.21□□□□□ -1.1
SMG6-216ENST00000575176 UHMK1Q8TAS1 419 aaKnown RBP8.21□□□□□ -1.1
SMG6-216ENST00000575176 ZCCHC10Q8TBK6 192 aa8.21□□□□□ -1.1
SMG6-216ENST00000575176 UTP15Q8TED0 518 aaKnown RBP8.21□□□□□ -1.1
SMG6-216ENST00000575176 PSMF1Q92530 271 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms