RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 WLSQ5T9L3 541 aa8.12□□□□□ -1.11
SMG1-216ENST00000569122 NDUFAF5Q5TEU4 345 aa8.12□□□□□ -1.11
SMG1-216ENST00000569122 ZNF468Q5VIY5 522 aaPredicted RBP8.12□□□□□ -1.11
SMG1-216ENST00000569122 NIPAL1Q6NVV3 410 aa8.12□□□□□ -1.11
SMG1-216ENST00000569122 AFTPHQ6ULP2 937 aa8.12□□□□□ -1.11
SMG1-216ENST00000569122 OTOAQ7RTW8 1153 aa8.12□□□□□ -1.11
SMG1-216ENST00000569122 VRK3Q8IV63 474 aa8.12□□□□□ -1.11
SMG1-216ENST00000569122 CDKL3Q8IVW4 592 aaPredicted RBP8.12□□□□□ -1.11
SMG1-216ENST00000569122 GPALPP1Q8IXQ4 340 aa8.12□□□□□ -1.11
SMG1-216ENST00000569122 RCOR2Q8IZ40 523 aa8.12□□□□□ -1.11
SMG1-216ENST00000569122 CYP4Z2PQ8N1L4 340 aa8.12□□□□□ -1.11
SMG1-216ENST00000569122 RPRMLQ8N4K4 120 aa8.12□□□□□ -1.11
SMG1-216ENST00000569122 ARHGEF39Q8N4T4 335 aa8.12□□□□□ -1.11
SMG1-216ENST00000569122 OR52N2Q8NGI0 321 aa8.12□□□□□ -1.11
SMG1-216ENST00000569122 OR9A4Q8NGU2 314 aa8.12□□□□□ -1.11
SMG1-216ENST00000569122 RNASE6Q93091 150 aaKnown RBP8.12□□□□□ -1.11
SMG1-216ENST00000569122 SARAFQ96BY9 339 aa8.12□□□□□ -1.11
SMG1-216ENST00000569122 THAP11Q96EK4 314 aa8.12□□□□□ -1.11
SMG1-216ENST00000569122 SMC6Q96SB8 1091 aa8.12□□□□□ -1.11
SMG1-216ENST00000569122 ACAT2Q9BWD1 397 aa8.12□□□□□ -1.11
SMG1-216ENST00000569122 DEFB126Q9BYW3 111 aa8.12□□□□□ -1.11
SMG1-216ENST00000569122 DEFB127Q9H1M4 99 aa8.12□□□□□ -1.11
SMG1-216ENST00000569122 HSD3B7Q9H2F3 369 aa8.12□□□□□ -1.11
SMG1-216ENST00000569122 LRRC40Q9H9A6 602 aa8.12□□□□□ -1.11
SMG1-216ENST00000569122 ANKHQ9HCJ1 492 aa8.12□□□□□ -1.11
SMG1-216ENST00000569122 FAM114A2Q9NRY5 505 aa8.12□□□□□ -1.11
SMG1-216ENST00000569122 Q9UFV3 132 aa8.12□□□□□ -1.11
SMG1-216ENST00000569122 ANAPC5Q9UJX4 755 aa8.12□□□□□ -1.11
SMG1-216ENST00000569122 ACAD8Q9UKU7 415 aa8.12□□□□□ -1.11
SMG1-216ENST00000569122 CBLCQ9ULV8 474 aa8.12□□□□□ -1.11
SMG1-216ENST00000569122 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.12□□□□□ -1.11
SMG1-216ENST00000569122 HIVEP2P31629 2446 aa8.12□□□□□ -1.11
SMG1-216ENST00000569122 NBEAL1Q6ZS30 2694 aa8.12□□□□□ -1.11
SMG1-216ENST00000569122 FN1P02751 2386 aaKnown RBP8.11□□□□□ -1.11
SMG1-216ENST00000569122 ATRQ13535 2644 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 AKAP6Q13023 2319 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 A0A1B0GTH6 734 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 A0A1W2PPV9 198 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 MROH6A6NGR9 719 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 RNF212BA8MTL3 300 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 APOC4-APOC2K7ER74 178 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 PRMT5O14744 637 aaPredicted RBP8.11□□□□□ -1.11
SMG1-216ENST00000569122 SUSD5O60279 629 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 OR1I1O60431 355 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 MAN1A2O60476 641 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 SERPINC1P01008 464 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 APOC2P02655 101 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 TNNT1P13805 278 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 FOXN2P32314 431 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 ASCL1P50553 236 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 POU6F1Q14863 301 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 FBXL19-AS1Q494R0 122 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 FASTKD1Q53R41 847 aaKnown RBP8.11□□□□□ -1.11
SMG1-216ENST00000569122 PTRHD1Q6GMV3 140 aaKnown RBP8.11□□□□□ -1.11
SMG1-216ENST00000569122 ZNF425Q6IV72 752 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 RBM43Q6ZSC3 357 aaKnown RBP8.11□□□□□ -1.11
SMG1-216ENST00000569122 KIAA0408Q6ZU52 694 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 ADCK2Q7Z695 626 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 LINC00523Q86TU6 105 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 LRRC6Q86X45 466 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 ARMC10Q8N2F6 343 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 CAMKVQ8NCB2 501 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 ARMC2Q8NEN0 867 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 OR5M9Q8NGP3 310 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 OR9A1PQ8NGU1 263 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 TMEM158Q8WZ71 300 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 PIGTQ969N2 578 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 PIP5K1AQ99755 562 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 YIPF4Q9BSR8 244 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 PLEKHF2Q9H8W4 249 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 ZDHHC11Q9H8X9 412 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 PNPLA3Q9NST1 481 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 PCYOX1Q9UHG3 505 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 CAPN11Q9UMQ6 739 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 PCDHGB3Q9Y5G1 929 aa8.11□□□□□ -1.11
SMG1-216ENST00000569122 KCNE1BA0A087WTH5 132 aa8.1□□□□□ -1.11
SMG1-216ENST00000569122 A0A1B0GVC2 190 aa8.1□□□□□ -1.11
SMG1-216ENST00000569122 CCDC162PA2VCL2 907 aa8.1□□□□□ -1.11
SMG1-216ENST00000569122 INAFM1C9JVW0 142 aa8.1□□□□□ -1.11
SMG1-216ENST00000569122 H7C1Q1 480 aa8.1□□□□□ -1.11
SMG1-216ENST00000569122 AQP7O14520 342 aa8.1□□□□□ -1.11
SMG1-216ENST00000569122 SMPD2O60906 423 aa8.1□□□□□ -1.11
SMG1-216ENST00000569122 IGHG3P01860 377 aa8.1□□□□□ -1.11
SMG1-216ENST00000569122 ERGP11308 486 aa8.1□□□□□ -1.11
SMG1-216ENST00000569122 CD53P19397 219 aa8.1□□□□□ -1.11
SMG1-216ENST00000569122 RFC3P40938 356 aa8.1□□□□□ -1.11
SMG1-216ENST00000569122 TTPAP49638 278 aa8.1□□□□□ -1.11
SMG1-216ENST00000569122 ST13P50502 369 aaKnown RBP8.1□□□□□ -1.11
SMG1-216ENST00000569122 EFNA3P52797 238 aa8.1□□□□□ -1.11
SMG1-216ENST00000569122 RPS15AP62244 130 aaKnown RBP8.1□□□□□ -1.11
SMG1-216ENST00000569122 RHAGQ02094 409 aa8.1□□□□□ -1.11
SMG1-216ENST00000569122 GTF3C1Q12789 2109 aa8.1□□□□□ -1.11
SMG1-216ENST00000569122 NR1I3Q14994 352 aa8.1□□□□□ -1.11
SMG1-216ENST00000569122 SF3B4Q15427 424 aaKnown RBP eCLIP8.1□□□□□ -1.11
SMG1-216ENST00000569122 PARP6Q2NL67 630 aa8.1□□□□□ -1.11
SMG1-216ENST00000569122 C1orf185Q5T7R7 199 aa8.1□□□□□ -1.11
SMG1-216ENST00000569122 ICE2Q659A1 982 aa8.1□□□□□ -1.11
SMG1-216ENST00000569122 PODNL1Q6PEZ8 512 aa8.1□□□□□ -1.11
SMG1-216ENST00000569122 DARS2Q6PI48 645 aaKnown RBP8.1□□□□□ -1.11
SMG1-216ENST00000569122 C16orf47Q6ZP98 133 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms