RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 ZNF7P17097 686 aaPredicted RBP5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 FXR2P51116 673 aaKnown RBP eCLIP5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 CCR6P51684 374 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 RPS8P62241 208 aaKnown RBP5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 NOGQ13253 232 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 HEPACAMQ14CZ8 416 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 LARS2Q15031 903 aaKnown RBP5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 ECM1Q16610 540 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 PKDCCQ504Y2 493 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 COQ5Q5HYK3 327 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 NHSL2Q5HYW2 709 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 EXOSC6Q5RKV6 272 aaKnown RBP5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 SLC9C2Q5TAH2 1124 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 ANKRD22Q5VYY1 191 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 TRAT1Q6PIZ9 186 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 TFAP2EQ6VUC0 442 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 EIF3MQ7L2H7 374 aaKnown RBP5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 BIVMQ86UB2 503 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 C10orf107Q8IVU9 208 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 POU5F2Q8N7G0 328 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 RTL3Q8N8U3 475 aaKnown RBP5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 OR10T2Q8NGX3 314 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 RLN3Q8WXF3 142 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 WFIKKN1Q96NZ8 548 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 SEPT5Q99719 369 aaPredicted RBP5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 SPATA9Q9BWV2 254 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 CADM1Q9BY67 442 aaKnown RBP5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 RNF32Q9H0A6 362 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 WDR41Q9HAD4 459 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 CACNA2D2Q9NY47 1150 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 COLQQ9Y215 455 aaPredicted RBP5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 BTBD3Q9Y2F9 522 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 IRAK3Q9Y616 596 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 USP6P35125 1406 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 AGAP5A6NIR3 686 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 TEX33O43247 280 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 MT-ATP6P00846 226 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 ACPPP15309 386 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 IDH3GP51553 393 aaPredicted RBP5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 CDH11P55287 796 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 VSX2P58304 361 aaPredicted RBP5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 TLE2Q04725 743 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 GAGE1Q13065 139 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 GRAPQ13588 217 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 SLITRK4Q8IW52 837 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 CMIPQ8IY22 773 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 CENPLQ8N0S6 344 aaPredicted RBP5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 TDRD5Q8NAT2 981 aaKnown RBP5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 OR6F1Q8NGZ6 308 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 C1orf216Q8TAB5 229 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 TOP1MTQ969P6 601 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 RRNAD1Q96FB5 475 aaKnown RBP5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 CDCA3Q99618 268 aaPredicted RBP5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 EBNA1BP2Q99848 306 aaKnown RBP5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 AIF1LQ9BQI0 150 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 SEPT9Q9UHD8 586 aaPredicted RBP5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 NDRG2Q9UN36 371 aaKnown RBP5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 CYP8B1Q9UNU6 501 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 BOLA1Q9Y3E2 137 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 TAF6LQ9Y6J9 622 aa5.76□□□□□ -1.49
TUBGCP4-207ENST00000563963 ZNF609O15014 1411 aa5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 SF3B1O75533 1304 aaKnown RBP eCLIP5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 MYH13Q9UKX3 1938 aa5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 A0A1B0GV72 72 aa5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 SERPINE3A8MV23 424 aa5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 BUD23O43709 281 aaKnown RBP5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 BANF1O75531 89 aa5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 DDNO94850 711 aaPredicted RBP5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 PVALBP20472 110 aaPredicted RBP5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 AKAP5P24588 427 aa5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 APEX1P27695 318 aaKnown RBP5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 DCKP27707 260 aa5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 ACTBP60709 375 aa5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 ACTA2P62736 377 aa5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 ACTG1P63261 375 aa5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 ACTG2P63267 376 aa5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 ACTC1P68032 377 aa5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 ACTA1P68133 377 aa5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 HFEQ30201 348 aa5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 TIGD3Q6B0B8 471 aa5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 FAM111BQ6SJ93 734 aa5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 MOXD1Q6UVY6 613 aa5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 SPNS3Q6ZMD2 512 aa5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 PXKQ7Z7A4 578 aa5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 S100A7AQ86SG5 101 aa5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 ZC3HC1Q86WB0 502 aaKnown RBP5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 ECHDC2Q86YB7 292 aa5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 ADAMTS15Q8TE58 950 aa5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 RAB2BQ8WUD1 216 aa5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 TMEM203Q969S6 136 aa5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 NSUN4Q96CB9 384 aaKnown RBP5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 CPPED1Q9BRF8 314 aaPredicted RBP5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 ANO3Q9BYT9 981 aa5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 TOLLIPQ9H0E2 274 aa5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 NIPAL2Q9H841 368 aa5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 ZNF430Q9H8G1 570 aaPredicted RBP5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 ZNF302Q9NR11 478 aa5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 MRPL22Q9NWU5 206 aaKnown RBP5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 GSKIPQ9P0R6 139 aa5.75□□□□□ -1.49
TUBGCP4-207ENST00000563963 EPHA6Q9UF33 1036 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms