RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 FAM53BQ14153 422 aa13.16□□□□□ -0.3
HERPUD1-210ENST00000565966 RASA2Q15283 850 aa13.16□□□□□ -0.3
HERPUD1-210ENST00000565966 NKG7Q16617 165 aa13.16□□□□□ -0.3
HERPUD1-210ENST00000565966 NDUFA9Q16795 377 aa13.16□□□□□ -0.3
HERPUD1-210ENST00000565966 NXPE4Q6UWF7 544 aa13.16□□□□□ -0.3
HERPUD1-210ENST00000565966 COX15Q7KZN9 410 aa13.16□□□□□ -0.3
HERPUD1-210ENST00000565966 VN1R4Q7Z5H5 301 aa13.16□□□□□ -0.3
HERPUD1-210ENST00000565966 TMPRSS11BQ86T26 416 aa13.16□□□□□ -0.3
HERPUD1-210ENST00000565966 CNPY4Q8N129 248 aa13.16□□□□□ -0.3
HERPUD1-210ENST00000565966 METTL27Q8N6F8 245 aaPredicted RBP13.16□□□□□ -0.3
HERPUD1-210ENST00000565966 CAMKVQ8NCB2 501 aa13.16□□□□□ -0.3
HERPUD1-210ENST00000565966 ZNF740Q8NDX6 193 aa13.16□□□□□ -0.3
HERPUD1-210ENST00000565966 OR2W6PQ8NHA6 318 aa13.16□□□□□ -0.3
HERPUD1-210ENST00000565966 EPS8L3Q8TE67 593 aaKnown RBP13.16□□□□□ -0.3
HERPUD1-210ENST00000565966 UBTD2Q8WUN7 234 aa13.16□□□□□ -0.3
HERPUD1-210ENST00000565966 COL26A1Q96A83 441 aa13.16□□□□□ -0.3
HERPUD1-210ENST00000565966 TM4SF19Q96DZ7 209 aa13.16□□□□□ -0.3
HERPUD1-210ENST00000565966 SCYL1Q96KG9 808 aa13.16□□□□□ -0.3
HERPUD1-210ENST00000565966 IP6K3Q96PC2 410 aa13.16□□□□□ -0.3
HERPUD1-210ENST00000565966 CD244Q9BZW8 370 aa13.16□□□□□ -0.3
HERPUD1-210ENST00000565966 SLC25A18Q9H1K4 315 aa13.16□□□□□ -0.3
HERPUD1-210ENST00000565966 WDR54Q9H977 334 aa13.16□□□□□ -0.3
HERPUD1-210ENST00000565966 DNAJC11Q9NVH1 559 aa13.16□□□□□ -0.3
HERPUD1-210ENST00000565966 MAU2Q9Y6X3 613 aa13.16□□□□□ -0.3
HERPUD1-210ENST00000565966 A0A1W2PPM1 405 aa13.15□□□□□ -0.3
HERPUD1-210ENST00000565966 TRBC2A0A5B9 178 aa13.15□□□□□ -0.3
HERPUD1-210ENST00000565966 SMIM23A6NLE4 172 aa13.15□□□□□ -0.3
HERPUD1-210ENST00000565966 PRPF4O43172 522 aaKnown RBP eCLIP13.15□□□□□ -0.3
HERPUD1-210ENST00000565966 KLK8O60259 260 aa13.15□□□□□ -0.3
HERPUD1-210ENST00000565966 CCNT2O60583 730 aaKnown RBP13.15□□□□□ -0.3
HERPUD1-210ENST00000565966 RBP1P09455 135 aa13.15□□□□□ -0.3
HERPUD1-210ENST00000565966 NUDT17P0C025 328 aa13.15□□□□□ -0.3
HERPUD1-210ENST00000565966 GNAZP19086 355 aa13.15□□□□□ -0.3
HERPUD1-210ENST00000565966 OTX2P32243 289 aa13.15□□□□□ -0.3
HERPUD1-210ENST00000565966 REEP5Q00765 189 aa13.15□□□□□ -0.3
HERPUD1-210ENST00000565966 SETDB1Q15047 1291 aa13.15□□□□□ -0.3
HERPUD1-210ENST00000565966 SLCO4C1Q6ZQN7 724 aa13.15□□□□□ -0.3
HERPUD1-210ENST00000565966 LRRC70Q7Z2Q7 622 aa13.15□□□□□ -0.3
HERPUD1-210ENST00000565966 CYP4X1Q8N118 509 aa13.15□□□□□ -0.3
HERPUD1-210ENST00000565966 ZNF843Q8N446 348 aa13.15□□□□□ -0.3
HERPUD1-210ENST00000565966 ARHGEF39Q8N4T4 335 aa13.15□□□□□ -0.3
HERPUD1-210ENST00000565966 MREGQ8N565 214 aa13.15□□□□□ -0.3
HERPUD1-210ENST00000565966 DTWD1Q8N5C7 304 aa13.15□□□□□ -0.3
HERPUD1-210ENST00000565966 TBC1D19Q8N5T2 526 aa13.15□□□□□ -0.3
HERPUD1-210ENST00000565966 TMEM102Q8N9M5 508 aaPredicted RBP13.15□□□□□ -0.3
HERPUD1-210ENST00000565966 SNX31Q8N9S9 440 aa13.15□□□□□ -0.3
HERPUD1-210ENST00000565966 MFSD9Q8NBP5 474 aa13.15□□□□□ -0.3
HERPUD1-210ENST00000565966 ACMSDQ8TDX5 336 aa13.15□□□□□ -0.3
HERPUD1-210ENST00000565966 NACC2Q96BF6 587 aa13.15□□□□□ -0.3
HERPUD1-210ENST00000565966 CAPS2Q9BXY5 557 aa13.15□□□□□ -0.3
HERPUD1-210ENST00000565966 ACSS2Q9NR19 701 aa13.15□□□□□ -0.3
HERPUD1-210ENST00000565966 GPRC5BQ9NZH0 403 aa13.15□□□□□ -0.3
HERPUD1-210ENST00000565966 NXT1Q9UKK6 140 aaKnown RBP13.15□□□□□ -0.3
HERPUD1-210ENST00000565966 SPTA1P02549 2419 aa13.15□□□□□ -0.3
HERPUD1-210ENST00000565966 BOD1L1Q8NFC6 3051 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 ARGFXA6NJG6 315 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 VSTM2BA6NLU5 285 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 FOXO6A8MYZ6 492 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 MKRN2OSH3BPM6 223 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 GOLGA8RI6L899 631 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 FOXS1O43638 330 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 OR1F1O43749 312 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 PRAMEF4O60810 478 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 CDH16O75309 829 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 STATHP02808 62 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 TUBBP07437 444 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 SBK3P0C264 359 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 C1GALT1C1LP0DN25 315 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 PYGBP11216 843 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 GFAPP14136 432 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 EPORP19235 508 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 FBLP22087 321 aaKnown RBP13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 VARSP26640 1264 aaKnown RBP13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 SCTRP47872 440 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 ALDH18A1P54886 795 aaKnown RBP13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 RRADP55042 308 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 SNRPNP63162 240 aaKnown RBP13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 OCA2Q04671 838 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 PDK4Q16654 411 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 PFKFB4Q16877 469 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 PRAMEF9Q5VWM5 478 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 ATG9BQ674R7 924 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 MED25Q71SY5 747 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 ASPGQ86U10 573 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 TMEM151AQ8N4L1 468 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 STT3BQ8TCJ2 826 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 SLC13A3Q8WWT9 602 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 MMABQ96EY8 250 aaPredicted RBP13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 ABHD17AQ96GS6 310 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 SPSB2Q99619 263 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 MACROD1Q9BQ69 325 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 MRPL57Q9BQC6 102 aaKnown RBP13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 AIF1LQ9BQI0 150 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 DRC3Q9H069 523 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 ING2Q9H160 280 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 MRPL46Q9H2W6 279 aaKnown RBP13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 TMEM216Q9P0N5 145 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 CPSF2Q9P2I0 782 aaKnown RBP13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 XPR1Q9UBH6 696 aa13.14□□□□□ -0.31
HERPUD1-210ENST00000565966 OPTCQ9UBM4 332 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms