RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 ZNF282Q9UDV7 671 aaPredicted RBP20.85■□□□□ 0.93
SPSB3-208ENST00000566339 VPS51Q9UID3 782 aa20.85■□□□□ 0.93
SPSB3-208ENST00000566339 PNMA8BQ9ULN7 279 aaPredicted RBP20.85■□□□□ 0.93
SPSB3-208ENST00000566339 PCDHGB6Q9Y5F9 930 aa20.85■□□□□ 0.93
SPSB3-208ENST00000566339 PCDHGA2Q9Y5H1 932 aa20.85■□□□□ 0.93
SPSB3-208ENST00000566339 ARRDC5A6NEK1 342 aa20.85■□□□□ 0.93
SPSB3-208ENST00000566339 TNFRSF11BO00300 401 aa20.85■□□□□ 0.93
SPSB3-208ENST00000566339 ZNF24P17028 368 aa20.85■□□□□ 0.93
SPSB3-208ENST00000566339 RGS6P49758 472 aa20.85■□□□□ 0.93
SPSB3-208ENST00000566339 SELENOWP63302 87 aa20.85■□□□□ 0.93
SPSB3-208ENST00000566339 ZNF362Q5T0B9 420 aaPredicted RBP20.85■□□□□ 0.93
SPSB3-208ENST00000566339 C10orf62Q5T681 223 aaPredicted RBP20.85■□□□□ 0.93
SPSB3-208ENST00000566339 PDE12Q6L8Q7 609 aaKnown RBP20.85■□□□□ 0.93
SPSB3-208ENST00000566339 ZNF544Q6NX49 715 aa20.85■□□□□ 0.93
SPSB3-208ENST00000566339 GDPGP1Q6ZNW5 385 aa20.85■□□□□ 0.93
SPSB3-208ENST00000566339 CCDC190Q86UF4 302 aa20.85■□□□□ 0.93
SPSB3-208ENST00000566339 FAM124AQ86V42 546 aa20.85■□□□□ 0.93
SPSB3-208ENST00000566339 PCSK9Q8NBP7 692 aaKnown RBP20.85■□□□□ 0.93
SPSB3-208ENST00000566339 OR4C15Q8NGM1 316 aa20.85■□□□□ 0.93
SPSB3-208ENST00000566339 PXYLP1Q8TE99 480 aa20.85■□□□□ 0.93
SPSB3-208ENST00000566339 HTRA1Q92743 480 aa20.85■□□□□ 0.93
SPSB3-208ENST00000566339 ALG14Q96F25 216 aa20.85■□□□□ 0.93
SPSB3-208ENST00000566339 CCDC97Q96F63 343 aaPredicted RBP20.85■□□□□ 0.93
SPSB3-208ENST00000566339 COPS8Q99627 209 aa20.85■□□□□ 0.93
SPSB3-208ENST00000566339 RNF208Q9H0X6 261 aa20.85■□□□□ 0.93
SPSB3-208ENST00000566339 RUBCNLQ9H714 662 aa20.85■□□□□ 0.93
SPSB3-208ENST00000566339 SPATA6Q9NWH7 488 aaPredicted RBP20.85■□□□□ 0.93
SPSB3-208ENST00000566339 MARCH5Q9NX47 278 aa20.85■□□□□ 0.93
SPSB3-208ENST00000566339 AASSQ9UDR5 926 aa20.85■□□□□ 0.93
SPSB3-208ENST00000566339 C1orf226A1L170 272 aa20.84■□□□□ 0.93
SPSB3-208ENST00000566339 FAM172BPA6NC97 362 aa20.84■□□□□ 0.93
SPSB3-208ENST00000566339 GFYI3L273 518 aa20.84■□□□□ 0.93
SPSB3-208ENST00000566339 SRPRAP08240 638 aaKnown RBP20.84■□□□□ 0.93
SPSB3-208ENST00000566339 ADORA3P0DMS8 318 aa20.84■□□□□ 0.93
SPSB3-208ENST00000566339 CCL5P13501 91 aa20.84■□□□□ 0.93
SPSB3-208ENST00000566339 RRM2P31350 389 aa20.84■□□□□ 0.93
SPSB3-208ENST00000566339 HNF1BP35680 557 aa20.84■□□□□ 0.93
SPSB3-208ENST00000566339 SLC19A1P41440 591 aa20.84■□□□□ 0.93
SPSB3-208ENST00000566339 SPANXN2Q5MJ10 180 aa20.84■□□□□ 0.93
SPSB3-208ENST00000566339 AGAP6Q5VW22 663 aa20.84■□□□□ 0.93
SPSB3-208ENST00000566339 NLRP8Q86W28 1048 aa20.84■□□□□ 0.93
SPSB3-208ENST00000566339 RASGRP3Q8IV61 690 aa20.84■□□□□ 0.93
SPSB3-208ENST00000566339 STX19Q8N4C7 294 aa20.84■□□□□ 0.93
SPSB3-208ENST00000566339 OR10G2Q8NGC3 310 aa20.84■□□□□ 0.93
SPSB3-208ENST00000566339 AGAP4Q96P64 663 aa20.84■□□□□ 0.93
SPSB3-208ENST00000566339 C2orf49Q9BVC5 232 aaPredicted RBP20.84■□□□□ 0.93
SPSB3-208ENST00000566339 VPS29Q9UBQ0 182 aa20.84■□□□□ 0.93
SPSB3-208ENST00000566339 POU2F3Q9UKI9 436 aa20.84■□□□□ 0.93
SPSB3-208ENST00000566339 PPIL1Q9Y3C6 166 aa20.84■□□□□ 0.93
SPSB3-208ENST00000566339 GFRA2O00451 464 aa20.83■□□□□ 0.93
SPSB3-208ENST00000566339 SCAMP2O15127 329 aaKnown RBP20.83■□□□□ 0.93
SPSB3-208ENST00000566339 INHAP05111 366 aa20.83■□□□□ 0.93
SPSB3-208ENST00000566339 TRAPPC2P0DI81 140 aa20.83■□□□□ 0.93
SPSB3-208ENST00000566339 TRAPPC2BP0DI82 140 aa20.83■□□□□ 0.93
SPSB3-208ENST00000566339 DBTP11182 482 aaKnown RBP20.83■□□□□ 0.93
SPSB3-208ENST00000566339 CKBP12277 381 aa20.83■□□□□ 0.93
SPSB3-208ENST00000566339 CA5AP35218 305 aa20.83■□□□□ 0.93
SPSB3-208ENST00000566339 PPIGQ13427 754 aaKnown RBP eCLIP20.83■□□□□ 0.936e-7■■□□□ 11.8
SPSB3-208ENST00000566339 PTCHD3Q3KNS1 767 aa20.83■□□□□ 0.93
SPSB3-208ENST00000566339 PRSS36Q5K4E3 855 aa20.83■□□□□ 0.93
SPSB3-208ENST00000566339 DESI1Q6ICB0 168 aa20.83■□□□□ 0.93
SPSB3-208ENST00000566339 RSPO2Q6UXX9 243 aaPredicted RBP20.83■□□□□ 0.93
SPSB3-208ENST00000566339 C16orf59Q7L2K0 433 aa20.83■□□□□ 0.93
SPSB3-208ENST00000566339 KRT73Q86Y46 540 aa20.83■□□□□ 0.93
SPSB3-208ENST00000566339 ST13P5Q8NFI4 369 aaPredicted RBP20.83■□□□□ 0.93
SPSB3-208ENST00000566339 COQ8BQ96D53 544 aa20.83■□□□□ 0.93
SPSB3-208ENST00000566339 TMCO6Q96DC7 493 aa20.83■□□□□ 0.93
SPSB3-208ENST00000566339 C11orf24Q96F05 449 aaPredicted RBP20.83■□□□□ 0.93
SPSB3-208ENST00000566339 SNX18Q96RF0 628 aa20.83■□□□□ 0.93
SPSB3-208ENST00000566339 MAPKAP1Q9BPZ7 522 aa20.83■□□□□ 0.93
SPSB3-208ENST00000566339 DUSP26Q9BV47 211 aa20.83■□□□□ 0.93
SPSB3-208ENST00000566339 FZD4Q9ULV1 537 aa20.83■□□□□ 0.93
SPSB3-208ENST00000566339 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.83■□□□□ 0.932e-8■■■■■ 31.8
SPSB3-208ENST00000566339 FCF1Q9Y324 198 aaKnown RBP20.83■□□□□ 0.93
SPSB3-208ENST00000566339 CENPBD1B2RD01 187 aa20.82■□□□□ 0.92
SPSB3-208ENST00000566339 DIRAS1O95057 198 aa20.82■□□□□ 0.92
SPSB3-208ENST00000566339 CLDN7O95471 211 aa20.82■□□□□ 0.92
SPSB3-208ENST00000566339 PIPP12273 146 aaPredicted RBP20.82■□□□□ 0.92
SPSB3-208ENST00000566339 MZF1P28698 734 aaPredicted RBP20.82■□□□□ 0.92
SPSB3-208ENST00000566339 HNF4AP41235 474 aa20.82■□□□□ 0.92
SPSB3-208ENST00000566339 PNLIPRP1P54315 467 aa20.82■□□□□ 0.92
SPSB3-208ENST00000566339 IFI44LQ53G44 452 aa20.82■□□□□ 0.92
SPSB3-208ENST00000566339 ARMCX4Q5H9R4 360 aa20.82■□□□□ 0.92
SPSB3-208ENST00000566339 ATXN7L2Q5T6C5 722 aaPredicted RBP20.82■□□□□ 0.92
SPSB3-208ENST00000566339 SLC8B1Q6J4K2 584 aa20.82■□□□□ 0.92
SPSB3-208ENST00000566339 CCBE1Q6UXH8 406 aaPredicted RBP20.82■□□□□ 0.92
SPSB3-208ENST00000566339 TRMT2BQ96GJ1 504 aaKnown RBP20.82■□□□□ 0.92
SPSB3-208ENST00000566339 EGLN2Q96KS0 407 aa20.82■□□□□ 0.92
SPSB3-208ENST00000566339 B3GALT6Q96L58 329 aa20.82■□□□□ 0.92
SPSB3-208ENST00000566339 NUAK2Q9H093 628 aa20.82■□□□□ 0.92
SPSB3-208ENST00000566339 VPS4AQ9UN37 437 aa20.82■□□□□ 0.92
SPSB3-208ENST00000566339 TSPAN3O60637 253 aa20.82■□□□□ 0.92
SPSB3-208ENST00000566339 TBL1XO60907 577 aa20.82■□□□□ 0.92
SPSB3-208ENST00000566339 LRATO95237 230 aa20.82■□□□□ 0.92
SPSB3-208ENST00000566339 KRT8P05787 483 aa20.82■□□□□ 0.92
SPSB3-208ENST00000566339 CD72P21854 359 aa20.82■□□□□ 0.92
SPSB3-208ENST00000566339 CCR7P32248 378 aa20.82■□□□□ 0.92
SPSB3-208ENST00000566339 NEK2P51955 445 aa20.82■□□□□ 0.92
SPSB3-208ENST00000566339 RGNQ15493 299 aa20.82■□□□□ 0.92
SPSB3-208ENST00000566339 MICAQ29983 383 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms