RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 SPDYAQ5MJ70 313 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 STPG1Q5TH74 334 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 Q6ZSR9 355 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 PRSS42Q7Z5A4 293 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 ALYREFQ86V81 257 aaKnown RBP14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 CARFQ8N187 725 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 ANKS4BQ8N8V4 417 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 CEP70Q8NHQ1 597 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 THAP11Q96EK4 314 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 PPP3R2Q96LZ3 170 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 FCRL4Q96PJ5 515 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 GFM1Q96RP9 751 aaKnown RBP14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 CDC6Q99741 560 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 DPYSL5Q9BPU6 564 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 BRF2Q9HAW0 419 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 ZFP69BQ9UJL9 534 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 COL5A1P20908 1838 aaPredicted RBP14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 IGHV5-51A0A0C4DH38 117 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 LSM1O15116 133 aaKnown RBP14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 MAP3K7O43318 606 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 CBFA2T3O75081 653 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 CLEC3AO75596 197 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 ZBTB11O95625 1053 aaPredicted RBP14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 TGFB1P01137 390 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 GP1BAP07359 652 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 LBPP18428 481 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 HOXD11P31277 338 aaPredicted RBP14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 ARL4DP49703 201 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 ACADVLP49748 655 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 TUBB3Q13509 450 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 CLPPQ16740 277 aaPredicted RBP14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 DEFB110Q30KQ9 67 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 TMEM71Q6P5X7 295 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 LARP4Q71RC2 724 aaKnown RBP eCLIP14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 CMTM7Q96FZ5 175 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 TCTN2Q96GX1 697 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 SERPINI1Q99574 410 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 MS4A8Q9BY19 250 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 LRTM1Q9HBL6 345 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 NMRK1Q9NWW6 199 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 HEY2Q9UBP5 337 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 PILRAQ9UKJ1 303 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 G3BP2Q9UN86 482 aaKnown RBP14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 CCL27Q9Y4X3 112 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 AP1M2Q9Y6Q5 423 aa14.75□□□□□ -0.05
HERPUD1-219ENST00000570273 A8MU76 341 aa14.74□□□□□ -0.05
HERPUD1-219ENST00000570273 NDUFS4O43181 175 aa14.74□□□□□ -0.05
HERPUD1-219ENST00000570273 SNRNP200O75643 2136 aaKnown RBP14.74□□□□□ -0.05
HERPUD1-219ENST00000570273 ETHE1O95571 254 aa14.74□□□□□ -0.05
HERPUD1-219ENST00000570273 PRR35P0CG20 571 aa14.74□□□□□ -0.05
HERPUD1-219ENST00000570273 SEPHS1P49903 392 aa14.74□□□□□ -0.05
HERPUD1-219ENST00000570273 RPL38P63173 70 aaKnown RBP14.74□□□□□ -0.05
HERPUD1-219ENST00000570273 RELAQ04206 551 aa14.74□□□□□ -0.05
HERPUD1-219ENST00000570273 AP5B1Q2VPB7 878 aa14.74□□□□□ -0.05
HERPUD1-219ENST00000570273 TMEM198Q66K66 360 aa14.74□□□□□ -0.05
HERPUD1-219ENST00000570273 FBXO42Q6P3S6 717 aa14.74□□□□□ -0.05
HERPUD1-219ENST00000570273 VN1R4Q7Z5H5 301 aa14.74□□□□□ -0.05
HERPUD1-219ENST00000570273 ASPGQ86U10 573 aa14.74□□□□□ -0.05
HERPUD1-219ENST00000570273 ZFAND4Q86XD8 727 aa14.74□□□□□ -0.05
HERPUD1-219ENST00000570273 FNDC5Q8NAU1 212 aa14.74□□□□□ -0.05
HERPUD1-219ENST00000570273 TRPV3Q8NET8 790 aa14.74□□□□□ -0.05
HERPUD1-219ENST00000570273 OR4D9Q8NGE8 314 aa14.74□□□□□ -0.05
HERPUD1-219ENST00000570273 CREB3L4Q8TEY5 395 aa14.74□□□□□ -0.05
HERPUD1-219ENST00000570273 RERGQ96A58 199 aaPredicted RBP14.74□□□□□ -0.05
HERPUD1-219ENST00000570273 MARK4Q96L34 752 aa14.74□□□□□ -0.05
HERPUD1-219ENST00000570273 CATSPER2Q96P56 530 aa14.74□□□□□ -0.05
HERPUD1-219ENST00000570273 OR51B5Q9H339 312 aa14.74□□□□□ -0.05
HERPUD1-219ENST00000570273 SYNPO2LQ9H987 977 aa14.74□□□□□ -0.05
HERPUD1-219ENST00000570273 FAM60AQ9NP50 221 aa14.74□□□□□ -0.05
HERPUD1-219ENST00000570273 PDE7BQ9NP56 450 aa14.74□□□□□ -0.05
HERPUD1-219ENST00000570273 C1orf109Q9NX04 203 aa14.74□□□□□ -0.05
HERPUD1-219ENST00000570273 VPS29Q9UBQ0 182 aa14.74□□□□□ -0.05
HERPUD1-219ENST00000570273 PPT2Q9UMR5 302 aa14.74□□□□□ -0.05
HERPUD1-219ENST00000570273 TRIM33Q9UPN9 1127 aa14.74□□□□□ -0.05
HERPUD1-219ENST00000570273 PCM1Q15154 2024 aa14.73□□□□□ -0.05
HERPUD1-219ENST00000570273 D6RAR5 112 aa14.73□□□□□ -0.05
HERPUD1-219ENST00000570273 H0YGG7 62 aa14.73□□□□□ -0.05
HERPUD1-219ENST00000570273 SAP18O00422 153 aaKnown RBP14.73□□□□□ -0.05
HERPUD1-219ENST00000570273 SEC22BO75396 215 aa14.73□□□□□ -0.05
HERPUD1-219ENST00000570273 DCTN3O75935 186 aa14.73□□□□□ -0.05
HERPUD1-219ENST00000570273 NCF2P19878 526 aaPredicted RBP14.73□□□□□ -0.05
HERPUD1-219ENST00000570273 PTX3P26022 381 aaPredicted RBP14.73□□□□□ -0.05
HERPUD1-219ENST00000570273 RAP1GDS1P52306 607 aa14.73□□□□□ -0.05
HERPUD1-219ENST00000570273 ARF3P61204 181 aaPredicted RBP14.73□□□□□ -0.05
HERPUD1-219ENST00000570273 RGS1Q08116 209 aa14.73□□□□□ -0.05
HERPUD1-219ENST00000570273 SPIDRQ14159 915 aa14.73□□□□□ -0.05
HERPUD1-219ENST00000570273 CCDC157Q569K6 752 aa14.73□□□□□ -0.05
HERPUD1-219ENST00000570273 ZC3H12BQ5HYM0 836 aaKnown RBP14.73□□□□□ -0.05
HERPUD1-219ENST00000570273 C6orf136Q5SQH8 315 aa14.73□□□□□ -0.05
HERPUD1-219ENST00000570273 KHDRBS2Q5VWX1 349 aaKnown RBP14.73□□□□□ -0.05
HERPUD1-219ENST00000570273 FRMPD2BQ6IN97 320 aa14.73□□□□□ -0.05
HERPUD1-219ENST00000570273 TMPRSS9Q7Z410 1059 aa14.73□□□□□ -0.05
HERPUD1-219ENST00000570273 SLC13A3Q8WWT9 602 aa14.73□□□□□ -0.05
HERPUD1-219ENST00000570273 OR2A5Q96R48 311 aa14.73□□□□□ -0.05
HERPUD1-219ENST00000570273 CENPKQ9BS16 269 aa14.73□□□□□ -0.05
HERPUD1-219ENST00000570273 C1orf50Q9BV19 199 aa14.73□□□□□ -0.05
HERPUD1-219ENST00000570273 SEMA5BQ9P283 1151 aa14.73□□□□□ -0.05
HERPUD1-219ENST00000570273 POLR3HQ9Y535 204 aaPredicted RBP14.73□□□□□ -0.05
HERPUD1-219ENST00000570273 ASXL3Q9C0F0 2248 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms