RNA–Protein interactions for RNA: ENST00000563065.5

CCNDBP1-204, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-204ENST00000563065 CXADRP78310 365 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 DNASE1L3Q13609 305 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 COL28A1Q2UY09 1125 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 NKAIN1Q4KMZ8 207 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 ARHGAP40Q5TG30 622 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 MLIPQ5VWP3 458 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 PRSS41Q7RTY9 318 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.61■□□□□ 0.252e-6■■■■■ 163.7
CCNDBP1-204ENST00000563065 ZCCHC10Q8TBK6 192 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 PROKR1Q8TCW9 393 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 KIAA1143Q96AT1 154 aaPredicted RBP16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 PTCD3Q96EY7 689 aaKnown RBP16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 IPPKQ9H8X2 491 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 ZBTB26Q9HCK0 441 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 ZFP69BQ9UJL9 534 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 PCTPQ9UKL6 214 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 TNPO3Q9Y5L0 923 aaKnown RBP16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 CCDC88CQ9P219 2028 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 G3V2L1 256 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 STX16-NPEPL1H3BU86 382 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 OR7A17O14581 309 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 STX16O14662 325 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 FFAR3O14843 346 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 NKX2-8O15522 239 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 GPR42O15529 346 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 NDUFS4O43181 175 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 FOXS1O43638 330 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 CNOT3O75175 753 aaKnown RBP16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 B3GALT4O96024 378 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 TSPAN8P19075 237 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 AGXTP21549 392 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 HNF4AP41235 474 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 CDH13P55290 713 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 MUM1Q2TAK8 710 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 ATP1A1-AS1Q5TC04 95 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 YOD1Q5VVQ6 348 aaPredicted RBP16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 TMIGD1Q6UXZ0 262 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 CNPY4Q8N129 248 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 ENDOVQ8N8Q3 282 aaKnown RBP16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 BANPQ8N9N5 519 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 CAMKVQ8NCB2 501 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 CREB3L4Q8TEY5 395 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 WDR34Q96EX3 536 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 CDK15Q96Q40 435 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 AICDAQ9GZX7 198 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 CENPHQ9H3R5 247 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 EHD1Q9H4M9 534 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 NOL11Q9H8H0 719 aaKnown RBP16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 SCN3AQ9NY46 2000 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 GRID1Q9ULK0 1009 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 TMCO1Q9UM00 188 aa16.61■□□□□ 0.25
CCNDBP1-204ENST00000563065 A0A0A6YYC8 382 aaPredicted RBP16.6■□□□□ 0.25
CCNDBP1-204ENST00000563065 A0A1B0GTL3 188 aa16.6■□□□□ 0.25
CCNDBP1-204ENST00000563065 I3L1I5 382 aaPredicted RBP16.6■□□□□ 0.25
CCNDBP1-204ENST00000563065 TXNDC9O14530 226 aa16.6■□□□□ 0.25
CCNDBP1-204ENST00000563065 PLIN3O60664 434 aa16.6■□□□□ 0.25
CCNDBP1-204ENST00000563065 TAC1P20366 129 aa16.6■□□□□ 0.25
CCNDBP1-204ENST00000563065 AHRP35869 848 aa16.6■□□□□ 0.25
CCNDBP1-204ENST00000563065 CASP2P42575 452 aa16.6■□□□□ 0.25
CCNDBP1-204ENST00000563065 HYAL2Q12891 473 aa16.6■□□□□ 0.25
CCNDBP1-204ENST00000563065 UNC50Q53HI1 259 aa16.6■□□□□ 0.25
CCNDBP1-204ENST00000563065 TMEM214Q6NUQ4 689 aaKnown RBP16.6■□□□□ 0.25
CCNDBP1-204ENST00000563065 COX15Q7KZN9 410 aa16.6■□□□□ 0.25
CCNDBP1-204ENST00000563065 VN1R5Q7Z5H4 357 aa16.6■□□□□ 0.25
CCNDBP1-204ENST00000563065 KRT78Q8N1N4 520 aa16.6■□□□□ 0.25
CCNDBP1-204ENST00000563065 TBC1D19Q8N5T2 526 aa16.6■□□□□ 0.25
CCNDBP1-204ENST00000563065 MYRIPQ8NFW9 859 aa16.6■□□□□ 0.25
CCNDBP1-204ENST00000563065 OR52B6Q8NGF0 335 aa16.6■□□□□ 0.25
CCNDBP1-204ENST00000563065 NLNQ9BYT8 704 aa16.6■□□□□ 0.25
CCNDBP1-204ENST00000563065 KLHL31Q9H511 634 aa16.6■□□□□ 0.25
CCNDBP1-204ENST00000563065 ACTL8Q9H568 366 aa16.6■□□□□ 0.25
CCNDBP1-204ENST00000563065 SEMA4BQ9NPR2 832 aaPredicted RBP16.6■□□□□ 0.25
CCNDBP1-204ENST00000563065 IFT80Q9P2H3 777 aaPredicted RBP16.6■□□□□ 0.25
CCNDBP1-204ENST00000563065 FARSAQ9Y285 508 aaKnown RBP16.6■□□□□ 0.25
CCNDBP1-204ENST00000563065 RNF11Q9Y3C5 154 aa16.6■□□□□ 0.25
CCNDBP1-204ENST00000563065 CACNA1BQ00975 2339 aa16.6■□□□□ 0.25
CCNDBP1-204ENST00000563065 NBEAQ8NFP9 2946 aa16.59■□□□□ 0.25
CCNDBP1-204ENST00000563065 K7ENP7 123 aa16.59■□□□□ 0.25
CCNDBP1-204ENST00000563065 RGS16O15492 202 aaPredicted RBP16.59■□□□□ 0.25
CCNDBP1-204ENST00000563065 RPS17P08708 135 aaKnown RBP16.59■□□□□ 0.25
CCNDBP1-204ENST00000563065 IL1RNP18510 177 aa16.59■□□□□ 0.25
CCNDBP1-204ENST00000563065 ATP5F1P24539 256 aaPredicted RBP16.59■□□□□ 0.25
CCNDBP1-204ENST00000563065 CXCR2P25025 360 aa16.59■□□□□ 0.25
CCNDBP1-204ENST00000563065 PTPN4P29074 926 aa16.59■□□□□ 0.25
CCNDBP1-204ENST00000563065 EMP3P54852 163 aa16.59■□□□□ 0.25
CCNDBP1-204ENST00000563065 TMPRSS3P57727 454 aa16.59■□□□□ 0.25
CCNDBP1-204ENST00000563065 E2F2Q14209 437 aa16.59■□□□□ 0.25
CCNDBP1-204ENST00000563065 TBCCQ15814 346 aa16.59■□□□□ 0.25
CCNDBP1-204ENST00000563065 SYT16Q17RD7 645 aa16.59■□□□□ 0.25
CCNDBP1-204ENST00000563065 ZNF678Q5SXM1 525 aa16.59■□□□□ 0.25
CCNDBP1-204ENST00000563065 GARNL3Q5VVW2 1013 aa16.59■□□□□ 0.25
CCNDBP1-204ENST00000563065 INO80CQ6PI98 192 aaPredicted RBP16.59■□□□□ 0.25
CCNDBP1-204ENST00000563065 MYLK4Q86YV6 388 aaPredicted RBP16.59■□□□□ 0.25
CCNDBP1-204ENST00000563065 RNF175Q8N4F7 328 aa16.59■□□□□ 0.25
CCNDBP1-204ENST00000563065 OR9A4Q8NGU2 314 aa16.59■□□□□ 0.25
CCNDBP1-204ENST00000563065 STARD8Q92502 1023 aa16.59■□□□□ 0.25
CCNDBP1-204ENST00000563065 CCT6BQ92526 530 aa16.59■□□□□ 0.25
CCNDBP1-204ENST00000563065 COL26A1Q96A83 441 aa16.59■□□□□ 0.25
CCNDBP1-204ENST00000563065 MMABQ96EY8 250 aaPredicted RBP16.59■□□□□ 0.25
CCNDBP1-204ENST00000563065 SLC45A3Q96JT2 553 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms