RNA–Protein interactions for RNA: ENST00000567015.5

UTP4-208, Transcript of UTP4, small subunit processome component, human

TSL 2

Gene UTP4, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UTP4-208	ENST00000567015	CSHL1	Q14406	222 aa		11.21	□□□□□ -0.61
UTP4-208	ENST00000567015	VWA2	Q5GFL6	755 aa		11.21	□□□□□ -0.61
UTP4-208	ENST00000567015	VWA5B1	Q5TIE3	1220 aa		11.21	□□□□□ -0.61
UTP4-208	ENST00000567015	NIPAL1	Q6NVV3	410 aa		11.21	□□□□□ -0.61
UTP4-208	ENST00000567015	SLCO4C1	Q6ZQN7	724 aa		11.21	□□□□□ -0.61
UTP4-208	ENST00000567015	PTRH1	Q86Y79	214 aa	Known RBP	11.21	□□□□□ -0.61
UTP4-208	ENST00000567015	PDSS2	Q86YH6	399 aa		11.21	□□□□□ -0.61
UTP4-208	ENST00000567015	ZC3H7A	Q8IWR0	971 aa	Known RBP	11.21	□□□□□ -0.61
UTP4-208	ENST00000567015	GALNT16	Q8N428	558 aa		11.21	□□□□□ -0.61
UTP4-208	ENST00000567015	METTL27	Q8N6F8	245 aa	Predicted RBP	11.21	□□□□□ -0.61
UTP4-208	ENST00000567015	CEP112	Q8N8E3	955 aa		11.21	□□□□□ -0.61
UTP4-208	ENST00000567015	ANKRD53	Q8N9V6	530 aa		11.21	□□□□□ -0.61
UTP4-208	ENST00000567015	KCT2	Q8NC54	265 aa		11.21	□□□□□ -0.61
UTP4-208	ENST00000567015	ZNF740	Q8NDX6	193 aa		11.21	□□□□□ -0.61
UTP4-208	ENST00000567015	RHEBL1	Q8TAI7	183 aa		11.21	□□□□□ -0.61
UTP4-208	ENST00000567015	WDR34	Q96EX3	536 aa		11.21	□□□□□ -0.61
UTP4-208	ENST00000567015	MMAB	Q96EY8	250 aa	Predicted RBP	11.21	□□□□□ -0.61
UTP4-208	ENST00000567015	SMIM10	Q96HG1	83 aa		11.21	□□□□□ -0.61
UTP4-208	ENST00000567015	VPS50	Q96JG6	964 aa		11.21	□□□□□ -0.61
UTP4-208	ENST00000567015	ATOH8	Q96SQ7	321 aa		11.21	□□□□□ -0.61
UTP4-208	ENST00000567015	TMEM79	Q9BSE2	394 aa		11.21	□□□□□ -0.61
UTP4-208	ENST00000567015	SLC6A16	Q9GZN6	736 aa		11.21	□□□□□ -0.61
UTP4-208	ENST00000567015	EPN3	Q9H201	632 aa		11.21	□□□□□ -0.61
UTP4-208	ENST00000567015	SOX17	Q9H6I2	414 aa	Predicted RBP	11.21	□□□□□ -0.61
UTP4-208	ENST00000567015	NMRAL1	Q9HBL8	299 aa		11.21	□□□□□ -0.61
UTP4-208	ENST00000567015	IGSF5	Q9NSI5	407 aa		11.21	□□□□□ -0.61
UTP4-208	ENST00000567015	GPR83	Q9NYM4	423 aa		11.21	□□□□□ -0.61
UTP4-208	ENST00000567015	IDS	B3KWA1	339 aa		11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	PRAMEF4	O60810	478 aa		11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	HP	P00738	406 aa		11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	LTA4H	P09960	611 aa	Known RBP	11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	SLC35G6	P0C7Q6	338 aa		11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	C1GALT1C1L	P0DN25	315 aa		11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	MTHFD2	P13995	350 aa		11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	GNAZ	P19086	355 aa		11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	PHB	P35232	272 aa		11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	CASP2	P42575	452 aa		11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	MAGEA12	P43365	314 aa		11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	AVPR1B	P47901	424 aa		11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	CD97	P48960	835 aa		11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	EFNA3	P52797	238 aa		11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	EFTUD2	Q15029	972 aa	Known RBP eCLIP	11.2	□□□□□ -0.62	3e-6	■■■■■ 41.9
UTP4-208	ENST00000567015	HERC3	Q15034	1050 aa		11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	OR4D1	Q15615	310 aa		11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	UBAP2	Q5T6F2	1119 aa	Known RBP	11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	PRAMEF9	Q5VWM5	478 aa		11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	PRSS41	Q7RTY9	318 aa		11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	GPSM1	Q86YR5	675 aa		11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	CENPL	Q8N0S6	344 aa	Predicted RBP	11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	SPATA6L	Q8N4H0	392 aa		11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	TBC1D19	Q8N5T2	526 aa		11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	CLEC1A	Q8NC01	280 aa		11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	TRPV3	Q8NET8	790 aa		11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	OR9A4	Q8NGU2	314 aa		11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	STAG3L4	Q8TBR4	150 aa		11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	CREB3L4	Q8TEY5	395 aa		11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	SLC44A1	Q8WWI5	657 aa		11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	ALKBH8	Q96BT7	664 aa	Known RBP	11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	FMO2	Q99518	471 aa		11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	AIF1L	Q9BQI0	150 aa		11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	CRB3	Q9BUF7	120 aa		11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	CDC42EP4	Q9H3Q1	356 aa	Known RBP	11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	CNOT10	Q9H9A5	744 aa	Known RBP	11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	TRPC4	Q9UBN4	977 aa		11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	C3orf18	Q9UK00	162 aa		11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	FBXL4	Q9UKA2	621 aa		11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	DYRK1B	Q9Y463	629 aa		11.2	□□□□□ -0.62
UTP4-208	ENST00000567015	SCN2A	Q99250	2005 aa		11.19	□□□□□ -0.62
UTP4-208	ENST00000567015	OR1F1	O43749	312 aa		11.19	□□□□□ -0.62
UTP4-208	ENST00000567015	KLK8	O60259	260 aa		11.19	□□□□□ -0.62
UTP4-208	ENST00000567015	GALR3	O60755	368 aa	Predicted RBP	11.19	□□□□□ -0.62
UTP4-208	ENST00000567015	DPM1	O60762	260 aa		11.19	□□□□□ -0.62
UTP4-208	ENST00000567015	KERA	O60938	352 aa		11.19	□□□□□ -0.62
UTP4-208	ENST00000567015	STK16	O75716	305 aa		11.19	□□□□□ -0.62
UTP4-208	ENST00000567015	SORBS2	O94875	1100 aa	Known RBP	11.19	□□□□□ -0.62
UTP4-208	ENST00000567015	ALDOA	P04075	364 aa	Known RBP	11.19	□□□□□ -0.62
UTP4-208	ENST00000567015	C2	P06681	752 aa		11.19	□□□□□ -0.62
UTP4-208	ENST00000567015	SERPINA6	P08185	405 aa		11.19	□□□□□ -0.62
UTP4-208	ENST00000567015	COX6A1	P12074	109 aa		11.19	□□□□□ -0.62
UTP4-208	ENST00000567015	EPOR	P19235	508 aa		11.19	□□□□□ -0.62
UTP4-208	ENST00000567015	CXCR2	P25025	360 aa		11.19	□□□□□ -0.62
UTP4-208	ENST00000567015	GDF5	P43026	501 aa		11.19	□□□□□ -0.62
UTP4-208	ENST00000567015	EMP2	P54851	167 aa		11.19	□□□□□ -0.62
UTP4-208	ENST00000567015	MEF2A	Q02078	507 aa	Predicted RBP	11.19	□□□□□ -0.62
UTP4-208	ENST00000567015	TLE1	Q04724	770 aa		11.19	□□□□□ -0.62
UTP4-208	ENST00000567015		Q0VFX4	171 aa		11.19	□□□□□ -0.62
UTP4-208	ENST00000567015	CDC16	Q13042	620 aa		11.19	□□□□□ -0.62
UTP4-208	ENST00000567015	TBCC	Q15814	346 aa		11.19	□□□□□ -0.62
UTP4-208	ENST00000567015	RBBP7	Q16576	425 aa		11.19	□□□□□ -0.62
UTP4-208	ENST00000567015	SYT16	Q17RD7	645 aa		11.19	□□□□□ -0.62
UTP4-208	ENST00000567015	C18orf21	Q32NC0	220 aa	Predicted RBP	11.19	□□□□□ -0.62
UTP4-208	ENST00000567015	ADPRM	Q3LIE5	342 aa		11.19	□□□□□ -0.62
UTP4-208	ENST00000567015	TUBB8	Q3ZCM7	444 aa		11.19	□□□□□ -0.62
UTP4-208	ENST00000567015	FRA10AC1	Q70Z53	315 aa		11.19	□□□□□ -0.62
UTP4-208	ENST00000567015	CMC1	Q7Z7K0	106 aa		11.19	□□□□□ -0.62
UTP4-208	ENST00000567015	RBMXL3	Q8N7X1	1067 aa	Known RBP	11.19	□□□□□ -0.62
UTP4-208	ENST00000567015	EIF1AD	Q8N9N8	165 aa	Known RBP	11.19	□□□□□ -0.62
UTP4-208	ENST00000567015	TEX19	Q8NA77	164 aa		11.19	□□□□□ -0.62
UTP4-208	ENST00000567015	PLPP5	Q8NEB5	264 aa		11.19	□□□□□ -0.62
UTP4-208	ENST00000567015	OR51Q1	Q8NH59	317 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms