RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 NIF3L1Q9GZT8 377 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 PDGFCQ9NRA1 345 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 MRTO4Q9UKD2 239 aaKnown RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 CDH9Q9ULB4 789 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 UBR2Q8IWV8 1755 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 OR6C70A6NIJ9 312 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 OR6C65A6NJZ3 312 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 EFCAB9A8MZ26 197 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 PRR35P0CG20 571 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 CDH13P55290 713 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 EIF5AP63241 154 aaKnown RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 DYRK1AQ13627 763 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 QPRTQ15274 297 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 FCN2Q15485 313 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 FAM26DQ5JW98 314 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 PDSS1Q5T2R2 415 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 SAXO2Q658L1 398 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 FAM109BQ6ICB4 259 aaPredicted RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 LRFN4Q6PJG9 635 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 OTOP1Q7RTM1 612 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 NKAIN4Q8IVV8 208 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 SCN4BQ8IWT1 228 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 BEST4Q8NFU0 473 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 CYP2W1Q8TAV3 490 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 METTL6Q8TCB7 284 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 ZNF606Q8WXB4 792 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 TBC1D20Q96BZ9 403 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 RNF145Q96MT1 663 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 PHB2Q99623 299 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 LHX5Q9H2C1 402 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 GSTO2Q9H4Y5 243 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 XKR8Q9H6D3 395 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 GALNT9Q9HCQ5 603 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 AASSQ9UDR5 926 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 MAGEL2Q9UJ55 1249 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 SLC39A10Q9ULF5 831 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 MINPP1Q9UNW1 487 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 TRAV6A0A075B6T7 132 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 ZNF816-ZNF321PA0A0X1KG74 233 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 A0A1B0GVM2 712 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 SLC12A8A0AV02 714 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 FAM221BA6H8Z2 402 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 LRRC14BA6NHZ5 514 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 C2CD4BA6NLJ0 364 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 HUS1O60921 280 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 OR2B3O76000 313 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 SNAPINO95295 136 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 WISP3O95389 354 aaPredicted RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 MBP02144 154 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 FGF2P09038 288 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 STAG3L1P0CL83 205 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 GPD1P21695 349 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 CCNOP22674 350 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 CPT1AP50416 773 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 PRPSAP1Q14558 356 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 CYP27C1Q4G0S4 372 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 RTP2Q5QGT7 225 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 FKBP1CQ5VVH2 108 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 TMEM107Q6UX40 140 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 CENPLQ8N0S6 344 aaPredicted RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 DPP10Q8N608 796 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 ARRDC4Q8NCT1 418 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 CNIH3Q8TBE1 160 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 ASB13Q8WXK3 278 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 GGHQ92820 318 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 KHSRPQ92945 711 aaKnown RBP eCLIP2.83□□□□□ -1.965e-7■■■■□ 21.7
CHD9-218ENST00000566029 MYDGFQ969H8 173 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 AHCYL2Q96HN2 611 aaKnown RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 RTP3Q9BQQ7 232 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 MS4A7Q9GZW8 240 aaPredicted RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 OR51V1Q9H2C8 321 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 LTB4R2Q9NPC1 389 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 PURGQ9UJV8 347 aaKnown RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 LSM2Q9Y333 95 aaKnown RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 NPFFR2Q9Y5X5 522 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 ACTL7AQ9Y615 435 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 A8MVJ9 347 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 K7ERI5 159 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 BCKDKO14874 412 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 INPP4BO15327 924 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 FSTP19883 344 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 RPS3P23396 243 aaKnown RBP eCLIP2.83□□□□□ -1.96
CHD9-218ENST00000566029 FMO3P31513 532 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 HIBADHP31937 336 aaKnown RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 MICAQ29983 383 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 KLHL22Q53GT1 634 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 ZNF789Q5FWF6 425 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 NOL9Q5SY16 702 aaKnown RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 HES5Q5TA89 166 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 RAB12Q6IQ22 244 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 ZNF836Q6ZNA1 936 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 TAS1R3Q7RTX0 852 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 CYP4Z1Q86W10 505 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 FAM86B1Q8N7N1 296 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 MOCOSQ96EN8 888 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 GPR22Q99680 433 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 NLNQ9BYT8 704 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 ZCCHC2Q9C0B9 1178 aaKnown RBP2.83□□□□□ -1.96
CHD9-218ENST00000566029 NT5MQ9NPB1 228 aa2.83□□□□□ -1.96
CHD9-218ENST00000566029 SLCO1C1Q9NYB5 712 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms