RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 CBX6O95503 412 aa12.08□□□□□ -0.48
SF3B3-206ENST00000565990 EBLN1P0CF75 366 aa12.08□□□□□ -0.48
SF3B3-206ENST00000565990 FGF3P11487 239 aaPredicted RBP12.08□□□□□ -0.48
SF3B3-206ENST00000565990 ALOX15P16050 662 aaPredicted RBP12.08□□□□□ -0.48
SF3B3-206ENST00000565990 SERPINB3P29508 390 aa12.08□□□□□ -0.48
SF3B3-206ENST00000565990 CSTF2P33240 577 aaKnown RBP eCLIP12.08□□□□□ -0.48
SF3B3-206ENST00000565990 GALNT1Q10472 559 aaPredicted RBP12.08□□□□□ -0.48
SF3B3-206ENST00000565990 BST1Q10588 318 aa12.08□□□□□ -0.48
SF3B3-206ENST00000565990 ASPHQ12797 758 aa12.08□□□□□ -0.48
SF3B3-206ENST00000565990 SF3A3Q12874 501 aaKnown RBP eCLIP12.08□□□□□ -0.482e-9■■■■□ 25.3
SF3B3-206ENST00000565990 CHIT1Q13231 466 aa12.08□□□□□ -0.48
SF3B3-206ENST00000565990 STX3Q13277 289 aa12.08□□□□□ -0.48
SF3B3-206ENST00000565990 DOC2AQ14183 400 aa12.08□□□□□ -0.48
SF3B3-206ENST00000565990 IL11RAQ14626 422 aa12.08□□□□□ -0.48
SF3B3-206ENST00000565990 ZC3H12BQ5HYM0 836 aaKnown RBP12.08□□□□□ -0.48
SF3B3-206ENST00000565990 TMTC4Q5T4D3 741 aa12.08□□□□□ -0.48
SF3B3-206ENST00000565990 AAGABQ6PD74 315 aa12.08□□□□□ -0.48
SF3B3-206ENST00000565990 RNF44Q7L0R7 432 aa12.08□□□□□ -0.48
SF3B3-206ENST00000565990 RAB11FIP2Q7L804 512 aa12.08□□□□□ -0.48
SF3B3-206ENST00000565990 SNX31Q8N9S9 440 aa12.08□□□□□ -0.48
SF3B3-206ENST00000565990 WDR36Q8NI36 951 aaKnown RBP12.08□□□□□ -0.48
SF3B3-206ENST00000565990 ZNF501Q96CX3 271 aaPredicted RBP12.08□□□□□ -0.48
SF3B3-206ENST00000565990 TM4SF19Q96DZ7 209 aa12.08□□□□□ -0.48
SF3B3-206ENST00000565990 THAP11Q96EK4 314 aa12.08□□□□□ -0.48
SF3B3-206ENST00000565990 NSUN5Q96P11 429 aaKnown RBP12.08□□□□□ -0.48
SF3B3-206ENST00000565990 KLHL25Q9H0H3 589 aa12.08□□□□□ -0.48
SF3B3-206ENST00000565990 DENND2DQ9H6A0 471 aaPredicted RBP12.08□□□□□ -0.48
SF3B3-206ENST00000565990 NOL11Q9H8H0 719 aaKnown RBP12.08□□□□□ -0.48
SF3B3-206ENST00000565990 SYNPO2LQ9H987 977 aa12.08□□□□□ -0.48
SF3B3-206ENST00000565990 MRGBPQ9NV56 204 aa12.08□□□□□ -0.48
SF3B3-206ENST00000565990 ARL8BQ9NVJ2 186 aa12.08□□□□□ -0.48
SF3B3-206ENST00000565990 DCTN4Q9UJW0 460 aa12.08□□□□□ -0.48
SF3B3-206ENST00000565990 ANGPTL2Q9UKU9 493 aa12.08□□□□□ -0.48
SF3B3-206ENST00000565990 PLCL2Q9UPR0 1127 aa12.08□□□□□ -0.48
SF3B3-206ENST00000565990 TSC22D4Q9Y3Q8 395 aa12.08□□□□□ -0.48
SF3B3-206ENST00000565990 SPTBP11277 2137 aa12.08□□□□□ -0.48
SF3B3-206ENST00000565990 TRBC2A0A5B9 178 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 A8MUI8 341 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 NRP2O60462 931 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 NPHS1O60500 1241 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 FKBP6O75344 327 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 CIB2O75838 187 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 MLYCDO95822 493 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 SERPINE1P05121 402 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 FGF5P12034 268 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 CCL4P13236 92 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 CD22P20273 847 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 CXCR2P25025 360 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 VARSP26640 1264 aaKnown RBP12.07□□□□□ -0.48
SF3B3-206ENST00000565990 SERPINB5P36952 375 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 CDH13P55290 713 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 SH3BP2P78314 561 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 IRF8Q02556 426 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 ACY1Q03154 408 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 LAPTM5Q13571 262 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 KCNAB1Q14722 419 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 GSTA3Q16772 222 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 XKR6Q5GH73 641 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 MANEAQ5SRI9 462 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 IGF2-ASQ6U949 168 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 FRMD7Q6ZUT3 714 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 RPS27LQ71UM5 84 aaKnown RBP12.07□□□□□ -0.48
SF3B3-206ENST00000565990 DGLUCYQ7Z3D6 616 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 MCATQ8IVS2 390 aaKnown RBP12.07□□□□□ -0.48
SF3B3-206ENST00000565990 LAS2Q8IYD9 372 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 LSMEM2Q8N112 164 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 MFSD9Q8NBP5 474 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 OR52B6Q8NGF0 335 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 OR8K5Q8NH50 307 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 STMN2Q93045 179 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 ZNF570Q96NI8 536 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 FCRL4Q96PJ5 515 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 ZFYVE21Q9BQ24 234 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 AIF1LQ9BQI0 150 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 TRMOQ9BU70 441 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 EFCAB11Q9BUY7 163 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 MECRQ9BV79 373 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 NRSN2Q9GZP1 204 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 SEMA4BQ9NPR2 832 aaPredicted RBP12.07□□□□□ -0.48
SF3B3-206ENST00000565990 TAS2R1Q9NYW7 299 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 AKAP7Q9P0M2 348 aaPredicted RBP12.07□□□□□ -0.48
SF3B3-206ENST00000565990 ZNF225Q9UK10 706 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 LRCH1Q9Y2L9 728 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 ANGPTL3Q9Y5C1 460 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 PCDHGA8Q9Y5G5 932 aa12.07□□□□□ -0.48
SF3B3-206ENST00000565990 A0A1B0GTL3 188 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 WDR91A4D1P6 747 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 FAM149AA5PLN7 773 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 EFCAB7A8K855 629 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 H0YIV9 168 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 UBFD1O14562 309 aaKnown RBP12.06□□□□□ -0.48
SF3B3-206ENST00000565990 HAT1O14929 419 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 SLC22A2O15244 555 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 CLDN9O95484 217 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 OTCP00480 354 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 GRK3P35626 688 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 AHRP35869 848 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 HNF4AP41235 474 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 GCGRP47871 477 aa12.06□□□□□ -0.48
SF3B3-206ENST00000565990 ARL4DP49703 201 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms