RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 HAT1O14929 419 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 ZNHIT1O43257 154 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 NDUFS3O75489 264 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 ERGP11308 486 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 COX6A1P12074 109 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 STIP1P31948 543 aaKnown RBP8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 KIR3DL1P43629 444 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 RNF4P78317 190 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 CCZ1BP86790 482 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 CCZ1P86791 482 aaPredicted RBP8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 PMP22Q01453 160 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 CTBP1Q13363 440 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 TMED2Q15363 201 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 RPS6KA1Q15418 735 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 RBBP7Q16576 425 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 TYSND1Q2T9J0 566 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 KLHL38Q2WGJ6 581 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 LYPLAL1Q5VWZ2 237 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 FBXO42Q6P3S6 717 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 IGFL3Q6UXB1 125 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 LANCL3Q6ZV70 420 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 PIWIL4Q7Z3Z4 852 aaKnown RBP8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 PAQR7Q86WK9 346 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 ARHGEF39Q8N4T4 335 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 SIRT6Q8N6T7 355 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 AMER3Q8N944 861 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 STT3BQ8TCJ2 826 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 BRIX1Q8TDN6 353 aaKnown RBP8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 GRHL3Q8TE85 626 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 UBE2Q2Q8WVN8 375 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 FKBP10Q96AY3 582 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 ZNF669Q96BR6 464 aaPredicted RBP8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 LRRC45Q96CN5 670 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 Q96M66 194 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 FER1L6-AS2Q96M78 137 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 TAAR6Q96RI8 345 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 PKP4Q99569 1192 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 BARD1Q99728 777 aaKnown RBP8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 WDR77Q9BQA1 342 aaPredicted RBP8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 CRB3Q9BUF7 120 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 KIFC1Q9BW19 673 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 EIF2B3Q9NR50 452 aaKnown RBP8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 TAC3Q9UHF0 121 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 PCDHB10Q9UN67 800 aa8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 RUVBL1Q9Y265 456 aaKnown RBP8.77□□□□□ -1.01
NPLOC4-210ENST00000572824 POLQO75417 2590 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 CTAGE15A4D2H0 777 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 WIPF3A6NGB9 483 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 FOXS1O43638 330 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 KIF5CO60282 957 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 CEP104O60308 925 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 MATN4O95460 622 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 ONECUT2O95948 504 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 ZGLP1P0C6A0 271 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 PRF1P14222 555 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 SLC1A2P43004 574 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 TTPAP49638 278 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 CLCN7P51798 805 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 KCNK10P57789 538 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 TIAL1Q01085 375 aaKnown RBP eCLIP8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 PLOD1Q02809 727 aaPredicted RBP8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 GPS1Q13098 491 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 AIMP2Q13155 320 aaKnown RBP8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 GRM7Q14831 915 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 CCNG2Q16589 344 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 PRTGQ2VWP7 1150 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 BBS9Q3SYG4 887 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 TUBB8Q3ZCM7 444 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 ZNF470Q6ECI4 717 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 NLRP9Q7RTR0 991 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 OTOAQ7RTW8 1153 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 CTAGE6Q86UF2 777 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 KCNMB4Q86W47 210 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 ZC3H7AQ8IWR0 971 aaKnown RBP8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 LRRC56Q8IYG6 542 aaPredicted RBP8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 RNF10Q8N5U6 811 aaKnown RBP8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 TTC29Q8NA56 475 aaPredicted RBP8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 ZNF480Q8WV37 535 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 PSMF1Q92530 271 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 DLG3Q92796 817 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 CABS1Q96KC9 395 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 SLC26A1Q9H2B4 701 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 C5AR2Q9P296 337 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 PCYOX1Q9UHG3 505 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 ANAPC5Q9UJX4 755 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 C3orf18Q9UK00 162 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 ADAMTS6Q9UKP5 1117 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 OSGIN2Q9Y236 505 aa8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 COPG1Q9Y678 874 aaKnown RBP8.76□□□□□ -1.01
NPLOC4-210ENST00000572824 APCP25054 2843 aa8.75□□□□□ -1.01
NPLOC4-210ENST00000572824 A0A0A6YYC8 382 aaPredicted RBP8.75□□□□□ -1.01
NPLOC4-210ENST00000572824 ZCWPW2A0A1B0GU75 182 aa8.75□□□□□ -1.01
NPLOC4-210ENST00000572824 I3L1I5 382 aaPredicted RBP8.75□□□□□ -1.01
NPLOC4-210ENST00000572824 MYO1CO00159 1063 aa8.75□□□□□ -1.01
NPLOC4-210ENST00000572824 ZG16O60844 167 aa8.75□□□□□ -1.01
NPLOC4-210ENST00000572824 DNAJB6O75190 326 aa8.75□□□□□ -1.01
NPLOC4-210ENST00000572824 PSIP1O75475 530 aaKnown RBP8.75□□□□□ -1.01
NPLOC4-210ENST00000572824 SLC16A8O95907 504 aa8.75□□□□□ -1.01
NPLOC4-210ENST00000572824 GAS8O95995 478 aa8.75□□□□□ -1.01
NPLOC4-210ENST00000572824 ITGAMP11215 1152 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms