RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 SRMSQ9H3Y6 488 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 SLC6A13Q9NSD5 602 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 WNT16Q9UBV4 365 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 PCDHB14Q9Y5E9 798 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 GSAPA4D1B5 854 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 NPIPB8E9PQR5 432 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 H3BNX3 289 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 LCMT2O60294 686 aaKnown RBP6.78□□□□□ -1.32
SMG1-215ENST00000568239 TPST1O60507 370 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 VIPP01282 170 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 CELA2BP08218 269 aaPredicted RBP6.78□□□□□ -1.32
SMG1-215ENST00000568239 LAMP1P11279 417 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 HSD17B1P14061 328 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 PKLRP30613 574 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 HPCAL1P37235 193 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 PIK3CBP42338 1070 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 CDKN2CP42773 168 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 ASMTP46597 345 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 PPM1FP49593 454 aaPredicted RBP6.78□□□□□ -1.32
SMG1-215ENST00000568239 CCR5P51681 352 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 TAS2R50P59544 299 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 CSNK1G2P78368 415 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 MC1RQ01726 317 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 RPL6Q02878 288 aaKnown RBP6.78□□□□□ -1.32
SMG1-215ENST00000568239 SRSF11Q05519 484 aaKnown RBP6.78□□□□□ -1.32
SMG1-215ENST00000568239 ZNF763Q0D2J5 394 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 BNIP2Q12982 314 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 FZD5Q13467 585 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 E2F2Q14209 437 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 PRRT3Q5FWE3 981 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 CPTPQ5TA50 214 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 FAM180BQ6P0A1 224 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 ZFP1Q6P2D0 407 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 LPCAT2Q7L5N7 544 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 ZNF761Q86XN6 746 aaPredicted RBP6.78□□□□□ -1.32
SMG1-215ENST00000568239 SFTPA2Q8IWL1 248 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 ADHFE1Q8IWW8 467 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 RIMKLAQ8IXN7 391 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 CLECL1Q8IZS7 167 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 ABHD11Q8NFV4 315 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 DNAJC9Q8WXX5 260 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 TESCQ96BS2 214 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 MIEF2Q96C03 454 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 PRPF18Q99633 342 aaKnown RBP6.78□□□□□ -1.32
SMG1-215ENST00000568239 TRIM15Q9C019 465 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 SEMA6AQ9H2E6 1030 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 TBC1D17Q9HA65 648 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 PELI2Q9HAT8 420 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 TRNAU1APQ9NX07 287 aaKnown RBP6.78□□□□□ -1.32
SMG1-215ENST00000568239 SLC25A37Q9NYZ2 338 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 KLF15Q9UIH9 416 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 DMTF1Q9Y222 760 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 BTBD3Q9Y2F9 522 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 AP4S1Q9Y587 144 aa6.78□□□□□ -1.32
SMG1-215ENST00000568239 SCN3AQ9NY46 2000 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 SPTY2D1-AS1A0A0U1RR47 76 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 PRR19A6NJB7 356 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 GABRR3A8MPY1 467 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 ARPC2O15144 300 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 GSTA4O15217 222 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 MAP3K13O43283 966 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 GMNNO75496 209 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 IGLV3-19P01714 112 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 PIM1P11309 404 aaPredicted RBP6.77□□□□□ -1.33
SMG1-215ENST00000568239 HOXB3P14651 431 aaPredicted RBP6.77□□□□□ -1.33
SMG1-215ENST00000568239 PEX2P28328 305 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 NDUFS1P28331 727 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 PLA2G16P53816 162 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 OR4D2P58180 307 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 RHDQ02161 417 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 ZP2Q05996 745 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 CYP4F3Q08477 520 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 C2orf80Q0P641 193 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 CYP51A1Q16850 503 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 CCNYL2Q5T2Q4 361 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 C10orf62Q5T681 223 aaPredicted RBP6.77□□□□□ -1.33
SMG1-215ENST00000568239 ANGPTL8Q6UXH0 198 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 VN1R5Q7Z5H4 357 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 ZNF687Q8N1G0 1237 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 PQLC1Q8N2U9 271 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 FBXL6Q8N531 539 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 OR4K1Q8NGD4 311 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 PNPT1Q8TCS8 783 aaKnown RBP6.77□□□□□ -1.33
SMG1-215ENST00000568239 CANT1Q8WVQ1 401 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 FIG4Q92562 907 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 CENPKQ9BS16 269 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 DUSP26Q9BV47 211 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 KCNH6Q9H252 994 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 IKZF5Q9H5V7 419 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 KIR3DX1Q9H7L2 352 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 AHSPQ9NZD4 102 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 SNX13Q9Y5W8 968 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 PLXND1Q9Y4D7 1925 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 IGKV1-8A0A0C4DH67 115 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 BTN3A3O00478 584 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 SCAMP2O15127 329 aaKnown RBP6.77□□□□□ -1.33
SMG1-215ENST00000568239 ERN1O75460 977 aaKnown RBP6.77□□□□□ -1.33
SMG1-215ENST00000568239 JUNDP17535 347 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 SHMT2P34897 504 aa6.77□□□□□ -1.33
SMG1-215ENST00000568239 ALDH9A1P49189 494 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms