RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 OR1N1Q8NGS0 311 aa9.14□□□□□ -0.95
NPLOC4-212ENST00000573328 OR51Q1Q8NH59 317 aa9.14□□□□□ -0.95
NPLOC4-212ENST00000573328 SLC13A3Q8WWT9 602 aa9.14□□□□□ -0.95
NPLOC4-212ENST00000573328 TSNARE1Q96NA8 513 aa9.14□□□□□ -0.95
NPLOC4-212ENST00000573328 OLFM1Q99784 485 aa9.14□□□□□ -0.95
NPLOC4-212ENST00000573328 SGPP1Q9BX95 441 aa9.14□□□□□ -0.95
NPLOC4-212ENST00000573328 RBCK1Q9BYM8 510 aa9.14□□□□□ -0.95
NPLOC4-212ENST00000573328 VN1R1Q9GZP7 353 aa9.14□□□□□ -0.95
NPLOC4-212ENST00000573328 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.14□□□□□ -0.95
NPLOC4-212ENST00000573328 NSMCE4AQ9NXX6 385 aa9.14□□□□□ -0.95
NPLOC4-212ENST00000573328 PYCARDQ9ULZ3 195 aa9.14□□□□□ -0.95
NPLOC4-212ENST00000573328 NTNG1Q9Y2I2 539 aa9.14□□□□□ -0.95
NPLOC4-212ENST00000573328 VWA7Q9Y334 891 aa9.14□□□□□ -0.95
NPLOC4-212ENST00000573328 DYRK1BQ9Y463 629 aa9.14□□□□□ -0.95
NPLOC4-212ENST00000573328 DIDO1Q9BTC0 2240 aaKnown RBP9.14□□□□□ -0.95
NPLOC4-212ENST00000573328 KCNE1BA0A087WTH5 132 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 NPEPPSL1A6NEC2 478 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 LCMT2O60294 686 aaKnown RBP9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 CDC123O75794 336 aaPredicted RBP9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 SEC24DO94855 1032 aaPredicted RBP9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 BMP10O95393 424 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 CBX6O95503 412 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 TSPAN12O95859 305 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 F10P00742 488 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 ENO2P09104 434 aaPredicted RBP9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 ITGAMP11215 1152 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 ICAM2P13598 275 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 ZNF37AP17032 561 aaPredicted RBP9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 TSFMP43897 325 aaKnown RBP9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 SLC12A2P55011 1212 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 SNRPNP63162 240 aaKnown RBP9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 SKP1P63208 163 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 ZNF33BQ06732 778 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 RGS1Q08116 209 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 CALCOCO2Q13137 446 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 CSHL1Q14406 222 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 ZNF460Q14592 562 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 FASTKD3Q14CZ7 662 aaKnown RBP9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 PCOLCEQ15113 449 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 BTBD16Q32M84 506 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 ABHD17BQ5VST6 288 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 TMEM214Q6NUQ4 689 aaKnown RBP9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 RIPOR1Q6ZS17 1223 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 LANCL3Q6ZV70 420 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 TMPRSS11BQ86T26 416 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 ARHGEF39Q8N4T4 335 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 NKAPQ8N5F7 415 aaKnown RBP9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 MFSD9Q8NBP5 474 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 BBOF1Q8ND07 529 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 SUN3Q8TAQ9 357 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 GRHL3Q8TE85 626 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 SLC5A11Q8WWX8 675 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 FBXL8Q96CD0 374 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 PEX11GQ96HA9 241 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 VPS39Q96JC1 886 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 C5orf34Q96MH7 638 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 PSMG3-AS1Q96PY0 264 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 LMF1Q96S06 567 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 WDR83Q9BRX9 315 aaKnown RBP9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 TUBB6Q9BUF5 446 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 FAM129AQ9BZQ8 928 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 ZNF700Q9H0M5 742 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 DPH5Q9H2P9 285 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 PLAC1Q9HBJ0 212 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 PLA2G3Q9NZ20 509 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 TXNDC16Q9P2K2 825 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 PLEKHB1Q9UF11 243 aaPredicted RBP9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 SNX24Q9Y343 169 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 NAALAD2Q9Y3Q0 740 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 PSAT1Q9Y617 370 aa9.13□□□□□ -0.95
NPLOC4-212ENST00000573328 LOC102723996A0A087X1L8 192 aa9.12□□□□□ -0.95
NPLOC4-212ENST00000573328 TRAV17A0A0B4J275 112 aa9.12□□□□□ -0.95
NPLOC4-212ENST00000573328 IGHV3-20A0A0C4DH32 117 aa9.12□□□□□ -0.95
NPLOC4-212ENST00000573328 TRBC2A0A5B9 178 aa9.12□□□□□ -0.95
NPLOC4-212ENST00000573328 CDC7O00311 574 aa9.12□□□□□ -0.95
NPLOC4-212ENST00000573328 DDAH2O95865 285 aa9.12□□□□□ -0.95
NPLOC4-212ENST00000573328 NPPBP16860 134 aa9.12□□□□□ -0.95
NPLOC4-212ENST00000573328 SOX11P35716 441 aa9.12□□□□□ -0.95
NPLOC4-212ENST00000573328 RPL21P46778 160 aaKnown RBP9.12□□□□□ -0.95
NPLOC4-212ENST00000573328 MRPS25P82663 173 aaKnown RBP9.12□□□□□ -0.95
NPLOC4-212ENST00000573328 HERC3Q15034 1050 aa9.12□□□□□ -0.95
NPLOC4-212ENST00000573328 CATSPEREQ5SY80 951 aa9.12□□□□□ -0.95
NPLOC4-212ENST00000573328 TMEM205Q6UW68 189 aa9.12□□□□□ -0.95
NPLOC4-212ENST00000573328 SBSNQ6UWP8 590 aa9.12□□□□□ -0.95
NPLOC4-212ENST00000573328 ABHD13Q7L211 337 aa9.12□□□□□ -0.95
NPLOC4-212ENST00000573328 CPEB2Q7Z5Q1 589 aaKnown RBP9.12□□□□□ -0.95
NPLOC4-212ENST00000573328 ZC3HC1Q86WB0 502 aaKnown RBP9.12□□□□□ -0.95
NPLOC4-212ENST00000573328 BCORP1Q8N888 145 aa9.12□□□□□ -0.95
NPLOC4-212ENST00000573328 ST6GALNAC3Q8NDV1 305 aa9.12□□□□□ -0.95
NPLOC4-212ENST00000573328 CATSPER1Q8NEC5 780 aa9.12□□□□□ -0.95
NPLOC4-212ENST00000573328 OR56A3Q8NH54 315 aa9.12□□□□□ -0.95
NPLOC4-212ENST00000573328 PYROXD1Q8WU10 500 aa9.12□□□□□ -0.95
NPLOC4-212ENST00000573328 CDKL2Q92772 493 aa9.12□□□□□ -0.95
NPLOC4-212ENST00000573328 NEIL2Q969S2 332 aa9.12□□□□□ -0.95
NPLOC4-212ENST00000573328 TM4SF19Q96DZ7 209 aa9.12□□□□□ -0.95
NPLOC4-212ENST00000573328 CYTH2Q99418 400 aa9.12□□□□□ -0.95
NPLOC4-212ENST00000573328 GPAMQ9HCL2 828 aa9.12□□□□□ -0.95
NPLOC4-212ENST00000573328 PRM3Q9NNZ6 103 aa9.12□□□□□ -0.95
NPLOC4-212ENST00000573328 SAYSD1Q9NPB0 183 aa9.12□□□□□ -0.95
NPLOC4-212ENST00000573328 OLAHQ9NV23 265 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms